RNA–Protein interactions for RNA: ENST00000553384.5

RDH11-203, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best) BASIC

Gene RDH11, Length 1,926 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-203ENST00000553384 MASTLQ96GX5 879 aa9.23□□□□□ -0.93
RDH11-203ENST00000553384 TSPYL4Q9UJ04 414 aa9.23□□□□□ -0.93
RDH11-203ENST00000553384 ZNF330Q9Y3S2 320 aaPredicted RBP9.23□□□□□ -0.93
RDH11-203ENST00000553384 LAS1LQ9Y4W2 734 aaKnown RBP9.23□□□□□ -0.93
RDH11-203ENST00000553384 SIPA1L3O60292 1781 aaPredicted RBP9.23□□□□□ -0.93
RDH11-203ENST00000553384 RASSF10A6NK89 507 aa9.23□□□□□ -0.93
RDH11-203ENST00000553384 SNRPA1P09661 255 aaKnown RBP9.23□□□□□ -0.93
RDH11-203ENST00000553384 IL6STP40189 918 aaPredicted RBP9.23□□□□□ -0.93
RDH11-203ENST00000553384 PNMA8AQ86V59 439 aaPredicted RBP9.23□□□□□ -0.93
RDH11-203ENST00000553384 SETDB2Q96T68 719 aa9.23□□□□□ -0.93
RDH11-203ENST00000553384 SCN4AP35499 1836 aa9.22□□□□□ -0.93
RDH11-203ENST00000553384 UBR2Q8IWV8 1755 aa9.22□□□□□ -0.93
RDH11-203ENST00000553384 BCAR3O75815 825 aa9.22□□□□□ -0.93
RDH11-203ENST00000553384 LBX1P52954 281 aa9.22□□□□□ -0.93
RDH11-203ENST00000553384 ST5P78524 1137 aa9.22□□□□□ -0.93
RDH11-203ENST00000553384 DEFB115Q30KQ5 88 aa9.22□□□□□ -0.93
RDH11-203ENST00000553384 NCBP3Q53F19 620 aaKnown RBP9.22□□□□□ -0.93
RDH11-203ENST00000553384 PRPF40BQ6NWY9 871 aaKnown RBP9.22□□□□□ -0.93
RDH11-203ENST00000553384 WDR63Q8IWG1 891 aa9.22□□□□□ -0.93
RDH11-203ENST00000553384 CNBD1Q8NA66 436 aa9.22□□□□□ -0.93
RDH11-203ENST00000553384 C7orf43Q8WVR3 580 aa9.22□□□□□ -0.93
RDH11-203ENST00000553384 ANP32AP39687 249 aaKnown RBP9.21□□□□□ -0.93
RDH11-203ENST00000553384 CCDC27Q2M243 656 aa9.21□□□□□ -0.93
RDH11-203ENST00000553384 CCDC93Q567U6 631 aa9.21□□□□□ -0.93
RDH11-203ENST00000553384 ABHD8Q96I13 439 aa9.21□□□□□ -0.93
RDH11-203ENST00000553384 ZNF219Q9P2Y4 722 aaPredicted RBP9.21□□□□□ -0.93
RDH11-203ENST00000553384 HACL1Q9UJ83 578 aa9.21□□□□□ -0.93
RDH11-203ENST00000553384 PDE4AP27815 886 aa9.21□□□□□ -0.94
RDH11-203ENST00000553384 RGS19P49795 217 aa9.21□□□□□ -0.94
RDH11-203ENST00000553384 CALD1Q05682 793 aaKnown RBP9.21□□□□□ -0.94
RDH11-203ENST00000553384 CLEC4GQ6UXB4 293 aa9.21□□□□□ -0.94
RDH11-203ENST00000553384 CENPQQ7L2Z9 268 aaPredicted RBP9.21□□□□□ -0.94
RDH11-203ENST00000553384 ANKRD31Q8N7Z5 1873 aa9.21□□□□□ -0.94
RDH11-203ENST00000553384 KLRG2A4D1S0 409 aaPredicted RBP9.2□□□□□ -0.94
RDH11-203ENST00000553384 RGL2O15211 777 aa9.2□□□□□ -0.94
RDH11-203ENST00000553384 NPHP1O15259 732 aa9.2□□□□□ -0.94
RDH11-203ENST00000553384 HSPA8P11142 646 aaKnown RBP9.2□□□□□ -0.94
RDH11-203ENST00000553384 FKBP4Q02790 459 aaKnown RBP eCLIP9.2□□□□□ -0.94
RDH11-203ENST00000553384 RTKN2Q8IZC4 609 aa9.2□□□□□ -0.94
RDH11-203ENST00000553384 TRIM35Q9UPQ4 493 aa9.2□□□□□ -0.94
RDH11-203ENST00000553384 TBC1D2BQ9UPU7 963 aa9.2□□□□□ -0.94
RDH11-203ENST00000553384 PRAMEF22A3QJZ6 481 aa9.19□□□□□ -0.94
RDH11-203ENST00000553384 CAMTA2O94983 1202 aa9.19□□□□□ -0.94
RDH11-203ENST00000553384 NPR1P16066 1061 aa9.19□□□□□ -0.94
RDH11-203ENST00000553384 EPHX2P34913 555 aa9.19□□□□□ -0.94
RDH11-203ENST00000553384 CNTROBQ8N137 903 aa9.19□□□□□ -0.94
RDH11-203ENST00000553384 BACH2Q9BYV9 841 aa9.19□□□□□ -0.94
RDH11-203ENST00000553384 BABAM1Q9NWV8 329 aa9.19□□□□□ -0.94
RDH11-203ENST00000553384 USP16Q9Y5T5 823 aa9.19□□□□□ -0.94
RDH11-203ENST00000553384 WDR33Q9C0J8 1336 aaKnown RBP9.19□□□□□ -0.94
RDH11-203ENST00000553384 FZD9O00144 591 aa9.19□□□□□ -0.94
RDH11-203ENST00000553384 A1BGP04217 495 aa9.19□□□□□ -0.94
RDH11-203ENST00000553384 EIF4A1P60842 406 aaKnown RBP9.19□□□□□ -0.94
RDH11-203ENST00000553384 MLLT1Q03111 559 aaPredicted RBP9.19□□□□□ -0.94
RDH11-203ENST00000553384 PDE3AQ14432 1141 aa9.19□□□□□ -0.94
RDH11-203ENST00000553384 FAM161AQ3B820 660 aa9.19□□□□□ -0.94
RDH11-203ENST00000553384 EAPPQ56P03 285 aaPredicted RBP9.19□□□□□ -0.94
RDH11-203ENST00000553384 IPO9Q96P70 1041 aaKnown RBP9.19□□□□□ -0.94
RDH11-203ENST00000553384 CLEC11AQ9Y240 323 aa9.19□□□□□ -0.94
RDH11-203ENST00000553384 SLX4Q8IY92 1834 aa9.18□□□□□ -0.94
RDH11-203ENST00000553384 ECE1P42892 770 aa9.18□□□□□ -0.94
RDH11-203ENST00000553384 GPC2Q8N158 579 aa9.18□□□□□ -0.94
RDH11-203ENST00000553384 CCDC24Q8N4L8 307 aa9.18□□□□□ -0.94
RDH11-203ENST00000553384 CFAP44Q96MT7 982 aa9.18□□□□□ -0.94
RDH11-203ENST00000553384 NOP58Q9Y2X3 529 aaKnown RBP9.18□□□□□ -0.94
RDH11-203ENST00000553384 SCN7AQ01118 1682 aa9.18□□□□□ -0.94
RDH11-203ENST00000553384 COL11A2P13942 1736 aaPredicted RBP9.17□□□□□ -0.94
RDH11-203ENST00000553384 ALDH1B1P30837 517 aa9.17□□□□□ -0.94
RDH11-203ENST00000553384 PIP4K2AP48426 406 aaPredicted RBP9.17□□□□□ -0.94
RDH11-203ENST00000553384 GNAI1P63096 354 aa9.17□□□□□ -0.94
RDH11-203ENST00000553384 TPTE2Q6XPS3 522 aa9.17□□□□□ -0.94
RDH11-203ENST00000553384 BEGAINQ9BUH8 593 aa9.17□□□□□ -0.94
RDH11-203ENST00000553384 MYH16Q9H6N6 1097 aa9.17□□□□□ -0.94
RDH11-203ENST00000553384 ZNF652Q9Y2D9 606 aa9.17□□□□□ -0.94
RDH11-203ENST00000553384 KDM3BQ7LBC6 1761 aa9.17□□□□□ -0.94
RDH11-203ENST00000553384 ADAMTSL1Q8N6G6 1762 aa9.17□□□□□ -0.94
RDH11-203ENST00000553384 ARFGEF2Q9Y6D5 1785 aa9.17□□□□□ -0.94
RDH11-203ENST00000553384 CHL1O00533 1208 aa9.17□□□□□ -0.94
RDH11-203ENST00000553384 EIF2S2P20042 333 aaKnown RBP9.17□□□□□ -0.94
RDH11-203ENST00000553384 RARSP54136 660 aaKnown RBP9.17□□□□□ -0.94
RDH11-203ENST00000553384 NBPF5PQ86XG9 351 aaPredicted RBP9.17□□□□□ -0.94
RDH11-203ENST00000553384 DZIP3Q86Y13 1208 aaKnown RBP9.17□□□□□ -0.94
RDH11-203ENST00000553384 DDX21Q9NR30 783 aaKnown RBP eCLIP9.17□□□□□ -0.94
RDH11-203ENST00000553384 ZNF541Q9H0D2 1346 aa9.17□□□□□ -0.94
RDH11-203ENST00000553384 IARSP41252 1262 aaKnown RBP9.16□□□□□ -0.94
RDH11-203ENST00000553384 GRIPAP1Q4V328 841 aa9.16□□□□□ -0.94
RDH11-203ENST00000553384 MAP1SQ66K74 1059 aaPredicted RBP9.16□□□□□ -0.94
RDH11-203ENST00000553384 CC2D2BQ6DHV5 1058 aa9.16□□□□□ -0.94
RDH11-203ENST00000553384 SKAP1Q86WV1 359 aa9.16□□□□□ -0.94
RDH11-203ENST00000553384 PSMD1Q99460 953 aa9.16□□□□□ -0.94
RDH11-203ENST00000553384 ZNF277Q9NRM2 450 aaPredicted RBP9.16□□□□□ -0.94
RDH11-203ENST00000553384 IFT57Q9NWB7 429 aa9.16□□□□□ -0.94
RDH11-203ENST00000553384 ABT1Q9ULW3 272 aaKnown RBP9.16□□□□□ -0.94
RDH11-203ENST00000553384 CA12O43570 354 aa9.15□□□□□ -0.94
RDH11-203ENST00000553384 MYL6BP14649 208 aa9.15□□□□□ -0.94
RDH11-203ENST00000553384 MAP2K2P36507 400 aa9.15□□□□□ -0.94
RDH11-203ENST00000553384 JDP2Q8WYK2 163 aa9.15□□□□□ -0.94
RDH11-203ENST00000553384 MBIPQ9NS73 344 aa9.15□□□□□ -0.94
RDH11-203ENST00000553384 ZBTB47Q9UFB7 747 aaPredicted RBP9.15□□□□□ -0.94
RDH11-203ENST00000553384 SYNE4Q8N205 404 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms