RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 KRTAP4-12Q9BQ66 201 aa8.44□□□□□ -1.06
USP44-207ENST00000552237 HIF1AQ16665 826 aa8.43□□□□□ -1.06
USP44-207ENST00000552237 DMRTC2Q8IXT2 367 aaPredicted RBP8.43□□□□□ -1.06
USP44-207ENST00000552237 FMR1NBQ8N0W7 255 aaPredicted RBP8.43□□□□□ -1.06
USP44-207ENST00000552237 RGS9O75916 674 aaPredicted RBP8.42□□□□□ -1.06
USP44-207ENST00000552237 HIRAP54198 1017 aaPredicted RBP8.42□□□□□ -1.06
USP44-207ENST00000552237 CCDC102BQ68D86 513 aa8.42□□□□□ -1.06
USP44-207ENST00000552237 DNAJB12Q9NXW2 375 aaKnown RBP8.42□□□□□ -1.06
USP44-207ENST00000552237 RBM19Q9Y4C8 960 aaKnown RBP8.42□□□□□ -1.06
USP44-207ENST00000552237 BTBD11A6QL63 1104 aa8.41□□□□□ -1.06
USP44-207ENST00000552237 PPP1R12BO60237 982 aaPredicted RBP8.41□□□□□ -1.06
USP44-207ENST00000552237 AFF1P51825 1210 aaKnown RBP8.41□□□□□ -1.06
USP44-207ENST00000552237 EFCC1Q9HA90 598 aa8.41□□□□□ -1.06
USP44-207ENST00000552237 MCM6Q14566 821 aa8.4□□□□□ -1.06
USP44-207ENST00000552237 BTLAQ7Z6A9 289 aa8.4□□□□□ -1.06
USP44-207ENST00000552237 ALG2Q9H553 416 aa8.4□□□□□ -1.06
USP44-207ENST00000552237 NGLY1Q96IV0 654 aa8.39□□□□□ -1.07
USP44-207ENST00000552237 KIAA1024Q9UPX6 916 aa8.39□□□□□ -1.07
USP44-207ENST00000552237 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.39□□□□□ -1.07
USP44-207ENST00000552237 ALDH16A1Q8IZ83 802 aa8.38□□□□□ -1.07
USP44-207ENST00000552237 NAGPAQ9UK23 515 aa8.38□□□□□ -1.07
USP44-207ENST00000552237 NFKB1P19838 968 aa8.37□□□□□ -1.07
USP44-207ENST00000552237 IREB2P48200 963 aaKnown RBP8.37□□□□□ -1.07
USP44-207ENST00000552237 PCSK7Q16549 785 aa8.37□□□□□ -1.07
USP44-207ENST00000552237 MSL1Q68DK7 614 aa8.37□□□□□ -1.07
USP44-207ENST00000552237 FAM35AQ86V20 835 aa8.37□□□□□ -1.07
USP44-207ENST00000552237 SSBP4Q9BWG4 385 aaPredicted RBP8.37□□□□□ -1.07
USP44-207ENST00000552237 RNF112Q9ULX5 631 aa8.37□□□□□ -1.07
USP44-207ENST00000552237 COG6Q9Y2V7 657 aa8.37□□□□□ -1.07
USP44-207ENST00000552237 USP17L3A6NCW0 530 aa8.36□□□□□ -1.07
USP44-207ENST00000552237 USP17L4A6NCW7 530 aa8.36□□□□□ -1.07
USP44-207ENST00000552237 M0R2N6 131 aa8.36□□□□□ -1.07
USP44-207ENST00000552237 CPB1P15086 417 aa8.36□□□□□ -1.07
USP44-207ENST00000552237 CCINQ13939 588 aa8.36□□□□□ -1.07
USP44-207ENST00000552237 USP17L2Q6R6M4 530 aa8.36□□□□□ -1.07
USP44-207ENST00000552237 USP17L1Q7RTZ2 530 aa8.36□□□□□ -1.07
USP44-207ENST00000552237 DTWD1Q8N5C7 304 aa8.36□□□□□ -1.07
USP44-207ENST00000552237 TSEN2Q8NCE0 465 aaKnown RBP8.36□□□□□ -1.07
USP44-207ENST00000552237 WFDC12Q8WWY7 111 aa8.36□□□□□ -1.07
USP44-207ENST00000552237 GOLGA2P5Q9HBQ8 144 aa8.36□□□□□ -1.07
USP44-207ENST00000552237 PALM3A6NDB9 673 aaPredicted RBP8.35□□□□□ -1.07
USP44-207ENST00000552237 ZBTB7BO15156 539 aaPredicted RBP8.35□□□□□ -1.07
USP44-207ENST00000552237 EPB42P16452 691 aa8.35□□□□□ -1.07
USP44-207ENST00000552237 CLDN10P78369 228 aa8.35□□□□□ -1.07
USP44-207ENST00000552237 POTEAQ6S8J7 498 aa8.35□□□□□ -1.07
USP44-207ENST00000552237 WFDC8Q8IUA0 241 aa8.35□□□□□ -1.07
USP44-207ENST00000552237 PLEKHM2Q8IWE5 1019 aa8.35□□□□□ -1.07
USP44-207ENST00000552237 LARGE2Q8N3Y3 721 aa8.35□□□□□ -1.07
USP44-207ENST00000552237 OGFOD1Q8N543 542 aa8.35□□□□□ -1.07
USP44-207ENST00000552237 CHMP7Q8WUX9 453 aaPredicted RBP8.35□□□□□ -1.07
USP44-207ENST00000552237 GSX2Q9BZM3 304 aa8.35□□□□□ -1.07
USP44-207ENST00000552237 PCMTD2Q9NV79 361 aa8.35□□□□□ -1.07
USP44-207ENST00000552237 MCTP1Q6DN14 999 aa8.34□□□□□ -1.07
USP44-207ENST00000552237 FBXO11Q86XK2 927 aa8.34□□□□□ -1.07
USP44-207ENST00000552237 ZNF594Q96JF6 807 aaPredicted RBP8.34□□□□□ -1.07
USP44-207ENST00000552237 ELMSAN1Q6PJG2 1045 aa8.33□□□□□ -1.08
USP44-207ENST00000552237 NOS3P29474 1203 aa8.32□□□□□ -1.08
USP44-207ENST00000552237 SCG3Q8WXD2 468 aaKnown RBP8.32□□□□□ -1.08
USP44-207ENST00000552237 PAX4O43316 350 aa8.31□□□□□ -1.08
USP44-207ENST00000552237 RAD21O60216 631 aa8.31□□□□□ -1.08
USP44-207ENST00000552237 IER5Q5VY09 327 aa8.31□□□□□ -1.08
USP44-207ENST00000552237 IGF2-ASQ6U949 168 aa8.31□□□□□ -1.08
USP44-207ENST00000552237 PRR23CQ6ZRP0 262 aa8.31□□□□□ -1.08
USP44-207ENST00000552237 KRT25Q7Z3Z0 450 aa8.31□□□□□ -1.08
USP44-207ENST00000552237 STAG2Q8N3U4 1231 aa8.31□□□□□ -1.08
USP44-207ENST00000552237 C2orf49Q9BVC5 232 aaPredicted RBP8.31□□□□□ -1.08
USP44-207ENST00000552237 FRRS1LQ9P0K9 344 aa8.31□□□□□ -1.08
USP44-207ENST00000552237 MKRN1Q9UHC7 482 aaKnown RBP8.31□□□□□ -1.08
USP44-207ENST00000552237 ATAD2Q6PL18 1390 aa8.31□□□□□ -1.08
USP44-207ENST00000552237 TGFBR3LH3BV60 316 aa8.3□□□□□ -1.08
USP44-207ENST00000552237 C21orf2O43822 256 aa8.3□□□□□ -1.08
USP44-207ENST00000552237 RTN1Q16799 776 aa8.3□□□□□ -1.08
USP44-207ENST00000552237 SIX5Q8N196 739 aa8.3□□□□□ -1.08
USP44-207ENST00000552237 MEGF10Q96KG7 1140 aa8.3□□□□□ -1.08
USP44-207ENST00000552237 LPIN3Q9BQK8 851 aa8.3□□□□□ -1.08
USP44-207ENST00000552237 ATP9BO43861 1147 aa8.29□□□□□ -1.08
USP44-207ENST00000552237 ARID4AP29374 1257 aaPredicted RBP8.29□□□□□ -1.08
USP44-207ENST00000552237 TPRNQ4KMQ1 711 aa8.29□□□□□ -1.08
USP44-207ENST00000552237 PERM1Q5SV97 790 aa8.29□□□□□ -1.08
USP44-207ENST00000552237 DHX32Q7L7V1 743 aaKnown RBP8.29□□□□□ -1.08
USP44-207ENST00000552237 KRTAP19-1Q8IUB9 90 aa8.29□□□□□ -1.08
USP44-207ENST00000552237 GAS2L2Q8NHY3 880 aa8.29□□□□□ -1.08
USP44-207ENST00000552237 SSTR4P31391 388 aa8.28□□□□□ -1.08
USP44-207ENST00000552237 MLLT1Q03111 559 aaPredicted RBP8.28□□□□□ -1.08
USP44-207ENST00000552237 MAP3K6O95382 1288 aa8.27□□□□□ -1.09
USP44-207ENST00000552237 RARAP10276 462 aa8.27□□□□□ -1.09
USP44-207ENST00000552237 FSTP19883 344 aa8.27□□□□□ -1.09
USP44-207ENST00000552237 GRIK5Q16478 980 aa8.27□□□□□ -1.09
USP44-207ENST00000552237 AKTIPQ9H8T0 292 aa8.27□□□□□ -1.09
USP44-207ENST00000552237 PTCD1O75127 700 aaKnown RBP8.26□□□□□ -1.09
USP44-207ENST00000552237 EIF2AK2P19525 551 aaKnown RBP8.26□□□□□ -1.09
USP44-207ENST00000552237 SEC13P55735 322 aa8.26□□□□□ -1.09
USP44-207ENST00000552237 ILDR2Q71H61 639 aa8.26□□□□□ -1.09
USP44-207ENST00000552237 POM121Q96HA1 1249 aa8.26□□□□□ -1.09
USP44-207ENST00000552237 HINFPQ9BQA5 517 aa8.26□□□□□ -1.09
USP44-207ENST00000552237 SMG9Q9H0W8 520 aaKnown RBP8.26□□□□□ -1.09
USP44-207ENST00000552237 POM121CA8CG34 1229 aa8.25□□□□□ -1.09
USP44-207ENST00000552237 RASA1P20936 1047 aa8.25□□□□□ -1.09
USP44-207ENST00000552237 TXKP42681 527 aa8.25□□□□□ -1.09
USP44-207ENST00000552237 IDH3AP50213 366 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms