RNA–Protein interactions for RNA: ENST00000552818.1

PFKM-229, Transcript of phosphofructokinase, muscle, human

TSL 2

Gene PFKM, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-229	ENST00000552818	SEPT12	Q8IYM1	358 aa		12.04	□□□□□ -0.48
PFKM-229	ENST00000552818	SYTL4	Q96C24	671 aa	Predicted RBP	12.04	□□□□□ -0.48
PFKM-229	ENST00000552818	SRCIN1	Q9C0H9	1055 aa		12.04	□□□□□ -0.48
PFKM-229	ENST00000552818	RWDD1	Q9H446	243 aa	Predicted RBP	12.04	□□□□□ -0.48
PFKM-229	ENST00000552818	QTRT2	Q9H974	415 aa	Known RBP	12.04	□□□□□ -0.48
PFKM-229	ENST00000552818	PDZRN3	Q9UPQ7	1066 aa		12.04	□□□□□ -0.48
PFKM-229	ENST00000552818	UTY	O14607	1347 aa		12.04	□□□□□ -0.48
PFKM-229	ENST00000552818	DDX60	Q8IY21	1712 aa	Known RBP	12.03	□□□□□ -0.48
PFKM-229	ENST00000552818	NBPF7	P0C2Y1	421 aa	Predicted RBP	12.03	□□□□□ -0.48
PFKM-229	ENST00000552818	PDE4A	P27815	886 aa		12.03	□□□□□ -0.48
PFKM-229	ENST00000552818	PSEN1	P49768	467 aa		12.03	□□□□□ -0.48
PFKM-229	ENST00000552818	CACNB1	Q02641	598 aa	Predicted RBP	12.03	□□□□□ -0.48
PFKM-229	ENST00000552818	KAZALD1	Q96I82	304 aa		12.03	□□□□□ -0.48
PFKM-229	ENST00000552818	METTL22	Q9BUU2	404 aa	Predicted RBP	12.03	□□□□□ -0.48
PFKM-229	ENST00000552818	ALDH1L1	O75891	902 aa		12.02	□□□□□ -0.49
PFKM-229	ENST00000552818	LINS1	Q8NG48	757 aa		12.02	□□□□□ -0.49
PFKM-229	ENST00000552818	CHMP4B	Q9H444	224 aa	Known RBP	12.02	□□□□□ -0.49
PFKM-229	ENST00000552818	ZBTB1	Q9Y2K1	713 aa		12.02	□□□□□ -0.49
PFKM-229	ENST00000552818	COL24A1	Q17RW2	1714 aa		12.02	□□□□□ -0.49
PFKM-229	ENST00000552818	LOC102724428	A0A0B4J2F2	783 aa		12.01	□□□□□ -0.49
PFKM-229	ENST00000552818	PNMA6E	A0A0J9YXQ4	647 aa		12.01	□□□□□ -0.49
PFKM-229	ENST00000552818	NEURL1B	A8MQ27	555 aa		12.01	□□□□□ -0.49
PFKM-229	ENST00000552818	SIK1	P57059	783 aa		12.01	□□□□□ -0.49
PFKM-229	ENST00000552818	INTS5	Q6P9B9	1019 aa	Known RBP	12.01	□□□□□ -0.49
PFKM-229	ENST00000552818	ANKRD13D	Q6ZTN6	518 aa		12.01	□□□□□ -0.49
PFKM-229	ENST00000552818	PLBD2	Q8NHP8	589 aa		12.01	□□□□□ -0.49
PFKM-229	ENST00000552818	RGS17	Q9UGC6	210 aa	Predicted RBP	12.01	□□□□□ -0.49
PFKM-229	ENST00000552818	LRRFIP2	Q9Y608	721 aa	Known RBP	12.01	□□□□□ -0.49
PFKM-229	ENST00000552818	RGPD3	A6NKT7	1758 aa	Predicted RBP	12	□□□□□ -0.49
PFKM-229	ENST00000552818	RGPD4	Q7Z3J3	1758 aa		12	□□□□□ -0.49
PFKM-229	ENST00000552818	DDX58	O95786	925 aa	Known RBP	12	□□□□□ -0.49
PFKM-229	ENST00000552818	GNAI2	P04899	355 aa		12	□□□□□ -0.49
PFKM-229	ENST00000552818	GNAI3	P08754	354 aa		12	□□□□□ -0.49
PFKM-229	ENST00000552818	CASP7	P55210	303 aa		12	□□□□□ -0.49
PFKM-229	ENST00000552818	RPAP2	Q8IXW5	612 aa	Predicted RBP	12	□□□□□ -0.49
PFKM-229	ENST00000552818	MYD88	Q99836	296 aa		12	□□□□□ -0.49
PFKM-229	ENST00000552818	TEX13A	Q9BXU3	409 aa	Predicted RBP	12	□□□□□ -0.49
PFKM-229	ENST00000552818	DCTPP1	Q9H773	170 aa		12	□□□□□ -0.49
PFKM-229	ENST00000552818		A0A0G2JS52	829 aa		11.99	□□□□□ -0.49
PFKM-229	ENST00000552818	ZMYND10	O75800	440 aa		11.99	□□□□□ -0.49
PFKM-229	ENST00000552818	MYT1	Q01538	1121 aa		11.99	□□□□□ -0.49
PFKM-229	ENST00000552818	NUCB1	Q02818	461 aa		11.99	□□□□□ -0.49
PFKM-229	ENST00000552818	RIC3	Q7Z5B4	369 aa		11.99	□□□□□ -0.49
PFKM-229	ENST00000552818	LINC00116	Q8NCU8	138 aa		11.99	□□□□□ -0.49
PFKM-229	ENST00000552818	COL15A1	P39059	1388 aa		11.99	□□□□□ -0.49
PFKM-229	ENST00000552818	AK9	Q5TCS8	1911 aa		11.98	□□□□□ -0.49
PFKM-229	ENST00000552818	GRM8	O00222	908 aa		11.98	□□□□□ -0.49
PFKM-229	ENST00000552818	PITPNM1	O00562	1244 aa		11.98	□□□□□ -0.49
PFKM-229	ENST00000552818	UBTFL1	P0CB47	393 aa	Predicted RBP	11.98	□□□□□ -0.49
PFKM-229	ENST00000552818	CRKL	P46109	303 aa	Known RBP	11.98	□□□□□ -0.49
PFKM-229	ENST00000552818	EIF5	P55010	431 aa	Known RBP	11.98	□□□□□ -0.49
PFKM-229	ENST00000552818	ATP8B2	P98198	1209 aa		11.98	□□□□□ -0.49
PFKM-229	ENST00000552818	MTX1	Q13505	466 aa		11.98	□□□□□ -0.49
PFKM-229	ENST00000552818	GCKR	Q14397	625 aa		11.98	□□□□□ -0.49
PFKM-229	ENST00000552818	SUCLG2	Q96I99	432 aa		11.98	□□□□□ -0.49
PFKM-229	ENST00000552818	ZBTB3	Q9H5J0	574 aa		11.98	□□□□□ -0.49
PFKM-229	ENST00000552818	STARD3NL	O95772	234 aa		11.97	□□□□□ -0.49
PFKM-229	ENST00000552818	ATP6V1A	P38606	617 aa		11.97	□□□□□ -0.49
PFKM-229	ENST00000552818	RGS3	P49796	1198 aa		11.97	□□□□□ -0.49
PFKM-229	ENST00000552818	KCNQ4	P56696	695 aa		11.97	□□□□□ -0.49
PFKM-229	ENST00000552818	EPHA10	Q5JZY3	1008 aa		11.97	□□□□□ -0.49
PFKM-229	ENST00000552818	FBXO22	Q8NEZ5	403 aa		11.97	□□□□□ -0.49
PFKM-229	ENST00000552818	SSH3	Q8TE77	659 aa		11.97	□□□□□ -0.49
PFKM-229	ENST00000552818	SMARCC1	Q92922	1105 aa	Predicted RBP	11.97	□□□□□ -0.49
PFKM-229	ENST00000552818	ISCA1	Q9BUE6	129 aa		11.97	□□□□□ -0.49
PFKM-229	ENST00000552818	CCDC87	Q9NVE4	849 aa		11.97	□□□□□ -0.49
PFKM-229	ENST00000552818	SPEF2	Q9C093	1822 aa		11.97	□□□□□ -0.49
PFKM-229	ENST00000552818		A0A1B0GUL6	1792 aa		11.97	□□□□□ -0.49
PFKM-229	ENST00000552818	MAP3K15	Q6ZN16	1313 aa		11.96	□□□□□ -0.49
PFKM-229	ENST00000552818	ATP5J2-PTCD1	G3V325	749 aa		11.96	□□□□□ -0.49
PFKM-229	ENST00000552818	IL6ST	P40189	918 aa	Predicted RBP	11.96	□□□□□ -0.49
PFKM-229	ENST00000552818	HLF	Q16534	295 aa		11.96	□□□□□ -0.49
PFKM-229	ENST00000552818	ZNF579	Q8NAF0	562 aa	Known RBP	11.96	□□□□□ -0.49
PFKM-229	ENST00000552818	GCC1	Q96CN9	775 aa		11.96	□□□□□ -0.49
PFKM-229	ENST00000552818	CNTNAP4	Q9C0A0	1308 aa		11.95	□□□□□ -0.5
PFKM-229	ENST00000552818	COL4A1	P02462	1669 aa		11.95	□□□□□ -0.5
PFKM-229	ENST00000552818	RBM6	P78332	1123 aa	Known RBP	11.95	□□□□□ -0.5
PFKM-229	ENST00000552818	ZNF772	Q68DY9	489 aa	Predicted RBP	11.95	□□□□□ -0.5
PFKM-229	ENST00000552818	PPP1R42	Q7Z4L9	355 aa		11.95	□□□□□ -0.5
PFKM-229	ENST00000552818	CHD1L	Q86WJ1	897 aa		11.95	□□□□□ -0.5
PFKM-229	ENST00000552818	AMIGO3	Q86WK7	504 aa		11.95	□□□□□ -0.5
PFKM-229	ENST00000552818	PELP1	Q8IZL8	1130 aa	Known RBP	11.95	□□□□□ -0.5
PFKM-229	ENST00000552818	JARID2	Q92833	1246 aa	Predicted RBP	11.95	□□□□□ -0.5
PFKM-229	ENST00000552818	LRP5	O75197	1615 aa		11.95	□□□□□ -0.5
PFKM-229	ENST00000552818	SALL3	Q9BXA9	1300 aa		11.94	□□□□□ -0.5
PFKM-229	ENST00000552818	TAF1	P21675	1872 aa		11.94	□□□□□ -0.5
PFKM-229	ENST00000552818		H7C1W4	665 aa		11.94	□□□□□ -0.5
PFKM-229	ENST00000552818	C8orf34	Q49A92	452 aa		11.94	□□□□□ -0.5
PFKM-229	ENST00000552818	POTEA	Q6S8J7	498 aa		11.94	□□□□□ -0.5
PFKM-229	ENST00000552818	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.94	□□□□□ -0.5
PFKM-229	ENST00000552818	KRT27	Q7Z3Y8	459 aa		11.94	□□□□□ -0.5
PFKM-229	ENST00000552818	LNPK	Q9C0E8	428 aa		11.94	□□□□□ -0.5
PFKM-229	ENST00000552818	BICC1	Q9H694	974 aa	Known RBP	11.94	□□□□□ -0.5
PFKM-229	ENST00000552818	UBN2	Q6ZU65	1347 aa		11.93	□□□□□ -0.5
PFKM-229	ENST00000552818	SMARCA5	O60264	1052 aa	Predicted RBP	11.93	□□□□□ -0.5
PFKM-229	ENST00000552818	CAMTA2	O94983	1202 aa		11.93	□□□□□ -0.5
PFKM-229	ENST00000552818	NEXN	Q0ZGT2	675 aa		11.93	□□□□□ -0.5
PFKM-229	ENST00000552818	TRIM28	Q13263	835 aa	Known RBP	11.93	□□□□□ -0.5
PFKM-229	ENST00000552818	TCIRG1	Q13488	830 aa		11.93	□□□□□ -0.5
PFKM-229	ENST00000552818	RABL6	Q3YEC7	729 aa	Predicted RBP	11.93	□□□□□ -0.5

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