RNA–Protein interactions for RNA: ENST00000552022.5

CACNB3-221, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 564 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-221ENST00000552022 LARGE2Q8N3Y3 721 aa17.2■□□□□ 0.34
CACNB3-221ENST00000552022 GLIS2Q9BZE0 524 aaPredicted RBP17.2■□□□□ 0.34
CACNB3-221ENST00000552022 KNSTRNQ9Y448 316 aa17.2■□□□□ 0.34
CACNB3-221ENST00000552022 DIAPH1O60610 1272 aaKnown RBP17.19■□□□□ 0.34
CACNB3-221ENST00000552022 SOX10P56693 466 aa17.19■□□□□ 0.34
CACNB3-221ENST00000552022 SLC51AQ86UW1 340 aa17.19■□□□□ 0.34
CACNB3-221ENST00000552022 ADARB2Q9NS39 739 aaKnown RBP17.19■□□□□ 0.34
CACNB3-221ENST00000552022 GPRC5DQ9NZD1 345 aa17.19■□□□□ 0.34
CACNB3-221ENST00000552022 CEMIPQ8WUJ3 1361 aa17.18■□□□□ 0.34
CACNB3-221ENST00000552022 BTBD11A6QL63 1104 aa17.18■□□□□ 0.34
CACNB3-221ENST00000552022 NBPF26B4DH59 902 aa17.18■□□□□ 0.34
CACNB3-221ENST00000552022 RGL2O15211 777 aa17.18■□□□□ 0.34
CACNB3-221ENST00000552022 HLFQ16534 295 aa17.18■□□□□ 0.34
CACNB3-221ENST00000552022 AMER1Q5JTC6 1135 aaPredicted RBP17.18■□□□□ 0.34
CACNB3-221ENST00000552022 NBPF10Q6P3W6 841 aaKnown RBP17.18■□□□□ 0.34
CACNB3-221ENST00000552022 NBPF15Q8N660 670 aa17.18■□□□□ 0.34
CACNB3-221ENST00000552022 PGAP2Q9UHJ9 254 aa17.18■□□□□ 0.34
CACNB3-221ENST00000552022 GTF2E1P29083 439 aaPredicted RBP17.17■□□□□ 0.34
CACNB3-221ENST00000552022 NUP98P52948 1817 aa17.17■□□□□ 0.34
CACNB3-221ENST00000552022 HOXA10P31260 410 aaPredicted RBP17.16■□□□□ 0.34
CACNB3-221ENST00000552022 GAS2L2Q8NHY3 880 aa17.16■□□□□ 0.34
CACNB3-221ENST00000552022 ABCC12Q96J65 1359 aa17.15■□□□□ 0.34
CACNB3-221ENST00000552022 POLR2AP24928 1970 aaKnown RBP17.15■□□□□ 0.34
CACNB3-221ENST00000552022 NOGQ13253 232 aa17.15■□□□□ 0.34
CACNB3-221ENST00000552022 GRIPAP1Q4V328 841 aa17.15■□□□□ 0.34
CACNB3-221ENST00000552022 PRPF38BQ5VTL8 546 aaKnown RBP17.15■□□□□ 0.34
CACNB3-221ENST00000552022 NUTM1Q86Y26 1132 aa17.15■□□□□ 0.34
CACNB3-221ENST00000552022 NIM1KQ8IY84 436 aa17.15■□□□□ 0.34
CACNB3-221ENST00000552022 ZNF408Q9H9D4 720 aa17.15■□□□□ 0.34
CACNB3-221ENST00000552022 SNRPA1P09661 255 aaKnown RBP17.14■□□□□ 0.33
CACNB3-221ENST00000552022 HSPA5P11021 654 aaKnown RBP17.14■□□□□ 0.33
CACNB3-221ENST00000552022 HIRAP54198 1017 aaPredicted RBP17.14■□□□□ 0.33
CACNB3-221ENST00000552022 CXCL9Q07325 125 aa17.14■□□□□ 0.33
CACNB3-221ENST00000552022 NPC1L1Q9UHC9 1359 aa17.14■□□□□ 0.33
CACNB3-221ENST00000552022 AKAP11Q9UKA4 1901 aa17.13■□□□□ 0.33
CACNB3-221ENST00000552022 TCERG1O14776 1098 aaKnown RBP17.13■□□□□ 0.33
CACNB3-221ENST00000552022 GMPSP49915 693 aaPredicted RBP17.13■□□□□ 0.33
CACNB3-221ENST00000552022 RPGRQ92834 1020 aaKnown RBP17.13■□□□□ 0.33
CACNB3-221ENST00000552022 PPIP5K2O43314 1243 aa17.12■□□□□ 0.33
CACNB3-221ENST00000552022 AOC3Q16853 763 aa17.12■□□□□ 0.33
CACNB3-221ENST00000552022 CDC37L1Q7L3B6 337 aa17.12■□□□□ 0.33
CACNB3-221ENST00000552022 ZC3H15Q8WU90 426 aaKnown RBP17.12■□□□□ 0.33
CACNB3-221ENST00000552022 KIF7Q2M1P5 1343 aa17.12■□□□□ 0.33
CACNB3-221ENST00000552022 FAM155AB1AL88 458 aaPredicted RBP17.11■□□□□ 0.33
CACNB3-221ENST00000552022 PPEF1O14829 653 aaPredicted RBP17.11■□□□□ 0.33
CACNB3-221ENST00000552022 EIF4G2P78344 907 aaKnown RBP eCLIP17.11■□□□□ 0.33
CACNB3-221ENST00000552022 DLK2Q6UY11 383 aa17.11■□□□□ 0.33
CACNB3-221ENST00000552022 PHACTR3Q96KR7 559 aa17.11■□□□□ 0.33
CACNB3-221ENST00000552022 CRAMP1Q96RY5 1269 aa17.11■□□□□ 0.33
CACNB3-221ENST00000552022 NYXQ9GZU5 481 aa17.11■□□□□ 0.33
CACNB3-221ENST00000552022 ZNRF3Q9ULT6 936 aa17.11■□□□□ 0.33
CACNB3-221ENST00000552022 TIMELESSQ9UNS1 1208 aa17.11■□□□□ 0.33
CACNB3-221ENST00000552022 RIC1Q4ADV7 1423 aa17.11■□□□□ 0.33
CACNB3-221ENST00000552022 COL3A1P02461 1466 aaPredicted RBP17.11■□□□□ 0.33
CACNB3-221ENST00000552022 U2SURPO15042 1029 aaKnown RBP17.1■□□□□ 0.33
CACNB3-221ENST00000552022 HUNKP57058 714 aa17.1■□□□□ 0.33
CACNB3-221ENST00000552022 SAGE1Q9NXZ1 904 aa17.1■□□□□ 0.33
CACNB3-221ENST00000552022 C3orf67Q6ZVT6 689 aa17.09■□□□□ 0.33
CACNB3-221ENST00000552022 TRPM4Q8TD43 1214 aa17.09■□□□□ 0.33
CACNB3-221ENST00000552022 RBM17Q96I25 401 aaKnown RBP17.09■□□□□ 0.33
CACNB3-221ENST00000552022 VPS33BQ9H267 617 aa17.09■□□□□ 0.33
CACNB3-221ENST00000552022 USP48Q86UV5 1035 aa17.08■□□□□ 0.32
CACNB3-221ENST00000552022 RNF186Q9NXI6 227 aa17.08■□□□□ 0.32
CACNB3-221ENST00000552022 SHTN1A0MZ66 631 aa17.07■□□□□ 0.32
CACNB3-221ENST00000552022 TRPA1O75762 1119 aa17.07■□□□□ 0.32
CACNB3-221ENST00000552022 KIF23Q02241 960 aaPredicted RBP17.07■□□□□ 0.32
CACNB3-221ENST00000552022 UBN2Q6ZU65 1347 aa17.06■□□□□ 0.32
CACNB3-221ENST00000552022 CDHR2Q9BYE9 1310 aa17.06■□□□□ 0.32
CACNB3-221ENST00000552022 ERVV-1B6SEH8 477 aa17.06■□□□□ 0.32
CACNB3-221ENST00000552022 SUSD4Q5VX71 490 aa17.06■□□□□ 0.32
CACNB3-221ENST00000552022 RGMBQ6NW40 437 aa17.06■□□□□ 0.32
CACNB3-221ENST00000552022 NGEFQ8N5V2 710 aa17.06■□□□□ 0.32
CACNB3-221ENST00000552022 BCL2L13Q9BXK5 485 aa17.06■□□□□ 0.32
CACNB3-221ENST00000552022 RTFDC1Q9BY42 306 aaPredicted RBP17.06■□□□□ 0.32
CACNB3-221ENST00000552022 CNOT7Q9UIV1 285 aaKnown RBP17.06■□□□□ 0.32
CACNB3-221ENST00000552022 ATP6V0A2Q9Y487 856 aa17.06■□□□□ 0.32
CACNB3-221ENST00000552022 LAMB4A4D0S4 1761 aa17.05■□□□□ 0.32
CACNB3-221ENST00000552022 RAD17O75943 681 aa17.05■□□□□ 0.32
CACNB3-221ENST00000552022 CC2D1BQ5T0F9 858 aaKnown RBP17.05■□□□□ 0.32
CACNB3-221ENST00000552022 MCM10Q7L590 875 aa17.05■□□□□ 0.32
CACNB3-221ENST00000552022 IBTKQ9P2D0 1353 aaPredicted RBP17.04■□□□□ 0.32
CACNB3-221ENST00000552022 PER1O15534 1290 aaPredicted RBP17.04■□□□□ 0.32
CACNB3-221ENST00000552022 GPTP24298 496 aa17.04■□□□□ 0.32
CACNB3-221ENST00000552022 TTLL7Q6ZT98 887 aa17.04■□□□□ 0.32
CACNB3-221ENST00000552022 CTU1Q7Z7A3 348 aaKnown RBP17.04■□□□□ 0.32
CACNB3-221ENST00000552022 CCDC102AQ96A19 550 aa17.04■□□□□ 0.32
CACNB3-221ENST00000552022 MAP3K15Q6ZN16 1313 aa17.03■□□□□ 0.32
CACNB3-221ENST00000552022 NTSR2O95665 410 aa17.03■□□□□ 0.32
CACNB3-221ENST00000552022 PRKAR2BP31323 418 aa17.03■□□□□ 0.32
CACNB3-221ENST00000552022 TNIP1Q15025 636 aa17.03■□□□□ 0.32
CACNB3-221ENST00000552022 SUPT20HQ8NEM7 779 aa17.03■□□□□ 0.32
CACNB3-221ENST00000552022 CSRNP1Q96S65 589 aa17.03■□□□□ 0.32
CACNB3-221ENST00000552022 RSPH6AQ9H0K4 717 aa17.03■□□□□ 0.32
CACNB3-221ENST00000552022 GBA2Q9HCG7 927 aaPredicted RBP17.03■□□□□ 0.32
CACNB3-221ENST00000552022 YDJCA8MPS7 323 aa17.02■□□□□ 0.32
CACNB3-221ENST00000552022 ZNF157P51786 506 aaPredicted RBP17.02■□□□□ 0.32
CACNB3-221ENST00000552022 KIAA2012Q0VF49 1180 aa17.02■□□□□ 0.32
CACNB3-221ENST00000552022 ZNF34Q8IZ26 560 aa17.02■□□□□ 0.32
CACNB3-221ENST00000552022 C2orf69Q8N8R5 385 aa17.02■□□□□ 0.32
CACNB3-221ENST00000552022 TMX4Q9H1E5 349 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms