RNA–Protein interactions for RNA: ENST00000554078.1

AC004858.1-201, humanhuman

BASIC

Gene AC004858.1, Length 242 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004858.1-201ENST00000554078 IFT57Q9NWB7 429 aa12.88□□□□□ -0.35
AC004858.1-201ENST00000554078 ANKRD31Q8N7Z5 1873 aa12.88□□□□□ -0.35
AC004858.1-201ENST00000554078 ABCC12Q96J65 1359 aa12.87□□□□□ -0.35
AC004858.1-201ENST00000554078 IBTKQ9P2D0 1353 aaPredicted RBP12.87□□□□□ -0.35
AC004858.1-201ENST00000554078 FKBP4Q02790 459 aaKnown RBP eCLIP12.87□□□□□ -0.35
AC004858.1-201ENST00000554078 ANKRD13DQ6ZTN6 518 aa12.87□□□□□ -0.35
AC004858.1-201ENST00000554078 NLRP10Q86W26 655 aa12.87□□□□□ -0.35
AC004858.1-201ENST00000554078 RBM17Q96I25 401 aaKnown RBP12.87□□□□□ -0.35
AC004858.1-201ENST00000554078 CRAMP1Q96RY5 1269 aa12.87□□□□□ -0.35
AC004858.1-201ENST00000554078 HYPKQ9NX55 129 aa12.87□□□□□ -0.35
AC004858.1-201ENST00000554078 DLEC1Q9Y238 1755 aa12.86□□□□□ -0.35
AC004858.1-201ENST00000554078 CC2D2BQ6DHV5 1058 aa12.86□□□□□ -0.35
AC004858.1-201ENST00000554078 SYNE4Q8N205 404 aa12.86□□□□□ -0.35
AC004858.1-201ENST00000554078 PLBD2Q8NHP8 589 aa12.86□□□□□ -0.35
AC004858.1-201ENST00000554078 ZNF277Q9NRM2 450 aaPredicted RBP12.86□□□□□ -0.35
AC004858.1-201ENST00000554078 LAMB4A4D0S4 1761 aa12.86□□□□□ -0.35
AC004858.1-201ENST00000554078 POTECB2RU33 542 aa12.85□□□□□ -0.35
AC004858.1-201ENST00000554078 ELL2O00472 640 aaPredicted RBP12.85□□□□□ -0.35
AC004858.1-201ENST00000554078 ANP32CO43423 234 aa12.85□□□□□ -0.35
AC004858.1-201ENST00000554078 DDNO94850 711 aaPredicted RBP12.85□□□□□ -0.35
AC004858.1-201ENST00000554078 GRIPAP1Q4V328 841 aa12.85□□□□□ -0.35
AC004858.1-201ENST00000554078 C3orf67Q6ZVT6 689 aa12.85□□□□□ -0.35
AC004858.1-201ENST00000554078 SMC1BQ8NDV3 1235 aa12.85□□□□□ -0.35
AC004858.1-201ENST00000554078 TRMT112Q9UI30 125 aaKnown RBP12.85□□□□□ -0.35
AC004858.1-201ENST00000554078 RNF123Q5XPI4 1314 aa12.85□□□□□ -0.35
AC004858.1-201ENST00000554078 SLX4Q8IY92 1834 aa12.84□□□□□ -0.35
AC004858.1-201ENST00000554078 C8orf58Q8NAV2 365 aa12.84□□□□□ -0.35
AC004858.1-201ENST00000554078 PSMD1Q99460 953 aa12.84□□□□□ -0.35
AC004858.1-201ENST00000554078 CHMP4AQ9BY43 222 aa12.84□□□□□ -0.35
AC004858.1-201ENST00000554078 COL11A2P13942 1736 aaPredicted RBP12.84□□□□□ -0.35
AC004858.1-201ENST00000554078 SBF1O95248 1867 aa12.84□□□□□ -0.35
AC004858.1-201ENST00000554078 RIC1Q4ADV7 1423 aa12.83□□□□□ -0.36
AC004858.1-201ENST00000554078 TCERG1O14776 1098 aaKnown RBP12.83□□□□□ -0.36
AC004858.1-201ENST00000554078 HCLS1P14317 486 aaPredicted RBP12.83□□□□□ -0.36
AC004858.1-201ENST00000554078 IARSP41252 1262 aaKnown RBP12.83□□□□□ -0.36
AC004858.1-201ENST00000554078 CCDC27Q2M243 656 aa12.83□□□□□ -0.36
AC004858.1-201ENST00000554078 DNAJC5GQ8N7S2 189 aa12.83□□□□□ -0.36
AC004858.1-201ENST00000554078 TMX4Q9H1E5 349 aaPredicted RBP12.83□□□□□ -0.36
AC004858.1-201ENST00000554078 MRS2Q9HD23 443 aa12.83□□□□□ -0.36
AC004858.1-201ENST00000554078 SH3TC1Q8TE82 1336 aa12.83□□□□□ -0.36
AC004858.1-201ENST00000554078 ATP5J2-PTCD1G3V325 749 aa12.82□□□□□ -0.36
AC004858.1-201ENST00000554078 PPEF1O14829 653 aaPredicted RBP12.82□□□□□ -0.36
AC004858.1-201ENST00000554078 BBOX1O75936 387 aa12.82□□□□□ -0.36
AC004858.1-201ENST00000554078 ISCA1Q9BUE6 129 aa12.82□□□□□ -0.36
AC004858.1-201ENST00000554078 ATP6V0A2Q9Y487 856 aa12.82□□□□□ -0.36
AC004858.1-201ENST00000554078 TRIM28Q13263 835 aaKnown RBP12.81□□□□□ -0.36
AC004858.1-201ENST00000554078 NCBP3Q53F19 620 aaKnown RBP12.81□□□□□ -0.36
AC004858.1-201ENST00000554078 RIC3Q7Z5B4 369 aa12.81□□□□□ -0.36
AC004858.1-201ENST00000554078 WWC1Q8IX03 1113 aa12.81□□□□□ -0.36
AC004858.1-201ENST00000554078 JDP2Q8WYK2 163 aa12.81□□□□□ -0.36
AC004858.1-201ENST00000554078 ZNF428Q96B54 188 aa12.81□□□□□ -0.36
AC004858.1-201ENST00000554078 PHAXQ9H814 394 aaKnown RBP12.81□□□□□ -0.36
AC004858.1-201ENST00000554078 IQCA1LA6NCM1 817 aa12.8□□□□□ -0.36
AC004858.1-201ENST00000554078 FZD9O00144 591 aa12.8□□□□□ -0.36
AC004858.1-201ENST00000554078 GOLGA2Q08379 1002 aa12.8□□□□□ -0.36
AC004858.1-201ENST00000554078 CCDC30Q5VVM6 783 aa12.8□□□□□ -0.36
AC004858.1-201ENST00000554078 DDX46Q7L014 1031 aaKnown RBP12.8□□□□□ -0.36
AC004858.1-201ENST00000554078 SP8Q8IXZ3 490 aa12.8□□□□□ -0.36
AC004858.1-201ENST00000554078 FAM89AQ96GI7 184 aa12.8□□□□□ -0.36
AC004858.1-201ENST00000554078 L3MBTL3Q96JM7 780 aaPredicted RBP12.8□□□□□ -0.36
AC004858.1-201ENST00000554078 NUP98P52948 1817 aa12.8□□□□□ -0.36
AC004858.1-201ENST00000554078 FER1L6Q2WGJ9 1857 aa12.8□□□□□ -0.36
AC004858.1-201ENST00000554078 TSPYL6Q8N831 410 aa12.79□□□□□ -0.36
AC004858.1-201ENST00000554078 TSR2Q969E8 191 aaKnown RBP12.79□□□□□ -0.36
AC004858.1-201ENST00000554078 ABCC4O15439 1325 aa12.79□□□□□ -0.36
AC004858.1-201ENST00000554078 EIF6P56537 245 aaKnown RBP12.78□□□□□ -0.36
AC004858.1-201ENST00000554078 HTRA3P83110 453 aa12.78□□□□□ -0.36
AC004858.1-201ENST00000554078 SLC51AQ86UW1 340 aa12.78□□□□□ -0.36
AC004858.1-201ENST00000554078 GPC2Q8N158 579 aa12.78□□□□□ -0.36
AC004858.1-201ENST00000554078 LARGE2Q8N3Y3 721 aa12.78□□□□□ -0.36
AC004858.1-201ENST00000554078 VPS33BQ9H267 617 aa12.78□□□□□ -0.36
AC004858.1-201ENST00000554078 TAF1DQ9H5J8 278 aaPredicted RBP12.78□□□□□ -0.36
AC004858.1-201ENST00000554078 ZNF541Q9H0D2 1346 aa12.78□□□□□ -0.36
AC004858.1-201ENST00000554078 SNED1Q8TER0 1413 aa12.78□□□□□ -0.36
AC004858.1-201ENST00000554078 TNRC6CQ9HCJ0 1690 aaKnown RBP12.77□□□□□ -0.36
AC004858.1-201ENST00000554078 DDX58O95786 925 aaKnown RBP12.77□□□□□ -0.37
AC004858.1-201ENST00000554078 GRAPQ13588 217 aa12.77□□□□□ -0.37
AC004858.1-201ENST00000554078 SF3B3Q15393 1217 aaKnown RBP12.77□□□□□ -0.37
AC004858.1-201ENST00000554078 RTL5Q5HYW3 569 aaPredicted RBP12.77□□□□□ -0.37
AC004858.1-201ENST00000554078 CHADLQ6NUI6 762 aa12.77□□□□□ -0.37
AC004858.1-201ENST00000554078 MPNDQ8N594 471 aa12.77□□□□□ -0.37
AC004858.1-201ENST00000554078 SUPT20HQ8NEM7 779 aa12.77□□□□□ -0.37
AC004858.1-201ENST00000554078 GRAPLQ8TC17 118 aaPredicted RBP12.77□□□□□ -0.37
AC004858.1-201ENST00000554078 RTFDC1Q9BY42 306 aaPredicted RBP12.77□□□□□ -0.37
AC004858.1-201ENST00000554078 HACL1Q9UJ83 578 aa12.77□□□□□ -0.37
AC004858.1-201ENST00000554078 IL16Q14005 1332 aa12.77□□□□□ -0.37
AC004858.1-201ENST00000554078 IRS4O14654 1257 aaPredicted RBP12.76□□□□□ -0.37
AC004858.1-201ENST00000554078 POTEIP0CG38 1075 aa12.76□□□□□ -0.37
AC004858.1-201ENST00000554078 POTEJP0CG39 1038 aa12.76□□□□□ -0.37
AC004858.1-201ENST00000554078 HSP90B1P14625 803 aaKnown RBP12.76□□□□□ -0.37
AC004858.1-201ENST00000554078 DPP8Q6V1X1 898 aaPredicted RBP12.76□□□□□ -0.37
AC004858.1-201ENST00000554078 TMC4Q7Z404 712 aa12.76□□□□□ -0.37
AC004858.1-201ENST00000554078 ZBTB38Q8NAP3 1195 aaPredicted RBP12.76□□□□□ -0.37
AC004858.1-201ENST00000554078 CCDC191Q8NCU4 936 aa12.76□□□□□ -0.37
AC004858.1-201ENST00000554078 MYD88Q99836 296 aa12.76□□□□□ -0.37
AC004858.1-201ENST00000554078 STK31Q9BXU1 1019 aa12.76□□□□□ -0.37
AC004858.1-201ENST00000554078 SALL2Q9Y467 1007 aaPredicted RBP12.76□□□□□ -0.37
AC004858.1-201ENST00000554078 PPIP5K2O43314 1243 aa12.75□□□□□ -0.37
AC004858.1-201ENST00000554078 EPHX2P34913 555 aa12.75□□□□□ -0.37
AC004858.1-201ENST00000554078 AOC3Q16853 763 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms