RNA–Protein interactions for RNA: ENST00000553674.1

UBR7-202, Transcript of ubiquitin protein ligase E3 component n-recognin 7 (putative), humanhuman

TSL 2

Gene UBR7, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR7-202ENST00000553674 PSDA5PKW4 1024 aaPredicted RBP23.22■■□□□ 1.31
UBR7-202ENST00000553674 EXOC6Q8TAG9 804 aa23.22■■□□□ 1.31
UBR7-202ENST00000553674 H7C1W4 665 aa23.21■■□□□ 1.31
UBR7-202ENST00000553674 CASP7P55210 303 aa23.21■■□□□ 1.31
UBR7-202ENST00000553674 DDR1Q08345 913 aa23.21■■□□□ 1.31
UBR7-202ENST00000553674 MSL1Q68DK7 614 aa23.21■■□□□ 1.31
UBR7-202ENST00000553674 JARID2Q92833 1246 aaPredicted RBP23.21■■□□□ 1.31
UBR7-202ENST00000553674 MEIS3Q99687 375 aa23.21■■□□□ 1.31
UBR7-202ENST00000553674 UTYO14607 1347 aa23.21■■□□□ 1.31
UBR7-202ENST00000553674 CASZ1Q86V15 1759 aa23.21■■□□□ 1.31
UBR7-202ENST00000553674 NBPF7P0C2Y1 421 aaPredicted RBP23.2■■□□□ 1.3
UBR7-202ENST00000553674 PARP10Q53GL7 1025 aa23.2■■□□□ 1.3
UBR7-202ENST00000553674 SLC16A10Q8TF71 515 aa23.2■■□□□ 1.3
UBR7-202ENST00000553674 SETDB2Q96T68 719 aa23.2■■□□□ 1.3
UBR7-202ENST00000553674 DDX19BQ9UMR2 479 aa23.2■■□□□ 1.3
UBR7-202ENST00000553674 NTSR2O95665 410 aa23.19■■□□□ 1.3
UBR7-202ENST00000553674 SYNE4Q8N205 404 aa23.19■■□□□ 1.3
UBR7-202ENST00000553674 FAM177BA6PVY3 158 aa23.18■■□□□ 1.3
UBR7-202ENST00000553674 GRM8O00222 908 aa23.18■■□□□ 1.3
UBR7-202ENST00000553674 POLRMTO00411 1230 aaKnown RBP23.18■■□□□ 1.3
UBR7-202ENST00000553674 ZBTB40Q9NUA8 1239 aa23.18■■□□□ 1.3
UBR7-202ENST00000553674 COL24A1Q17RW2 1714 aa23.17■■□□□ 1.3
UBR7-202ENST00000553674 PCCAP05165 728 aaPredicted RBP23.17■■□□□ 1.3
UBR7-202ENST00000553674 ZBTB38Q8NAP3 1195 aaPredicted RBP23.17■■□□□ 1.3
UBR7-202ENST00000553674 FAM89AQ96GI7 184 aa23.17■■□□□ 1.3
UBR7-202ENST00000553674 UTP14AQ9BVJ6 771 aaKnown RBP23.17■■□□□ 1.3
UBR7-202ENST00000553674 AFDNP55196 1824 aaKnown RBP23.17■■□□□ 1.3
UBR7-202ENST00000553674 KAZALD1Q96I82 304 aa23.16■■□□□ 1.3
UBR7-202ENST00000553674 C9orf78Q9NZ63 289 aaPredicted RBP23.16■■□□□ 1.3
UBR7-202ENST00000553674 TRMT112Q9UI30 125 aaKnown RBP23.16■■□□□ 1.3
UBR7-202ENST00000553674 CARMIL3Q8ND23 1372 aa23.15■■□□□ 1.3
UBR7-202ENST00000553674 ZBTB7AO95365 584 aa23.15■■□□□ 1.3
UBR7-202ENST00000553674 MMP10P09238 476 aa23.15■■□□□ 1.3
UBR7-202ENST00000553674 RTL5Q5HYW3 569 aaPredicted RBP23.15■■□□□ 1.3
UBR7-202ENST00000553674 UBE3BQ7Z3V4 1068 aa23.15■■□□□ 1.3
UBR7-202ENST00000553674 PPP1R42Q7Z4L9 355 aa23.15■■□□□ 1.3
UBR7-202ENST00000553674 SERPINB2P05120 415 aa23.14■■□□□ 1.29
UBR7-202ENST00000553674 NUTM1Q86Y26 1132 aa23.14■■□□□ 1.29
UBR7-202ENST00000553674 GNAI3P08754 354 aa23.13■■□□□ 1.29
UBR7-202ENST00000553674 ERFEQ4G0M1 354 aa23.13■■□□□ 1.29
UBR7-202ENST00000553674 NBPF5PQ86XG9 351 aaPredicted RBP23.13■■□□□ 1.29
UBR7-202ENST00000553674 SUCLG2Q96I99 432 aa23.13■■□□□ 1.29
UBR7-202ENST00000553674 CDHR2Q9BYE9 1310 aa23.12■■□□□ 1.29
UBR7-202ENST00000553674 UBTFL1P0CB47 393 aaPredicted RBP23.12■■□□□ 1.29
UBR7-202ENST00000553674 EPHA10Q5JZY3 1008 aa23.12■■□□□ 1.29
UBR7-202ENST00000553674 SLC10A5Q5PT55 438 aa23.12■■□□□ 1.29
UBR7-202ENST00000553674 PRR5LQ6MZQ0 368 aa23.12■■□□□ 1.29
UBR7-202ENST00000553674 MTFR1LQ9H019 292 aa23.12■■□□□ 1.29
UBR7-202ENST00000553674 C1orf115Q9H7X2 142 aa23.12■■□□□ 1.29
UBR7-202ENST00000553674 SH3TC1Q8TE82 1336 aa23.11■■□□□ 1.29
UBR7-202ENST00000553674 NEFLP07196 543 aa23.11■■□□□ 1.29
UBR7-202ENST00000553674 TPTE2Q6XPS3 522 aa23.11■■□□□ 1.29
UBR7-202ENST00000553674 CCDC24Q8N4L8 307 aa23.11■■□□□ 1.29
UBR7-202ENST00000553674 NYXQ9GZU5 481 aa23.11■■□□□ 1.29
UBR7-202ENST00000553674 ATF5Q9Y2D1 282 aaPredicted RBP23.11■■□□□ 1.29
UBR7-202ENST00000553674 FOXO4P98177 505 aa23.1■■□□□ 1.29
UBR7-202ENST00000553674 SGIP1Q9BQI5 828 aa23.1■■□□□ 1.29
UBR7-202ENST00000553674 LRRFIP2Q9Y608 721 aaKnown RBP23.1■■□□□ 1.29
UBR7-202ENST00000553674 ABCC12Q96J65 1359 aa23.1■■□□□ 1.29
UBR7-202ENST00000553674 NRXN2Q9P2S2 1712 aa23.09■■□□□ 1.29
UBR7-202ENST00000553674 IRS4O14654 1257 aaPredicted RBP23.09■■□□□ 1.29
UBR7-202ENST00000553674 GNAI2P04899 355 aa23.09■■□□□ 1.29
UBR7-202ENST00000553674 HCLS1P14317 486 aaPredicted RBP23.09■■□□□ 1.29
UBR7-202ENST00000553674 ANKRD44Q8N8A2 993 aa23.09■■□□□ 1.29
UBR7-202ENST00000553674 PLA2G12BQ9BX93 195 aa23.09■■□□□ 1.29
UBR7-202ENST00000553674 PARP3Q9Y6F1 533 aa23.09■■□□□ 1.29
UBR7-202ENST00000553674 C3orf67Q6ZVT6 689 aa23.08■■□□□ 1.29
UBR7-202ENST00000553674 CNBD1Q8NA66 436 aa23.08■■□□□ 1.29
UBR7-202ENST00000553674 CHMP4BQ9H444 224 aaKnown RBP23.08■■□□□ 1.29
UBR7-202ENST00000553674 PCDHB15Q9Y5E8 787 aa23.08■■□□□ 1.29
UBR7-202ENST00000553674 PTGER2P43116 358 aa23.06■■□□□ 1.28
UBR7-202ENST00000553674 RABL6Q3YEC7 729 aaPredicted RBP23.06■■□□□ 1.28
UBR7-202ENST00000553674 BICC1Q9H694 974 aaKnown RBP23.06■■□□□ 1.28
UBR7-202ENST00000553674 PDE8AO60658 829 aa23.05■■□□□ 1.28
UBR7-202ENST00000553674 CSF1RP07333 972 aa23.05■■□□□ 1.28
UBR7-202ENST00000553674 GTF2E1P29083 439 aaPredicted RBP23.05■■□□□ 1.28
UBR7-202ENST00000553674 AAMPQ13685 434 aa23.05■■□□□ 1.28
UBR7-202ENST00000553674 SIRT2Q8IXJ6 389 aa23.05■■□□□ 1.28
UBR7-202ENST00000553674 CEP85Q6P2H3 762 aa23.04■■□□□ 1.28
UBR7-202ENST00000553674 DDX60Q8IY21 1712 aaKnown RBP23.04■■□□□ 1.28
UBR7-202ENST00000553674 RIC1Q4ADV7 1423 aa23.03■■□□□ 1.28
UBR7-202ENST00000553674 LMBR1LQ6UX01 489 aa23.03■■□□□ 1.28
UBR7-202ENST00000553674 TTLL11Q8NHH1 800 aa23.03■■□□□ 1.28
UBR7-202ENST00000553674 HDAC5Q9UQL6 1122 aa23.03■■□□□ 1.28
UBR7-202ENST00000553674 ATP8B2P98198 1209 aa23.02■■□□□ 1.28
UBR7-202ENST00000553674 MTX1Q13505 466 aa23.02■■□□□ 1.28
UBR7-202ENST00000553674 PNMA6EA0A0J9YXQ4 647 aa23.01■■□□□ 1.27
UBR7-202ENST00000553674 KLRG2A4D1S0 409 aaPredicted RBP23.01■■□□□ 1.27
UBR7-202ENST00000553674 CTSWP56202 376 aa23.01■■□□□ 1.27
UBR7-202ENST00000553674 ST5P78524 1137 aa23.01■■□□□ 1.27
UBR7-202ENST00000553674 SF3B3Q15393 1217 aaKnown RBP23.01■■□□□ 1.27
UBR7-202ENST00000553674 ERICH6BQ5W0A0 696 aa23.01■■□□□ 1.27
UBR7-202ENST00000553674 BRIP1Q9BX63 1249 aa23.01■■□□□ 1.27
UBR7-202ENST00000553674 TNRC6CQ9HCJ0 1690 aaKnown RBP23■■□□□ 1.27
UBR7-202ENST00000553674 LAMB2P55268 1798 aa23■■□□□ 1.27
UBR7-202ENST00000553674 RPAP2Q8IXW5 612 aaPredicted RBP23■■□□□ 1.27
UBR7-202ENST00000553674 NPHP1O15259 732 aa22.99■■□□□ 1.27
UBR7-202ENST00000553674 HSP90B1P14625 803 aaKnown RBP22.99■■□□□ 1.27
UBR7-202ENST00000553674 POLD1P28340 1107 aa22.99■■□□□ 1.27
UBR7-202ENST00000553674 NLRP3Q96P20 1036 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms