RNA–Protein interactions for RNA: ENST00000552386.1

RBM19-206, Transcript of RNA binding motif protein 19, human

TSL 2

Gene RBM19, Length 692 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM19-206	ENST00000552386	DDRGK1	Q96HY6	314 aa		10.47	□□□□□ -0.73
RBM19-206	ENST00000552386	PLEKHF1	Q96S99	279 aa		10.47	□□□□□ -0.73
RBM19-206	ENST00000552386	ATG3	Q9NT62	314 aa		10.47	□□□□□ -0.73
RBM19-206	ENST00000552386	SPG7	Q9UQ90	795 aa		10.47	□□□□□ -0.73
RBM19-206	ENST00000552386	USP42	Q9H9J4	1324 aa	Known RBP	10.47	□□□□□ -0.73
RBM19-206	ENST00000552386	NCAPD2	Q15021	1401 aa		10.47	□□□□□ -0.73
RBM19-206	ENST00000552386	ADAMTS7	Q9UKP4	1686 aa		10.47	□□□□□ -0.73
RBM19-206	ENST00000552386	ADAMTSL1	Q8N6G6	1762 aa		10.47	□□□□□ -0.73
RBM19-206	ENST00000552386	IQCA1L	A6NCM1	817 aa		10.46	□□□□□ -0.73
RBM19-206	ENST00000552386	ATMIN	O43313	823 aa	Predicted RBP	10.46	□□□□□ -0.73
RBM19-206	ENST00000552386	TMPO	P42166	694 aa	Known RBP	10.46	□□□□□ -0.73
RBM19-206	ENST00000552386	CALD1	Q05682	793 aa	Known RBP	10.46	□□□□□ -0.73
RBM19-206	ENST00000552386	DEFB115	Q30KQ5	88 aa		10.46	□□□□□ -0.73
RBM19-206	ENST00000552386	TTLL6	Q8N841	843 aa		10.46	□□□□□ -0.73
RBM19-206	ENST00000552386	CLUAP1	Q96AJ1	413 aa		10.46	□□□□□ -0.73
RBM19-206	ENST00000552386	BEGAIN	Q9BUH8	593 aa		10.46	□□□□□ -0.73
RBM19-206	ENST00000552386	KIF24	Q5T7B8	1368 aa		10.46	□□□□□ -0.74
RBM19-206	ENST00000552386	LTBP1	Q14766	1721 aa		10.46	□□□□□ -0.74
RBM19-206	ENST00000552386	FLT4	P35916	1363 aa		10.45	□□□□□ -0.74
RBM19-206	ENST00000552386	WDR33	Q9C0J8	1336 aa	Known RBP	10.45	□□□□□ -0.74
RBM19-206	ENST00000552386	POLRMT	O00411	1230 aa	Known RBP	10.45	□□□□□ -0.74
RBM19-206	ENST00000552386	FBLN1	P23142	703 aa		10.45	□□□□□ -0.74
RBM19-206	ENST00000552386	RRS1	Q15050	365 aa	Known RBP	10.45	□□□□□ -0.74
RBM19-206	ENST00000552386	ERFE	Q4G0M1	354 aa		10.45	□□□□□ -0.74
RBM19-206	ENST00000552386	STK24	Q9Y6E0	443 aa		10.45	□□□□□ -0.74
RBM19-206	ENST00000552386	CASP8AP2	Q9UKL3	1982 aa		10.45	□□□□□ -0.74
RBM19-206	ENST00000552386	TJP1	Q07157	1748 aa		10.44	□□□□□ -0.74
RBM19-206	ENST00000552386	ITGBL1	O95965	494 aa	Predicted RBP	10.44	□□□□□ -0.74
RBM19-206	ENST00000552386	PRPF38B	Q5VTL8	546 aa	Known RBP	10.44	□□□□□ -0.74
RBM19-206	ENST00000552386	FRAT1	Q92837	279 aa	Predicted RBP	10.44	□□□□□ -0.74
RBM19-206	ENST00000552386	SLC4A9	Q96Q91	983 aa		10.44	□□□□□ -0.74
RBM19-206	ENST00000552386	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	10.44	□□□□□ -0.74	1e-6	■□□□□ 10
RBM19-206	ENST00000552386	SRP68	Q9UHB9	627 aa	Known RBP	10.44	□□□□□ -0.74
RBM19-206	ENST00000552386	CACNA1S	Q13698	1873 aa		10.44	□□□□□ -0.74
RBM19-206	ENST00000552386	TRPM7	Q96QT4	1865 aa		10.44	□□□□□ -0.74
RBM19-206	ENST00000552386	TM4SF1	P30408	202 aa		10.43	□□□□□ -0.74
RBM19-206	ENST00000552386	LMOD3	Q0VAK6	560 aa		10.43	□□□□□ -0.74
RBM19-206	ENST00000552386	ZKSCAN2	Q63HK3	967 aa		10.43	□□□□□ -0.74
RBM19-206	ENST00000552386	MCOLN1	Q9GZU1	580 aa		10.43	□□□□□ -0.74
RBM19-206	ENST00000552386	ARFGEF2	Q9Y6D5	1785 aa		10.43	□□□□□ -0.74
RBM19-206	ENST00000552386	ANKRD31	Q8N7Z5	1873 aa		10.42	□□□□□ -0.74
RBM19-206	ENST00000552386	COL11A2	P13942	1736 aa	Predicted RBP	10.42	□□□□□ -0.74
RBM19-206	ENST00000552386	KIF16B	Q96L93	1317 aa		10.42	□□□□□ -0.74
RBM19-206	ENST00000552386	LTBP3	Q9NS15	1303 aa		10.42	□□□□□ -0.74
RBM19-206	ENST00000552386	DDN	O94850	711 aa	Predicted RBP	10.42	□□□□□ -0.74
RBM19-206	ENST00000552386	ATN1	P54259	1190 aa	Predicted RBP	10.42	□□□□□ -0.74
RBM19-206	ENST00000552386	HSP90AB2P	Q58FF8	381 aa		10.42	□□□□□ -0.74
RBM19-206	ENST00000552386	IFNL2	Q8IZJ0	200 aa		10.42	□□□□□ -0.74
RBM19-206	ENST00000552386	PANK1	Q8TE04	598 aa		10.42	□□□□□ -0.74
RBM19-206	ENST00000552386	ZNF428	Q96B54	188 aa		10.42	□□□□□ -0.74
RBM19-206	ENST00000552386	L3MBTL3	Q96JM7	780 aa	Predicted RBP	10.42	□□□□□ -0.74
RBM19-206	ENST00000552386	RSPH6A	Q9H0K4	717 aa		10.42	□□□□□ -0.74
RBM19-206	ENST00000552386	TAF1D	Q9H5J8	278 aa	Predicted RBP	10.42	□□□□□ -0.74
RBM19-206	ENST00000552386	POLK	Q9UBT6	870 aa		10.42	□□□□□ -0.74
RBM19-206	ENST00000552386	TRIM35	Q9UPQ4	493 aa		10.42	□□□□□ -0.74
RBM19-206	ENST00000552386	COG6	Q9Y2V7	657 aa		10.42	□□□□□ -0.74
RBM19-206	ENST00000552386	PHKG2	P15735	406 aa		10.41	□□□□□ -0.74
RBM19-206	ENST00000552386	ECE1	P42892	770 aa		10.41	□□□□□ -0.74
RBM19-206	ENST00000552386	RIPK4	P57078	832 aa		10.41	□□□□□ -0.74
RBM19-206	ENST00000552386	NPM2	Q86SE8	214 aa	Known RBP	10.41	□□□□□ -0.74
RBM19-206	ENST00000552386	FTSJ3	Q8IY81	847 aa	Known RBP	10.41	□□□□□ -0.74
RBM19-206	ENST00000552386	SMC4	Q9NTJ3	1288 aa		10.41	□□□□□ -0.74
RBM19-206	ENST00000552386	ABT1	Q9ULW3	272 aa	Known RBP	10.41	□□□□□ -0.74
RBM19-206	ENST00000552386		H0YIN7	160 aa		10.4	□□□□□ -0.74
RBM19-206	ENST00000552386	CA12	O43570	354 aa		10.4	□□□□□ -0.74
RBM19-206	ENST00000552386	PRKAR2B	P31323	418 aa		10.4	□□□□□ -0.74
RBM19-206	ENST00000552386	CRKL	P46109	303 aa	Known RBP	10.4	□□□□□ -0.74
RBM19-206	ENST00000552386	MVP	Q14764	893 aa	Known RBP	10.4	□□□□□ -0.74
RBM19-206	ENST00000552386	NFE2L2	Q16236	605 aa		10.4	□□□□□ -0.74
RBM19-206	ENST00000552386	C2CD5	Q86YS7	1000 aa		10.4	□□□□□ -0.74
RBM19-206	ENST00000552386	BBX	Q8WY36	941 aa	Predicted RBP	10.4	□□□□□ -0.74
RBM19-206	ENST00000552386	RWDD1	Q9H446	243 aa	Predicted RBP	10.4	□□□□□ -0.74
RBM19-206	ENST00000552386	ERVV-2	B6SEH9	535 aa		10.39	□□□□□ -0.75
RBM19-206	ENST00000552386	IPO8	O15397	1037 aa	Known RBP	10.39	□□□□□ -0.75
RBM19-206	ENST00000552386	ZPR1	O75312	459 aa		10.39	□□□□□ -0.75
RBM19-206	ENST00000552386	EXOSC9	Q06265	439 aa	Known RBP	10.39	□□□□□ -0.75
RBM19-206	ENST00000552386	ALDH1L2	Q3SY69	923 aa		10.39	□□□□□ -0.75
RBM19-206	ENST00000552386	EAPP	Q56P03	285 aa	Predicted RBP	10.39	□□□□□ -0.75
RBM19-206	ENST00000552386	IER5L	Q5T953	404 aa		10.39	□□□□□ -0.75
RBM19-206	ENST00000552386	DZIP1L	Q8IYY4	767 aa	Known RBP	10.39	□□□□□ -0.75
RBM19-206	ENST00000552386	TSR2	Q969E8	191 aa	Known RBP	10.39	□□□□□ -0.75
RBM19-206	ENST00000552386	CAPNS2	Q96L46	248 aa		10.39	□□□□□ -0.75
RBM19-206	ENST00000552386	TAOK3	Q9H2K8	898 aa		10.39	□□□□□ -0.75
RBM19-206	ENST00000552386	PPM1G	O15355	546 aa	Predicted RBP	10.38	□□□□□ -0.75
RBM19-206	ENST00000552386	IL13	P35225	146 aa		10.38	□□□□□ -0.75
RBM19-206	ENST00000552386	C8orf34	Q49A92	452 aa		10.38	□□□□□ -0.75
RBM19-206	ENST00000552386	GPR101	Q96P66	508 aa	Predicted RBP	10.38	□□□□□ -0.75
RBM19-206	ENST00000552386	CHMP4B	Q9H444	224 aa	Known RBP	10.38	□□□□□ -0.75
RBM19-206	ENST00000552386	DDX19B	Q9UMR2	479 aa		10.38	□□□□□ -0.75
RBM19-206	ENST00000552386	PDZRN3	Q9UPQ7	1066 aa		10.38	□□□□□ -0.75
RBM19-206	ENST00000552386	RGS3	P49796	1198 aa		10.37	□□□□□ -0.75
RBM19-206	ENST00000552386	GNAI1	P63096	354 aa		10.37	□□□□□ -0.75
RBM19-206	ENST00000552386	MKRN3	Q13064	507 aa	Known RBP	10.37	□□□□□ -0.75
RBM19-206	ENST00000552386	DGKZ	Q13574	1117 aa		10.37	□□□□□ -0.75
RBM19-206	ENST00000552386	ATF7IP	Q6VMQ6	1270 aa		10.37	□□□□□ -0.75
RBM19-206	ENST00000552386	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	10.37	□□□□□ -0.75
RBM19-206	ENST00000552386	PNMA8A	Q86V59	439 aa	Predicted RBP	10.37	□□□□□ -0.75
RBM19-206	ENST00000552386	CNTROB	Q8N137	903 aa		10.37	□□□□□ -0.75
RBM19-206	ENST00000552386	BCL2L13	Q9BXK5	485 aa		10.37	□□□□□ -0.75
RBM19-206	ENST00000552386	IFT57	Q9NWB7	429 aa		10.37	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 307.8 ms