RNA–Protein interactions for RNA: ENST00000553747.5

LINC00648-201, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-201ENST00000553747 SSBP4Q9BWG4 385 aaPredicted RBP6.8□□□□□ -1.32
LINC00648-201ENST00000553747 KCNH4Q9UQ05 1017 aa6.8□□□□□ -1.32
LINC00648-201ENST00000553747 HCN4Q9Y3Q4 1203 aa6.8□□□□□ -1.32
LINC00648-201ENST00000553747 SERTM1A2A2V5 107 aa6.79□□□□□ -1.32
LINC00648-201ENST00000553747 A6NJR5 290 aa6.79□□□□□ -1.32
LINC00648-201ENST00000553747 LZTS3O60299 673 aaPredicted RBP6.79□□□□□ -1.32
LINC00648-201ENST00000553747 SLC6A14Q9UN76 642 aa6.79□□□□□ -1.32
LINC00648-201ENST00000553747 NOD1Q9Y239 953 aa6.79□□□□□ -1.32
LINC00648-201ENST00000553747 MCTP1Q6DN14 999 aa6.78□□□□□ -1.32
LINC00648-201ENST00000553747 FNBP4Q8N3X1 1017 aaPredicted RBP6.78□□□□□ -1.32
LINC00648-201ENST00000553747 ADAMTS19Q8TE59 1207 aa6.78□□□□□ -1.32
LINC00648-201ENST00000553747 USP17L5A8MUK1 530 aa6.77□□□□□ -1.33
LINC00648-201ENST00000553747 AFF1P51825 1210 aaKnown RBP6.77□□□□□ -1.33
LINC00648-201ENST00000553747 TYRO3Q06418 890 aa6.77□□□□□ -1.33
LINC00648-201ENST00000553747 NCOA4Q13772 614 aa6.77□□□□□ -1.33
LINC00648-201ENST00000553747 PSAPL1Q6NUJ1 521 aa6.77□□□□□ -1.33
LINC00648-201ENST00000553747 FMR1NBQ8N0W7 255 aaPredicted RBP6.77□□□□□ -1.33
LINC00648-201ENST00000553747 PHACTR1Q9C0D0 580 aa6.77□□□□□ -1.33
LINC00648-201ENST00000553747 IREB2P48200 963 aaKnown RBP6.76□□□□□ -1.33
LINC00648-201ENST00000553747 DEPDC4Q8N2C3 294 aa6.76□□□□□ -1.33
LINC00648-201ENST00000553747 WFDC12Q8WWY7 111 aa6.76□□□□□ -1.33
LINC00648-201ENST00000553747 GLMNQ92990 594 aa6.76□□□□□ -1.33
LINC00648-201ENST00000553747 NAGPAQ9UK23 515 aa6.76□□□□□ -1.33
LINC00648-201ENST00000553747 RNF112Q9ULX5 631 aa6.76□□□□□ -1.33
LINC00648-201ENST00000553747 KCNQ4P56696 695 aa6.75□□□□□ -1.33
LINC00648-201ENST00000553747 SUSD3Q96L08 255 aa6.75□□□□□ -1.33
LINC00648-201ENST00000553747 CALR3Q96L12 384 aaKnown RBP6.75□□□□□ -1.33
LINC00648-201ENST00000553747 TSPAN10Q9H1Z9 355 aaPredicted RBP6.75□□□□□ -1.33
LINC00648-201ENST00000553747 DNAJB12Q9NXW2 375 aaKnown RBP6.75□□□□□ -1.33
LINC00648-201ENST00000553747 GPC6Q9Y625 555 aaPredicted RBP6.75□□□□□ -1.33
LINC00648-201ENST00000553747 ATP9BO43861 1147 aa6.74□□□□□ -1.33
LINC00648-201ENST00000553747 NOS3P29474 1203 aa6.74□□□□□ -1.33
LINC00648-201ENST00000553747 TRIM50Q86XT4 487 aa6.74□□□□□ -1.33
LINC00648-201ENST00000553747 MEGF10Q96KG7 1140 aa6.74□□□□□ -1.33
LINC00648-201ENST00000553747 UCN2Q96RP3 112 aa6.74□□□□□ -1.33
LINC00648-201ENST00000553747 USP17L3A6NCW0 530 aa6.73□□□□□ -1.33
LINC00648-201ENST00000553747 USP17L4A6NCW7 530 aa6.73□□□□□ -1.33
LINC00648-201ENST00000553747 RGS9O75916 674 aaPredicted RBP6.73□□□□□ -1.33
LINC00648-201ENST00000553747 SSTR4P31391 388 aa6.73□□□□□ -1.33
LINC00648-201ENST00000553747 USP17L2Q6R6M4 530 aa6.73□□□□□ -1.33
LINC00648-201ENST00000553747 USP17L1Q7RTZ2 530 aa6.73□□□□□ -1.33
LINC00648-201ENST00000553747 PLEKHM2Q8IWE5 1019 aa6.73□□□□□ -1.33
LINC00648-201ENST00000553747 PCMTD2Q9NV79 361 aa6.73□□□□□ -1.33
LINC00648-201ENST00000553747 ANKIB1Q9P2G1 1089 aa6.73□□□□□ -1.33
LINC00648-201ENST00000553747 ARID1BQ8NFD5 2236 aaPredicted RBP6.73□□□□□ -1.33
LINC00648-201ENST00000553747 ATP1A2P50993 1020 aa6.72□□□□□ -1.33
LINC00648-201ENST00000553747 PSMA6P60900 246 aaKnown RBP6.72□□□□□ -1.33
LINC00648-201ENST00000553747 PLAURQ03405 335 aa6.72□□□□□ -1.33
LINC00648-201ENST00000553747 C1orf53Q5VUE5 145 aa6.72□□□□□ -1.33
LINC00648-201ENST00000553747 ILDR2Q71H61 639 aa6.72□□□□□ -1.33
LINC00648-201ENST00000553747 TPCN2Q8NHX9 752 aa6.72□□□□□ -1.33
LINC00648-201ENST00000553747 KRTAP4-9Q9BYQ8 210 aa6.72□□□□□ -1.33
LINC00648-201ENST00000553747 TFIP11Q9UBB9 837 aaKnown RBP6.72□□□□□ -1.33
LINC00648-201ENST00000553747 KIAA1024Q9UPX6 916 aa6.72□□□□□ -1.33
LINC00648-201ENST00000553747 CPB1P15086 417 aa6.71□□□□□ -1.34
LINC00648-201ENST00000553747 MKRN1Q9UHC7 482 aaKnown RBP6.71□□□□□ -1.34
LINC00648-201ENST00000553747 ZBTB7BO15156 539 aaPredicted RBP6.7□□□□□ -1.34
LINC00648-201ENST00000553747 NFKB1P19838 968 aa6.7□□□□□ -1.34
LINC00648-201ENST00000553747 MSL1Q68DK7 614 aa6.7□□□□□ -1.34
LINC00648-201ENST00000553747 BTLAQ7Z6A9 289 aa6.7□□□□□ -1.34
LINC00648-201ENST00000553747 GSX2Q9BZM3 304 aa6.7□□□□□ -1.34
LINC00648-201ENST00000553747 ZNF777Q9ULD5 760 aaPredicted RBP6.7□□□□□ -1.34
LINC00648-201ENST00000553747 RBM19Q9Y4C8 960 aaKnown RBP6.7□□□□□ -1.34
LINC00648-201ENST00000553747 COL17A1Q9UMD9 1497 aaPredicted RBP6.69□□□□□ -1.34
LINC00648-201ENST00000553747 PALM3A6NDB9 673 aaPredicted RBP6.69□□□□□ -1.34
LINC00648-201ENST00000553747 PAX4O43316 350 aa6.69□□□□□ -1.34
LINC00648-201ENST00000553747 COBLO75128 1261 aa6.69□□□□□ -1.34
LINC00648-201ENST00000553747 GRIK5Q16478 980 aa6.69□□□□□ -1.34
LINC00648-201ENST00000553747 PRR23CQ6ZRP0 262 aa6.69□□□□□ -1.34
LINC00648-201ENST00000553747 FAM35AQ86V20 835 aa6.69□□□□□ -1.34
LINC00648-201ENST00000553747 FBXO11Q86XK2 927 aa6.69□□□□□ -1.34
LINC00648-201ENST00000553747 NGLY1Q96IV0 654 aa6.69□□□□□ -1.34
LINC00648-201ENST00000553747 PNMA5Q96PV4 448 aa6.69□□□□□ -1.34
LINC00648-201ENST00000553747 CHMP3Q9Y3E7 222 aa6.69□□□□□ -1.34
LINC00648-201ENST00000553747 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.69□□□□□ -1.34
LINC00648-201ENST00000553747 GTF3C3Q9Y5Q9 886 aa6.69□□□□□ -1.34
LINC00648-201ENST00000553747 ALX3O95076 343 aa6.68□□□□□ -1.34
LINC00648-201ENST00000553747 CCDC102BQ68D86 513 aa6.68□□□□□ -1.34
LINC00648-201ENST00000553747 ALDH16A1Q8IZ83 802 aa6.68□□□□□ -1.34
LINC00648-201ENST00000553747 LARGE2Q8N3Y3 721 aa6.68□□□□□ -1.34
LINC00648-201ENST00000553747 OGFOD1Q8N543 542 aa6.68□□□□□ -1.34
LINC00648-201ENST00000553747 KRTAP4-2Q9BYR5 136 aa6.68□□□□□ -1.34
LINC00648-201ENST00000553747 PPP1R12CQ9BZL4 782 aa6.68□□□□□ -1.34
LINC00648-201ENST00000553747 MAFBQ9Y5Q3 323 aaPredicted RBP6.68□□□□□ -1.34
LINC00648-201ENST00000553747 PPP1R12BO60237 982 aaPredicted RBP6.67□□□□□ -1.34
LINC00648-201ENST00000553747 FSTP19883 344 aa6.67□□□□□ -1.34
LINC00648-201ENST00000553747 RASA1P20936 1047 aa6.67□□□□□ -1.34
LINC00648-201ENST00000553747 HIRAP54198 1017 aaPredicted RBP6.67□□□□□ -1.34
LINC00648-201ENST00000553747 CLDN10P78369 228 aa6.67□□□□□ -1.34
LINC00648-201ENST00000553747 MLLT1Q03111 559 aaPredicted RBP6.67□□□□□ -1.34
LINC00648-201ENST00000553747 KRT25Q7Z3Z0 450 aa6.67□□□□□ -1.34
LINC00648-201ENST00000553747 TSEN2Q8NCE0 465 aaKnown RBP6.67□□□□□ -1.34
LINC00648-201ENST00000553747 LPIN3Q9BQK8 851 aa6.67□□□□□ -1.34
LINC00648-201ENST00000553747 ZBTB42B2RXF5 422 aa6.66□□□□□ -1.34
LINC00648-201ENST00000553747 DEAF1O75398 565 aaPredicted RBP6.66□□□□□ -1.34
LINC00648-201ENST00000553747 CCINQ13939 588 aa6.66□□□□□ -1.34
LINC00648-201ENST00000553747 PERM1Q5SV97 790 aa6.66□□□□□ -1.34
LINC00648-201ENST00000553747 LARP1Q6PKG0 1096 aaKnown RBP6.66□□□□□ -1.34
LINC00648-201ENST00000553747 POTEAQ6S8J7 498 aa6.66□□□□□ -1.34
LINC00648-201ENST00000553747 WFDC8Q8IUA0 241 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms