RNA–Protein interactions for RNA: ENST00000553038.5

ACTR6-213, Transcript of ARP6 actin related protein 6 homolog, humanhuman

TSL 1 (best)

Gene ACTR6, Length 2,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR6-213ENST00000553038 EPHA10Q5JZY3 1008 aa17.31■□□□□ 0.36
ACTR6-213ENST00000553038 FBXO41Q8TF61 875 aa17.31■□□□□ 0.36
ACTR6-213ENST00000553038 TBC1D32Q96NH3 1257 aa17.31■□□□□ 0.36
ACTR6-213ENST00000553038 PA2G4Q9UQ80 394 aaKnown RBP17.31■□□□□ 0.36
ACTR6-213ENST00000553038 ERVV-1B6SEH8 477 aa17.31■□□□□ 0.36
ACTR6-213ENST00000553038 DDRGK1Q96HY6 314 aa17.31■□□□□ 0.36
ACTR6-213ENST00000553038 IL1RAPL2Q9NP60 686 aa17.31■□□□□ 0.36
ACTR6-213ENST00000553038 COL15A1P39059 1388 aa17.31■□□□□ 0.36
ACTR6-213ENST00000553038 TRIM37O94972 964 aa17.3■□□□□ 0.36
ACTR6-213ENST00000553038 PDE1AP54750 535 aa17.3■□□□□ 0.36
ACTR6-213ENST00000553038 G3BP1Q13283 466 aaKnown RBP eCLIP17.3■□□□□ 0.36
ACTR6-213ENST00000553038 TSHZ3Q63HK5 1081 aa17.3■□□□□ 0.36
ACTR6-213ENST00000553038 TBC1D9Q6ZT07 1266 aa17.3■□□□□ 0.36
ACTR6-213ENST00000553038 KIF1BPQ96EK5 621 aa17.3■□□□□ 0.36
ACTR6-213ENST00000553038 SIL1Q9H173 461 aa17.3■□□□□ 0.36
ACTR6-213ENST00000553038 SALL3Q9BXA9 1300 aa17.3■□□□□ 0.36
ACTR6-213ENST00000553038 NBR1Q14596 966 aa17.3■□□□□ 0.36
ACTR6-213ENST00000553038 LMBR1LQ6UX01 489 aa17.3■□□□□ 0.36
ACTR6-213ENST00000553038 FAM89AQ96GI7 184 aa17.3■□□□□ 0.36
ACTR6-213ENST00000553038 GNPATO15228 680 aa17.29■□□□□ 0.36
ACTR6-213ENST00000553038 RHPN1Q8TCX5 695 aa17.29■□□□□ 0.36
ACTR6-213ENST00000553038 UPF2Q9HAU5 1272 aaKnown RBP17.29■□□□□ 0.36
ACTR6-213ENST00000553038 FAM177BA6PVY3 158 aa17.28■□□□□ 0.36
ACTR6-213ENST00000553038 CASP7P55210 303 aa17.28■□□□□ 0.36
ACTR6-213ENST00000553038 NLRP10Q86W26 655 aa17.28■□□□□ 0.36
ACTR6-213ENST00000553038 ERC1Q8IUD2 1116 aa17.28■□□□□ 0.36
ACTR6-213ENST00000553038 TRMT112Q9UI30 125 aaKnown RBP17.28■□□□□ 0.36
ACTR6-213ENST00000553038 ZNF652Q9Y2D9 606 aa17.28■□□□□ 0.36
ACTR6-213ENST00000553038 BRWD3Q6RI45 1802 aa17.28■□□□□ 0.36
ACTR6-213ENST00000553038 CICQ96RK0 1608 aaPredicted RBP17.28■□□□□ 0.36
ACTR6-213ENST00000553038 CNTNAP4Q9C0A0 1308 aa17.28■□□□□ 0.36
ACTR6-213ENST00000553038 SBF2Q86WG5 1849 aa17.28■□□□□ 0.36
ACTR6-213ENST00000553038 SDSP20132 328 aa17.28■□□□□ 0.36
ACTR6-213ENST00000553038 TRIM28Q13263 835 aaKnown RBP17.28■□□□□ 0.36
ACTR6-213ENST00000553038 KLHDC4Q8TBB5 520 aa17.28■□□□□ 0.36
ACTR6-213ENST00000553038 OSBPL3Q9H4L5 887 aa17.28■□□□□ 0.36
ACTR6-213ENST00000553038 COL5A3P25940 1745 aaPredicted RBP17.27■□□□□ 0.36
ACTR6-213ENST00000553038 PCCAP05165 728 aaPredicted RBP17.27■□□□□ 0.36
ACTR6-213ENST00000553038 ZBTB38Q8NAP3 1195 aaPredicted RBP17.27■□□□□ 0.36
ACTR6-213ENST00000553038 C22orf23Q9BZE7 217 aa17.27■□□□□ 0.36
ACTR6-213ENST00000553038 AK7Q96M32 723 aa17.26■□□□□ 0.35
ACTR6-213ENST00000553038 ZNF831Q5JPB2 1677 aa17.26■□□□□ 0.35
ACTR6-213ENST00000553038 CDC45O75419 566 aa17.26■□□□□ 0.35
ACTR6-213ENST00000553038 CAMTA2O94983 1202 aa17.26■□□□□ 0.35
ACTR6-213ENST00000553038 NUTM1Q86Y26 1132 aa17.26■□□□□ 0.35
ACTR6-213ENST00000553038 RTCBQ9Y3I0 505 aaKnown RBP17.26■□□□□ 0.35
ACTR6-213ENST00000553038 RREB1Q92766 1687 aa17.25■□□□□ 0.35
ACTR6-213ENST00000553038 MX1P20591 662 aa17.25■□□□□ 0.35
ACTR6-213ENST00000553038 FOXO4P98177 505 aa17.25■□□□□ 0.35
ACTR6-213ENST00000553038 RABL6Q3YEC7 729 aaPredicted RBP17.25■□□□□ 0.35
ACTR6-213ENST00000553038 SMIM5Q71RC9 77 aa17.25■□□□□ 0.35
ACTR6-213ENST00000553038 CLASRPQ8N2M8 674 aaKnown RBP17.25■□□□□ 0.35
ACTR6-213ENST00000553038 CCDC85AQ96PX6 553 aaPredicted RBP17.25■□□□□ 0.35
ACTR6-213ENST00000553038 NIP7Q9Y221 180 aaKnown RBP eCLIP17.25■□□□□ 0.35
ACTR6-213ENST00000553038 MYH14Q7Z406 1995 aaKnown RBP17.25■□□□□ 0.35
ACTR6-213ENST00000553038 PHF14O94880 888 aa17.25■□□□□ 0.35
ACTR6-213ENST00000553038 RC3H1Q5TC82 1133 aaKnown RBP17.25■□□□□ 0.35
ACTR6-213ENST00000553038 TAF7LQ5H9L4 462 aa17.24■□□□□ 0.35
ACTR6-213ENST00000553038 ANKRD36CQ5JPF3 1778 aa17.24■□□□□ 0.35
ACTR6-213ENST00000553038 NUP98P52948 1817 aa17.23■□□□□ 0.35
ACTR6-213ENST00000553038 ZPR1O75312 459 aa17.23■□□□□ 0.35
ACTR6-213ENST00000553038 RPS6KA4O75676 772 aa17.23■□□□□ 0.35
ACTR6-213ENST00000553038 IFIT2P09913 472 aaKnown RBP17.23■□□□□ 0.35
ACTR6-213ENST00000553038 ZNF34Q8IZ26 560 aa17.23■□□□□ 0.35
ACTR6-213ENST00000553038 STAP2Q9UGK3 403 aa17.23■□□□□ 0.35
ACTR6-213ENST00000553038 UBN2Q6ZU65 1347 aa17.23■□□□□ 0.35
ACTR6-213ENST00000553038 IRS4O14654 1257 aaPredicted RBP17.23■□□□□ 0.35
ACTR6-213ENST00000553038 CCDC57Q2TAC2 916 aa17.23■□□□□ 0.35
ACTR6-213ENST00000553038 SYNE4Q8N205 404 aa17.23■□□□□ 0.35
ACTR6-213ENST00000553038 UTP14AQ9BVJ6 771 aaKnown RBP17.23■□□□□ 0.35
ACTR6-213ENST00000553038 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.23■□□□□ 0.35
ACTR6-213ENST00000553038 EIF5BO60841 1220 aaKnown RBP17.22■□□□□ 0.35
ACTR6-213ENST00000553038 PARP10Q53GL7 1025 aa17.22■□□□□ 0.35
ACTR6-213ENST00000553038 BICDL1Q6ZP65 573 aa17.22■□□□□ 0.35
ACTR6-213ENST00000553038 LY75O60449 1722 aa17.21■□□□□ 0.35
ACTR6-213ENST00000553038 PTPN12Q05209 780 aaKnown RBP17.21■□□□□ 0.35
ACTR6-213ENST00000553038 SUSD4Q5VX71 490 aa17.21■□□□□ 0.35
ACTR6-213ENST00000553038 AACSQ86V21 672 aa17.21■□□□□ 0.35
ACTR6-213ENST00000553038 GPATCH3Q96I76 525 aa17.21■□□□□ 0.35
ACTR6-213ENST00000553038 COPRSQ9NQ92 184 aa17.21■□□□□ 0.35
ACTR6-213ENST00000553038 USPL1Q5W0Q7 1092 aa17.21■□□□□ 0.35
ACTR6-213ENST00000553038 CDHR2Q9BYE9 1310 aa17.21■□□□□ 0.35
ACTR6-213ENST00000553038 TRIM6-TRIM34B2RNG4 842 aa17.2■□□□□ 0.34
ACTR6-213ENST00000553038 SASH1O94885 1247 aa17.2■□□□□ 0.34
ACTR6-213ENST00000553038 RFC4P35249 363 aa17.2■□□□□ 0.34
ACTR6-213ENST00000553038 RFX5P48382 616 aaPredicted RBP17.2■□□□□ 0.34
ACTR6-213ENST00000553038 SLC27A3Q5K4L6 730 aa17.2■□□□□ 0.34
ACTR6-213ENST00000553038 SRP68Q9UHB9 627 aaKnown RBP17.2■□□□□ 0.34
ACTR6-213ENST00000553038 SH3TC1Q8TE82 1336 aa17.2■□□□□ 0.34
ACTR6-213ENST00000553038 APBA3O96018 575 aa17.2■□□□□ 0.34
ACTR6-213ENST00000553038 IFIT5Q13325 482 aaKnown RBP17.2■□□□□ 0.34
ACTR6-213ENST00000553038 TRAPPC3LQ5T215 181 aa17.2■□□□□ 0.34
ACTR6-213ENST00000553038 CLEC4GQ6UXB4 293 aa17.2■□□□□ 0.34
ACTR6-213ENST00000553038 ZNF594Q96JF6 807 aaPredicted RBP17.2■□□□□ 0.34
ACTR6-213ENST00000553038 LRRC4BQ9NT99 713 aa17.2■□□□□ 0.34
ACTR6-213ENST00000553038 PDE8AO60658 829 aa17.19■□□□□ 0.34
ACTR6-213ENST00000553038 GTF2E1P29083 439 aaPredicted RBP17.19■□□□□ 0.34
ACTR6-213ENST00000553038 RBM25P49756 843 aaKnown RBP17.19■□□□□ 0.34
ACTR6-213ENST00000553038 CTSWP56202 376 aa17.19■□□□□ 0.34
ACTR6-213ENST00000553038 POTEAQ6S8J7 498 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms