RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 DLG5Q8TDM6 1919 aa11.45□□□□□ -0.58
CDK4-213ENST00000552713 LAMB4A4D0S4 1761 aa11.44□□□□□ -0.58
CDK4-213ENST00000552713 KIF7Q2M1P5 1343 aa11.44□□□□□ -0.58
CDK4-213ENST00000552713 TRAF5O00463 557 aa11.44□□□□□ -0.58
CDK4-213ENST00000552713 EPS15P42566 896 aa11.44□□□□□ -0.58
CDK4-213ENST00000552713 MAP2K1Q02750 393 aaPredicted RBP11.44□□□□□ -0.58
CDK4-213ENST00000552713 TRIM26Q12899 539 aaPredicted RBP11.44□□□□□ -0.58
CDK4-213ENST00000552713 CNGB1Q14028 1251 aaPredicted RBP11.44□□□□□ -0.58
CDK4-213ENST00000552713 CYP4F22Q6NT55 531 aa11.44□□□□□ -0.58
CDK4-213ENST00000552713 RTKN2Q8IZC4 609 aa11.44□□□□□ -0.58
CDK4-213ENST00000552713 GPC2Q8N158 579 aa11.44□□□□□ -0.58
CDK4-213ENST00000552713 ABCC12Q96J65 1359 aa11.43□□□□□ -0.58
CDK4-213ENST00000552713 CCDC85CA6NKD9 419 aa11.43□□□□□ -0.58
CDK4-213ENST00000552713 SCNN1DP51172 638 aa11.43□□□□□ -0.58
CDK4-213ENST00000552713 GRM1Q13255 1194 aa11.43□□□□□ -0.58
CDK4-213ENST00000552713 CST9Q5W186 159 aa11.43□□□□□ -0.58
CDK4-213ENST00000552713 TPTE2Q6XPS3 522 aa11.43□□□□□ -0.58
CDK4-213ENST00000552713 CAPNS2Q96L46 248 aa11.43□□□□□ -0.58
CDK4-213ENST00000552713 PCGF6Q9BYE7 350 aa11.43□□□□□ -0.58
CDK4-213ENST00000552713 GJA3Q9Y6H8 435 aa11.43□□□□□ -0.58
CDK4-213ENST00000552713 TAF1P21675 1872 aa11.42□□□□□ -0.58
CDK4-213ENST00000552713 PAXIP1Q6ZW49 1069 aaPredicted RBP11.42□□□□□ -0.58
CDK4-213ENST00000552713 NUTM1Q86Y26 1132 aa11.42□□□□□ -0.58
CDK4-213ENST00000552713 PSMD1Q99460 953 aa11.42□□□□□ -0.58
CDK4-213ENST00000552713 ZNF652Q9Y2D9 606 aa11.42□□□□□ -0.58
CDK4-213ENST00000552713 PDE4DIPQ5VU43 2346 aa11.41□□□□□ -0.58
CDK4-213ENST00000552713 AOC2O75106 756 aa11.41□□□□□ -0.58
CDK4-213ENST00000552713 SNRPA1P09661 255 aaKnown RBP11.41□□□□□ -0.58
CDK4-213ENST00000552713 PRKAR2BP31323 418 aa11.41□□□□□ -0.58
CDK4-213ENST00000552713 RGS19P49795 217 aa11.41□□□□□ -0.58
CDK4-213ENST00000552713 MLLT1Q03111 559 aaPredicted RBP11.41□□□□□ -0.58
CDK4-213ENST00000552713 CRY2Q49AN0 593 aa11.41□□□□□ -0.58
CDK4-213ENST00000552713 MCM10Q7L590 875 aa11.41□□□□□ -0.58
CDK4-213ENST00000552713 GPR101Q96P66 508 aaPredicted RBP11.41□□□□□ -0.58
CDK4-213ENST00000552713 LAMB2P55268 1798 aa11.41□□□□□ -0.58
CDK4-213ENST00000552713 ALDH1B1P30837 517 aa11.4□□□□□ -0.58
CDK4-213ENST00000552713 DCTN1Q14203 1278 aa11.4□□□□□ -0.58
CDK4-213ENST00000552713 PIP4P2Q8N4L2 257 aa11.4□□□□□ -0.58
CDK4-213ENST00000552713 JDP2Q8WYK2 163 aa11.4□□□□□ -0.58
CDK4-213ENST00000552713 RSPH6AQ9H0K4 717 aa11.4□□□□□ -0.58
CDK4-213ENST00000552713 CLSPNQ9HAW4 1339 aa11.39□□□□□ -0.59
CDK4-213ENST00000552713 KDM3BQ7LBC6 1761 aa11.39□□□□□ -0.59
CDK4-213ENST00000552713 TCERG1O14776 1098 aaKnown RBP11.39□□□□□ -0.59
CDK4-213ENST00000552713 EIF6P56537 245 aaKnown RBP11.39□□□□□ -0.59
CDK4-213ENST00000552713 C3orf67Q6ZVT6 689 aa11.39□□□□□ -0.59
CDK4-213ENST00000552713 TLL2Q9Y6L7 1015 aa11.39□□□□□ -0.59
CDK4-213ENST00000552713 GTF2E1P29083 439 aaPredicted RBP11.38□□□□□ -0.59
CDK4-213ENST00000552713 LMOD1P29536 600 aaPredicted RBP11.38□□□□□ -0.59
CDK4-213ENST00000552713 ECE1P42892 770 aa11.38□□□□□ -0.59
CDK4-213ENST00000552713 LARGE2Q8N3Y3 721 aa11.38□□□□□ -0.59
CDK4-213ENST00000552713 NGEFQ8N5V2 710 aa11.38□□□□□ -0.59
CDK4-213ENST00000552713 MCOLN1Q9GZU1 580 aa11.38□□□□□ -0.59
CDK4-213ENST00000552713 MIS18AQ9NYP9 233 aa11.38□□□□□ -0.59
CDK4-213ENST00000552713 UBN2Q6ZU65 1347 aa11.37□□□□□ -0.59
CDK4-213ENST00000552713 RGL2O15211 777 aa11.37□□□□□ -0.59
CDK4-213ENST00000552713 TTLL7Q6ZT98 887 aa11.37□□□□□ -0.59
CDK4-213ENST00000552713 USP50Q70EL3 339 aaPredicted RBP11.37□□□□□ -0.59
CDK4-213ENST00000552713 BEGAINQ9BUH8 593 aa11.37□□□□□ -0.59
CDK4-213ENST00000552713 RIC1Q4ADV7 1423 aa11.36□□□□□ -0.59
CDK4-213ENST00000552713 GPTP24298 496 aa11.36□□□□□ -0.59
CDK4-213ENST00000552713 HOXA10P31260 410 aaPredicted RBP11.36□□□□□ -0.59
CDK4-213ENST00000552713 SAPCD2Q86UD0 394 aa11.36□□□□□ -0.59
CDK4-213ENST00000552713 ZIC5Q96T25 663 aa11.36□□□□□ -0.59
CDK4-213ENST00000552713 GLIS2Q9BZE0 524 aaPredicted RBP11.36□□□□□ -0.59
CDK4-213ENST00000552713 GPRC5DQ9NZD1 345 aa11.36□□□□□ -0.59
CDK4-213ENST00000552713 AKAP11Q9UKA4 1901 aa11.36□□□□□ -0.59
CDK4-213ENST00000552713 CELF2O95319 508 aaKnown RBP11.35□□□□□ -0.59
CDK4-213ENST00000552713 MAP2K2P36507 400 aa11.35□□□□□ -0.59
CDK4-213ENST00000552713 AOC3Q16853 763 aa11.35□□□□□ -0.59
CDK4-213ENST00000552713 SUSD4Q5VX71 490 aa11.35□□□□□ -0.59
CDK4-213ENST00000552713 CC2D2BQ6DHV5 1058 aa11.35□□□□□ -0.59
CDK4-213ENST00000552713 DLK2Q6UY11 383 aa11.35□□□□□ -0.59
CDK4-213ENST00000552713 RPGRQ92834 1020 aaKnown RBP11.35□□□□□ -0.59
CDK4-213ENST00000552713 CFAP44Q96MT7 982 aa11.35□□□□□ -0.59
CDK4-213ENST00000552713 NPC1L1Q9UHC9 1359 aa11.35□□□□□ -0.59
CDK4-213ENST00000552713 ANKRD36CQ5JPF3 1778 aa11.35□□□□□ -0.59
CDK4-213ENST00000552713 MAP3K15Q6ZN16 1313 aa11.35□□□□□ -0.59
CDK4-213ENST00000552713 SHTN1A0MZ66 631 aa11.34□□□□□ -0.59
CDK4-213ENST00000552713 PPEF1O14829 653 aaPredicted RBP11.34□□□□□ -0.59
CDK4-213ENST00000552713 PPIP5K2O43314 1243 aa11.34□□□□□ -0.59
CDK4-213ENST00000552713 HIRAP54198 1017 aaPredicted RBP11.34□□□□□ -0.59
CDK4-213ENST00000552713 CXCL9Q07325 125 aa11.34□□□□□ -0.59
CDK4-213ENST00000552713 NIM1KQ8IY84 436 aa11.34□□□□□ -0.59
CDK4-213ENST00000552713 RTF1Q92541 710 aaKnown RBP11.34□□□□□ -0.59
CDK4-213ENST00000552713 CRAMP1Q96RY5 1269 aa11.34□□□□□ -0.59
CDK4-213ENST00000552713 NYXQ9GZU5 481 aa11.34□□□□□ -0.59
CDK4-213ENST00000552713 ZBTB3Q9H5J0 574 aa11.34□□□□□ -0.59
CDK4-213ENST00000552713 FOXD4L1Q9NU39 408 aa11.34□□□□□ -0.59
CDK4-213ENST00000552713 ERVV-1B6SEH8 477 aa11.33□□□□□ -0.6
CDK4-213ENST00000552713 NTSR2O95665 410 aa11.33□□□□□ -0.6
CDK4-213ENST00000552713 GMPSP49915 693 aaPredicted RBP11.33□□□□□ -0.6
CDK4-213ENST00000552713 DGKZQ13574 1117 aa11.33□□□□□ -0.6
CDK4-213ENST00000552713 TAF7Q15545 349 aaPredicted RBP11.33□□□□□ -0.6
CDK4-213ENST00000552713 CIAPIN1Q6FI81 312 aa11.33□□□□□ -0.6
CDK4-213ENST00000552713 REM2Q8IYK8 340 aaPredicted RBP11.33□□□□□ -0.6
CDK4-213ENST00000552713 RBM17Q96I25 401 aaKnown RBP11.33□□□□□ -0.6
CDK4-213ENST00000552713 ZNF408Q9H9D4 720 aa11.33□□□□□ -0.6
CDK4-213ENST00000552713 ADARB2Q9NS39 739 aaKnown RBP11.33□□□□□ -0.6
CDK4-213ENST00000552713 RRP7AQ9Y3A4 280 aaKnown RBP11.33□□□□□ -0.6
CDK4-213ENST00000552713 IBTKQ9P2D0 1353 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms