RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 FBLN1P23142 703 aa6.5□□□□□ -1.37
CCNT1-204ENST00000551989 CHMLP26374 656 aa6.5□□□□□ -1.37
CCNT1-204ENST00000551989 HSPA4P34932 840 aa6.5□□□□□ -1.37
CCNT1-204ENST00000551989 FKBP5Q13451 457 aaPredicted RBP6.5□□□□□ -1.37
CCNT1-204ENST00000551989 ZSCAN23Q3MJ62 389 aa6.5□□□□□ -1.37
CCNT1-204ENST00000551989 PPP4R3BQ5MIZ7 849 aa6.5□□□□□ -1.37
CCNT1-204ENST00000551989 MTERF4Q7Z6M4 381 aaKnown RBP6.5□□□□□ -1.37
CCNT1-204ENST00000551989 GAS2L3Q86XJ1 694 aa6.5□□□□□ -1.37
CCNT1-204ENST00000551989 ERC1Q8IUD2 1116 aa6.5□□□□□ -1.37
CCNT1-204ENST00000551989 CNTROBQ8N137 903 aa6.5□□□□□ -1.37
CCNT1-204ENST00000551989 NGDNQ8NEJ9 315 aaKnown RBP6.5□□□□□ -1.37
CCNT1-204ENST00000551989 OXER1Q8TDS5 423 aa6.5□□□□□ -1.37
CCNT1-204ENST00000551989 KIF1BPQ96EK5 621 aa6.5□□□□□ -1.37
CCNT1-204ENST00000551989 TMX3Q96JJ7 454 aa6.5□□□□□ -1.37
CCNT1-204ENST00000551989 NAP1L5Q96NT1 182 aaPredicted RBP6.5□□□□□ -1.37
CCNT1-204ENST00000551989 MAP7D2Q96T17 732 aa6.5□□□□□ -1.37
CCNT1-204ENST00000551989 EYA1Q99502 592 aa6.5□□□□□ -1.37
CCNT1-204ENST00000551989 CCDC39Q9UFE4 941 aa6.5□□□□□ -1.37
CCNT1-204ENST00000551989 NOL7Q9UMY1 257 aaKnown RBP6.5□□□□□ -1.37
CCNT1-204ENST00000551989 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.5□□□□□ -1.37
CCNT1-204ENST00000551989 SPEF2Q9C093 1822 aa6.5□□□□□ -1.37
CCNT1-204ENST00000551989 TRPM3Q9HCF6 1732 aaPredicted RBP6.5□□□□□ -1.37
CCNT1-204ENST00000551989 MRC1P22897 1456 aa6.49□□□□□ -1.37
CCNT1-204ENST00000551989 RFX7Q2KHR2 1363 aa6.49□□□□□ -1.37
CCNT1-204ENST00000551989 ALDH1L1O75891 902 aa6.49□□□□□ -1.37
CCNT1-204ENST00000551989 HOXC9P31274 260 aa6.49□□□□□ -1.37
CCNT1-204ENST00000551989 NEK4P51957 841 aa6.49□□□□□ -1.37
CCNT1-204ENST00000551989 MTX1Q13505 466 aa6.49□□□□□ -1.37
CCNT1-204ENST00000551989 MLECQ14165 292 aa6.49□□□□□ -1.37
CCNT1-204ENST00000551989 CAVIN1Q6NZI2 390 aaKnown RBP6.49□□□□□ -1.37
CCNT1-204ENST00000551989 SLC4A10Q6U841 1118 aa6.49□□□□□ -1.37
CCNT1-204ENST00000551989 TICAM2Q86XR7 235 aa6.49□□□□□ -1.37
CCNT1-204ENST00000551989 KCNH5Q8NCM2 988 aa6.49□□□□□ -1.37
CCNT1-204ENST00000551989 UBE2Q2Q8WVN8 375 aa6.49□□□□□ -1.37
CCNT1-204ENST00000551989 GPATCH3Q96I76 525 aa6.49□□□□□ -1.37
CCNT1-204ENST00000551989 ZSCAN31Q96LW9 406 aaPredicted RBP6.49□□□□□ -1.37
CCNT1-204ENST00000551989 AMOTL2Q9Y2J4 779 aa6.49□□□□□ -1.37
CCNT1-204ENST00000551989 MST1RQ04912 1400 aa6.49□□□□□ -1.37
CCNT1-204ENST00000551989 TBC1D12O60347 775 aa6.48□□□□□ -1.37
CCNT1-204ENST00000551989 OFD1O75665 1012 aa6.48□□□□□ -1.37
CCNT1-204ENST00000551989 GLRX3O76003 335 aaKnown RBP6.48□□□□□ -1.37
CCNT1-204ENST00000551989 NKX1-1Q15270 411 aaPredicted RBP6.48□□□□□ -1.37
CCNT1-204ENST00000551989 AMOTQ4VCS5 1084 aa6.48□□□□□ -1.37
CCNT1-204ENST00000551989 HDGFL1Q5TGJ6 251 aa6.48□□□□□ -1.37
CCNT1-204ENST00000551989 C16orf71Q8IYS4 520 aaPredicted RBP6.48□□□□□ -1.37
CCNT1-204ENST00000551989 TM6SF1Q9BZW5 370 aa6.48□□□□□ -1.37
CCNT1-204ENST00000551989 CRISPLD2Q9H0B8 497 aa6.48□□□□□ -1.37
CCNT1-204ENST00000551989 ANO2Q9NQ90 1003 aa6.48□□□□□ -1.37
CCNT1-204ENST00000551989 SH2B1Q9NRF2 756 aaPredicted RBP6.48□□□□□ -1.37
CCNT1-204ENST00000551989 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.48□□□□□ -1.37
CCNT1-204ENST00000551989 CCDC171Q6TFL3 1326 aa6.48□□□□□ -1.37
CCNT1-204ENST00000551989 NCKAP5LQ9HCH0 1330 aa6.48□□□□□ -1.37
CCNT1-204ENST00000551989 PKD1L3Q7Z443 1732 aa6.47□□□□□ -1.37
CCNT1-204ENST00000551989 ALS2Q96Q42 1657 aa6.47□□□□□ -1.37
CCNT1-204ENST00000551989 TRIM6-TRIM34B2RNG4 842 aa6.47□□□□□ -1.37
CCNT1-204ENST00000551989 SGSM2O43147 1006 aa6.47□□□□□ -1.37
CCNT1-204ENST00000551989 SMARCA5O60264 1052 aaPredicted RBP6.47□□□□□ -1.37
CCNT1-204ENST00000551989 PRPF40AO75400 957 aaKnown RBP6.47□□□□□ -1.37
CCNT1-204ENST00000551989 TPM3P06753 285 aa6.47□□□□□ -1.37
CCNT1-204ENST00000551989 LTKP29376 864 aa6.47□□□□□ -1.37
CCNT1-204ENST00000551989 KRT24Q2M2I5 525 aa6.47□□□□□ -1.37
CCNT1-204ENST00000551989 KIAA1211Q6ZU35 1233 aa6.47□□□□□ -1.37
CCNT1-204ENST00000551989 G2E3Q7L622 706 aa6.47□□□□□ -1.37
CCNT1-204ENST00000551989 RHPN1Q8TCX5 695 aa6.47□□□□□ -1.37
CCNT1-204ENST00000551989 OTUD7AQ8TE49 926 aaPredicted RBP6.47□□□□□ -1.37
CCNT1-204ENST00000551989 IP6K1Q92551 441 aa6.47□□□□□ -1.37
CCNT1-204ENST00000551989 SLC4A5Q9BY07 1137 aa6.47□□□□□ -1.37
CCNT1-204ENST00000551989 TSPY26PQ9H489 355 aa6.47□□□□□ -1.37
CCNT1-204ENST00000551989 EXOC6BQ9Y2D4 811 aa6.47□□□□□ -1.37
CCNT1-204ENST00000551989 ZKSCAN5Q9Y2L8 839 aa6.47□□□□□ -1.37
CCNT1-204ENST00000551989 ZDHHC9Q9Y397 364 aa6.47□□□□□ -1.37
CCNT1-204ENST00000551989 ARFGEF2Q9Y6D5 1785 aa6.46□□□□□ -1.37
CCNT1-204ENST00000551989 COL15A1P39059 1388 aa6.46□□□□□ -1.37
CCNT1-204ENST00000551989 RPAP1Q9BWH6 1393 aaPredicted RBP6.46□□□□□ -1.37
CCNT1-204ENST00000551989 PNMA6EA0A0J9YXQ4 647 aa6.46□□□□□ -1.38
CCNT1-204ENST00000551989 F6X3S4 739 aa6.46□□□□□ -1.38
CCNT1-204ENST00000551989 AKAP4Q5JQC9 854 aa6.46□□□□□ -1.38
CCNT1-204ENST00000551989 CCDC183Q5T5S1 534 aa6.46□□□□□ -1.38
CCNT1-204ENST00000551989 ZGPATQ8N5A5 531 aaKnown RBP6.46□□□□□ -1.38
CCNT1-204ENST00000551989 GPT2Q8TD30 523 aa6.46□□□□□ -1.38
CCNT1-204ENST00000551989 DNAAF4Q8WXU2 420 aa6.46□□□□□ -1.38
CCNT1-204ENST00000551989 KCNB2Q92953 911 aa6.46□□□□□ -1.38
CCNT1-204ENST00000551989 RILPL2Q969X0 211 aa6.46□□□□□ -1.38
CCNT1-204ENST00000551989 USP44Q9H0E7 712 aa6.46□□□□□ -1.38
CCNT1-204ENST00000551989 SNRKQ9NRH2 765 aa6.46□□□□□ -1.38
CCNT1-204ENST00000551989 VPS9D1Q9Y2B5 631 aa6.46□□□□□ -1.38
CCNT1-204ENST00000551989 LRRFIP2Q9Y608 721 aaKnown RBP6.46□□□□□ -1.38
CCNT1-204ENST00000551989 RGPD5Q99666 1765 aa6.46□□□□□ -1.38
CCNT1-204ENST00000551989 ERBB4Q15303 1308 aa6.46□□□□□ -1.38
CCNT1-204ENST00000551989 LAMA4Q16363 1823 aa6.46□□□□□ -1.38
CCNT1-204ENST00000551989 C5P01031 1676 aa6.45□□□□□ -1.38
CCNT1-204ENST00000551989 HEG1Q9ULI3 1381 aa6.45□□□□□ -1.38
CCNT1-204ENST00000551989 DDX58O95786 925 aaKnown RBP6.45□□□□□ -1.38
CCNT1-204ENST00000551989 PDCP20941 246 aa6.45□□□□□ -1.38
CCNT1-204ENST00000551989 PRIM1P49642 420 aaKnown RBP6.45□□□□□ -1.38
CCNT1-204ENST00000551989 UBE2HP62256 183 aa6.45□□□□□ -1.38
CCNT1-204ENST00000551989 HSP90AA2PQ14568 343 aaPredicted RBP6.45□□□□□ -1.38
CCNT1-204ENST00000551989 ANKRD1Q15327 319 aa6.45□□□□□ -1.38
CCNT1-204ENST00000551989 PLEKHO1Q53GL0 409 aaPredicted RBP6.45□□□□□ -1.38
CCNT1-204ENST00000551989 VPS53Q5VIR6 699 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms