RNA–Protein interactions for RNA: ENST00000553428.2

PCNX1-204, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-204ENST00000553428 NLRP3Q96P20 1036 aa10.64□□□□□ -0.71
PCNX1-204ENST00000553428 PHAXQ9H814 394 aaKnown RBP10.64□□□□□ -0.71
PCNX1-204ENST00000553428 ABCC12Q96J65 1359 aa10.64□□□□□ -0.71
PCNX1-204ENST00000553428 ARFGEF1Q9Y6D6 1849 aa10.63□□□□□ -0.71
PCNX1-204ENST00000553428 SH3TC1Q8TE82 1336 aa10.63□□□□□ -0.71
PCNX1-204ENST00000553428 LTBP3Q9NS15 1303 aa10.63□□□□□ -0.71
PCNX1-204ENST00000553428 ZC3H4Q9UPT8 1303 aaKnown RBP10.63□□□□□ -0.71
PCNX1-204ENST00000553428 DLEC1Q9Y238 1755 aa10.63□□□□□ -0.71
PCNX1-204ENST00000553428 E9PSI1 815 aa10.63□□□□□ -0.71
PCNX1-204ENST00000553428 HOXA10P31260 410 aaPredicted RBP10.63□□□□□ -0.71
PCNX1-204ENST00000553428 EXOSC9Q06265 439 aaKnown RBP10.63□□□□□ -0.71
PCNX1-204ENST00000553428 RPGRQ92834 1020 aaKnown RBP10.63□□□□□ -0.71
PCNX1-204ENST00000553428 CRAMP1Q96RY5 1269 aa10.63□□□□□ -0.71
PCNX1-204ENST00000553428 TRMT112Q9UI30 125 aaKnown RBP10.63□□□□□ -0.71
PCNX1-204ENST00000553428 ANKRD31Q8N7Z5 1873 aa10.63□□□□□ -0.71
PCNX1-204ENST00000553428 NUP98P52948 1817 aa10.63□□□□□ -0.71
PCNX1-204ENST00000553428 C21orf2O43822 256 aa10.62□□□□□ -0.71
PCNX1-204ENST00000553428 SLC4A2P04920 1241 aa10.62□□□□□ -0.71
PCNX1-204ENST00000553428 LMNB1P20700 586 aa10.62□□□□□ -0.71
PCNX1-204ENST00000553428 GRIPAP1Q4V328 841 aa10.62□□□□□ -0.71
PCNX1-204ENST00000553428 CCDC93Q567U6 631 aa10.62□□□□□ -0.71
PCNX1-204ENST00000553428 C9orf131Q5VYM1 1079 aa10.62□□□□□ -0.71
PCNX1-204ENST00000553428 CC2D2BQ6DHV5 1058 aa10.62□□□□□ -0.71
PCNX1-204ENST00000553428 KSR2Q6VAB6 950 aa10.62□□□□□ -0.71
PCNX1-204ENST00000553428 CCDC191Q8NCU4 936 aa10.62□□□□□ -0.71
PCNX1-204ENST00000553428 C7orf43Q8WVR3 580 aa10.62□□□□□ -0.71
PCNX1-204ENST00000553428 RBM17Q96I25 401 aaKnown RBP10.62□□□□□ -0.71
PCNX1-204ENST00000553428 METTL22Q9BUU2 404 aaPredicted RBP10.62□□□□□ -0.71
PCNX1-204ENST00000553428 SPINK5Q9NQ38 1064 aaPredicted RBP10.62□□□□□ -0.71
PCNX1-204ENST00000553428 NEXNQ0ZGT2 675 aa10.61□□□□□ -0.71
PCNX1-204ENST00000553428 RTKN2Q8IZC4 609 aa10.61□□□□□ -0.71
PCNX1-204ENST00000553428 ZBTB38Q8NAP3 1195 aaPredicted RBP10.61□□□□□ -0.71
PCNX1-204ENST00000553428 RNF181Q9P0P0 153 aa10.61□□□□□ -0.71
PCNX1-204ENST00000553428 PI4KAP2A4QPH2 592 aa10.6□□□□□ -0.71
PCNX1-204ENST00000553428 ATP5J2-PTCD1G3V325 749 aa10.6□□□□□ -0.71
PCNX1-204ENST00000553428 NFKBIEO00221 500 aa10.6□□□□□ -0.71
PCNX1-204ENST00000553428 FLIIQ13045 1269 aa10.6□□□□□ -0.71
PCNX1-204ENST00000553428 PI4KAP1Q8N8J0 262 aa10.6□□□□□ -0.71
PCNX1-204ENST00000553428 ZNF428Q96B54 188 aa10.6□□□□□ -0.71
PCNX1-204ENST00000553428 MYD88Q99836 296 aa10.6□□□□□ -0.71
PCNX1-204ENST00000553428 TAOK3Q9H2K8 898 aa10.6□□□□□ -0.71
PCNX1-204ENST00000553428 GPBP1L1Q9HC44 474 aaPredicted RBP10.6□□□□□ -0.71
PCNX1-204ENST00000553428 MAP3K2Q9Y2U5 619 aa10.6□□□□□ -0.71
PCNX1-204ENST00000553428 COL11A2P13942 1736 aaPredicted RBP10.59□□□□□ -0.71
PCNX1-204ENST00000553428 PCCAP05165 728 aaPredicted RBP10.59□□□□□ -0.71
PCNX1-204ENST00000553428 HCLS1P14317 486 aaPredicted RBP10.59□□□□□ -0.71
PCNX1-204ENST00000553428 RASSF7Q02833 373 aa10.59□□□□□ -0.71
PCNX1-204ENST00000553428 SLFN5Q08AF3 891 aa10.59□□□□□ -0.71
PCNX1-204ENST00000553428 SF3B3Q15393 1217 aaKnown RBP10.59□□□□□ -0.71
PCNX1-204ENST00000553428 MIER1Q8N108 512 aa10.59□□□□□ -0.71
PCNX1-204ENST00000553428 CWC25Q9NXE8 425 aaPredicted RBP10.59□□□□□ -0.71
PCNX1-204ENST00000553428 ANKRD36CQ5JPF3 1778 aa10.58□□□□□ -0.72
PCNX1-204ENST00000553428 IRS4O14654 1257 aaPredicted RBP10.58□□□□□ -0.72
PCNX1-204ENST00000553428 TCERG1O14776 1098 aaKnown RBP10.58□□□□□ -0.72
PCNX1-204ENST00000553428 BBOX1O75936 387 aa10.58□□□□□ -0.72
PCNX1-204ENST00000553428 CT47B1P0C2W7 299 aaPredicted RBP10.58□□□□□ -0.72
PCNX1-204ENST00000553428 FKBP4Q02790 459 aaKnown RBP eCLIP10.58□□□□□ -0.72
PCNX1-204ENST00000553428 FKBP5Q13451 457 aaPredicted RBP10.58□□□□□ -0.72
PCNX1-204ENST00000553428 DDX46Q7L014 1031 aaKnown RBP10.58□□□□□ -0.72
PCNX1-204ENST00000553428 G2E3Q7L622 706 aa10.58□□□□□ -0.72
PCNX1-204ENST00000553428 TMC4Q7Z404 712 aa10.58□□□□□ -0.72
PCNX1-204ENST00000553428 FAM89AQ96GI7 184 aa10.58□□□□□ -0.72
PCNX1-204ENST00000553428 TMX4Q9H1E5 349 aaPredicted RBP10.58□□□□□ -0.72
PCNX1-204ENST00000553428 ZNF219Q9P2Y4 722 aaPredicted RBP10.58□□□□□ -0.72
PCNX1-204ENST00000553428 CDHR2Q9BYE9 1310 aa10.58□□□□□ -0.72
PCNX1-204ENST00000553428 PPEF1O14829 653 aaPredicted RBP10.57□□□□□ -0.72
PCNX1-204ENST00000553428 GRAPQ13588 217 aa10.57□□□□□ -0.72
PCNX1-204ENST00000553428 C3orf67Q6ZVT6 689 aa10.57□□□□□ -0.72
PCNX1-204ENST00000553428 TRMT2AQ8IZ69 625 aaKnown RBP10.57□□□□□ -0.72
PCNX1-204ENST00000553428 SYNE4Q8N205 404 aa10.57□□□□□ -0.72
PCNX1-204ENST00000553428 GRAPLQ8TC17 118 aaPredicted RBP10.57□□□□□ -0.72
PCNX1-204ENST00000553428 DNAAF4Q8WXU2 420 aa10.57□□□□□ -0.72
PCNX1-204ENST00000553428 PSMD1Q99460 953 aa10.57□□□□□ -0.72
PCNX1-204ENST00000553428 ARFGEF2Q9Y6D5 1785 aa10.57□□□□□ -0.72
PCNX1-204ENST00000553428 ABCC4O15439 1325 aa10.57□□□□□ -0.72
PCNX1-204ENST00000553428 KDM2BQ8NHM5 1336 aa10.57□□□□□ -0.72
PCNX1-204ENST00000553428 TNRC6CQ9HCJ0 1690 aaKnown RBP10.57□□□□□ -0.72
PCNX1-204ENST00000553428 NEURL1BA8MQ27 555 aa10.56□□□□□ -0.72
PCNX1-204ENST00000553428 PDE8AO60658 829 aa10.56□□□□□ -0.72
PCNX1-204ENST00000553428 IGKV5-2P06315 115 aa10.56□□□□□ -0.72
PCNX1-204ENST00000553428 PRELPP51888 382 aa10.56□□□□□ -0.72
PCNX1-204ENST00000553428 LINS1Q8NG48 757 aa10.56□□□□□ -0.72
PCNX1-204ENST00000553428 VPS33BQ9H267 617 aa10.56□□□□□ -0.72
PCNX1-204ENST00000553428 ATP6V0A2Q9Y487 856 aa10.56□□□□□ -0.72
PCNX1-204ENST00000553428 GLTPD2A6NH11 291 aa10.55□□□□□ -0.72
PCNX1-204ENST00000553428 DPY19L2Q6NUT2 758 aa10.55□□□□□ -0.72
PCNX1-204ENST00000553428 SP8Q8IXZ3 490 aa10.55□□□□□ -0.72
PCNX1-204ENST00000553428 SUPT20HQ8NEM7 779 aa10.55□□□□□ -0.72
PCNX1-204ENST00000553428 SLX4Q8IY92 1834 aa10.55□□□□□ -0.72
PCNX1-204ENST00000553428 SNED1Q8TER0 1413 aa10.55□□□□□ -0.72
PCNX1-204ENST00000553428 H7C1W4 665 aa10.54□□□□□ -0.72
PCNX1-204ENST00000553428 IARSP41252 1262 aaKnown RBP10.54□□□□□ -0.72
PCNX1-204ENST00000553428 GCKRQ14397 625 aa10.54□□□□□ -0.72
PCNX1-204ENST00000553428 CWF19L2Q2TBE0 894 aaKnown RBP10.54□□□□□ -0.72
PCNX1-204ENST00000553428 ALDH1L2Q3SY69 923 aa10.54□□□□□ -0.72
PCNX1-204ENST00000553428 CCDC152Q4G0S7 254 aa10.54□□□□□ -0.72
PCNX1-204ENST00000553428 RTL5Q5HYW3 569 aaPredicted RBP10.54□□□□□ -0.72
PCNX1-204ENST00000553428 ZNF526Q8TF50 670 aaPredicted RBP10.54□□□□□ -0.72
PCNX1-204ENST00000553428 PLA2G12BQ9BX93 195 aa10.54□□□□□ -0.72
PCNX1-204ENST00000553428 RTFDC1Q9BY42 306 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms