RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 BRIP1Q9BX63 1249 aa13.61□□□□□ -0.23
PTCH1-225ENST00000551845 NYXQ9GZU5 481 aa13.61□□□□□ -0.23
PTCH1-225ENST00000551845 RRAGCQ9HB90 399 aa13.61□□□□□ -0.23
PTCH1-225ENST00000551845 PDE6BP35913 854 aa13.6□□□□□ -0.23
PTCH1-225ENST00000551845 PRR5LQ6MZQ0 368 aa13.6□□□□□ -0.23
PTCH1-225ENST00000551845 PDZRN3Q9UPQ7 1066 aa13.6□□□□□ -0.23
PTCH1-225ENST00000551845 C10orf71Q711Q0 1435 aa13.59□□□□□ -0.23
PTCH1-225ENST00000551845 H0YIN7 160 aa13.59□□□□□ -0.23
PTCH1-225ENST00000551845 SUSD4Q5VX71 490 aa13.59□□□□□ -0.23
PTCH1-225ENST00000551845 KSR2Q6VAB6 950 aa13.59□□□□□ -0.23
PTCH1-225ENST00000551845 CCDC24Q8N4L8 307 aa13.59□□□□□ -0.23
PTCH1-225ENST00000551845 RNF181Q9P0P0 153 aa13.59□□□□□ -0.23
PTCH1-225ENST00000551845 HSPA1AP0DMV8 641 aaKnown RBP13.58□□□□□ -0.24
PTCH1-225ENST00000551845 HSPA1BP0DMV9 641 aaKnown RBP13.58□□□□□ -0.24
PTCH1-225ENST00000551845 SMC1BQ8NDV3 1235 aa13.58□□□□□ -0.24
PTCH1-225ENST00000551845 ZNF428Q96B54 188 aa13.58□□□□□ -0.24
PTCH1-225ENST00000551845 UTP14AQ9BVJ6 771 aaKnown RBP13.58□□□□□ -0.24
PTCH1-225ENST00000551845 PIM2Q9P1W9 311 aa13.58□□□□□ -0.24
PTCH1-225ENST00000551845 PI4KAP2A4QPH2 592 aa13.57□□□□□ -0.24
PTCH1-225ENST00000551845 CT47B1P0C2W7 299 aaPredicted RBP13.57□□□□□ -0.24
PTCH1-225ENST00000551845 TRIM28Q13263 835 aaKnown RBP13.57□□□□□ -0.24
PTCH1-225ENST00000551845 G2E3Q7L622 706 aa13.57□□□□□ -0.24
PTCH1-225ENST00000551845 C2CD5Q86YS7 1000 aa13.57□□□□□ -0.24
PTCH1-225ENST00000551845 PI4KAP1Q8N8J0 262 aa13.57□□□□□ -0.24
PTCH1-225ENST00000551845 ARFGEF1Q9Y6D6 1849 aa13.57□□□□□ -0.24
PTCH1-225ENST00000551845 BRCA1P38398 1863 aaKnown RBP13.57□□□□□ -0.24
PTCH1-225ENST00000551845 C4AP0C0L4 1744 aa13.56□□□□□ -0.24
PTCH1-225ENST00000551845 ATP5J2-PTCD1G3V325 749 aa13.56□□□□□ -0.24
PTCH1-225ENST00000551845 KCNA3P22001 575 aa13.56□□□□□ -0.24
PTCH1-225ENST00000551845 CHRNA5P30532 468 aa13.56□□□□□ -0.24
PTCH1-225ENST00000551845 NEXNQ0ZGT2 675 aa13.56□□□□□ -0.24
PTCH1-225ENST00000551845 FLIIQ13045 1269 aa13.56□□□□□ -0.24
PTCH1-225ENST00000551845 FKBP5Q13451 457 aaPredicted RBP13.56□□□□□ -0.24
PTCH1-225ENST00000551845 DALRD3Q5D0E6 543 aaKnown RBP13.56□□□□□ -0.24
PTCH1-225ENST00000551845 NLRP10Q86W26 655 aa13.56□□□□□ -0.24
PTCH1-225ENST00000551845 MYD88Q99836 296 aa13.56□□□□□ -0.24
PTCH1-225ENST00000551845 ISCA1Q9BUE6 129 aa13.56□□□□□ -0.24
PTCH1-225ENST00000551845 METTL22Q9BUU2 404 aaPredicted RBP13.56□□□□□ -0.24
PTCH1-225ENST00000551845 TRMT112Q9UI30 125 aaKnown RBP13.56□□□□□ -0.24
PTCH1-225ENST00000551845 MAP3K2Q9Y2U5 619 aa13.56□□□□□ -0.24
PTCH1-225ENST00000551845 TNRC6CQ9HCJ0 1690 aaKnown RBP13.56□□□□□ -0.24
PTCH1-225ENST00000551845 ERFEQ4G0M1 354 aa13.55□□□□□ -0.24
PTCH1-225ENST00000551845 NUTM1Q86Y26 1132 aa13.55□□□□□ -0.24
PTCH1-225ENST00000551845 ZNF622Q969S3 477 aaKnown RBP eCLIP13.55□□□□□ -0.24
PTCH1-225ENST00000551845 UBN2Q6ZU65 1347 aa13.55□□□□□ -0.24
PTCH1-225ENST00000551845 ALDH1L2Q3SY69 923 aa13.54□□□□□ -0.24
PTCH1-225ENST00000551845 SLC10A5Q5PT55 438 aa13.54□□□□□ -0.24
PTCH1-225ENST00000551845 NLRP3Q96P20 1036 aa13.54□□□□□ -0.24
PTCH1-225ENST00000551845 ZBED9Q6R2W3 1325 aa13.54□□□□□ -0.24
PTCH1-225ENST00000551845 KLRG2A4D1S0 409 aaPredicted RBP13.53□□□□□ -0.24
PTCH1-225ENST00000551845 NTSR2O95665 410 aa13.53□□□□□ -0.24
PTCH1-225ENST00000551845 MRPL50Q8N5N7 158 aaKnown RBP13.53□□□□□ -0.24
PTCH1-225ENST00000551845 TTLL6Q8N841 843 aa13.53□□□□□ -0.24
PTCH1-225ENST00000551845 CCDC191Q8NCU4 936 aa13.53□□□□□ -0.24
PTCH1-225ENST00000551845 DNAAF4Q8WXU2 420 aa13.53□□□□□ -0.24
PTCH1-225ENST00000551845 SSH1Q8WYL5 1049 aa13.53□□□□□ -0.24
PTCH1-225ENST00000551845 CNKSR1Q969H4 720 aa13.53□□□□□ -0.24
PTCH1-225ENST00000551845 MASTLQ96GX5 879 aa13.53□□□□□ -0.24
PTCH1-225ENST00000551845 RNF123Q5XPI4 1314 aa13.53□□□□□ -0.24
PTCH1-225ENST00000551845 SH3TC1Q8TE82 1336 aa13.53□□□□□ -0.24
PTCH1-225ENST00000551845 SRGNP10124 158 aa13.52□□□□□ -0.25
PTCH1-225ENST00000551845 HSP90B1P14625 803 aaKnown RBP13.52□□□□□ -0.25
PTCH1-225ENST00000551845 CWC25Q9NXE8 425 aaPredicted RBP13.52□□□□□ -0.25
PTCH1-225ENST00000551845 LAMB4A4D0S4 1761 aa13.52□□□□□ -0.25
PTCH1-225ENST00000551845 NPR1P16066 1061 aa13.51□□□□□ -0.25
PTCH1-225ENST00000551845 ALDH1B1P30837 517 aa13.51□□□□□ -0.25
PTCH1-225ENST00000551845 STYK1Q6J9G0 422 aa13.51□□□□□ -0.25
PTCH1-225ENST00000551845 ZBTB38Q8NAP3 1195 aaPredicted RBP13.51□□□□□ -0.25
PTCH1-225ENST00000551845 FAM89AQ96GI7 184 aa13.51□□□□□ -0.25
PTCH1-225ENST00000551845 SBF1O95248 1867 aa13.5□□□□□ -0.25
PTCH1-225ENST00000551845 IBTKQ9P2D0 1353 aaPredicted RBP13.5□□□□□ -0.25
PTCH1-225ENST00000551845 RTL5Q5HYW3 569 aaPredicted RBP13.5□□□□□ -0.25
PTCH1-225ENST00000551845 LINS1Q8NG48 757 aa13.5□□□□□ -0.25
PTCH1-225ENST00000551845 RPGRQ92834 1020 aaKnown RBP13.5□□□□□ -0.25
PTCH1-225ENST00000551845 SMC4Q9NTJ3 1288 aa13.5□□□□□ -0.25
PTCH1-225ENST00000551845 PTPRCP08575 1304 aa13.49□□□□□ -0.25
PTCH1-225ENST00000551845 F6X3S4 739 aa13.49□□□□□ -0.25
PTCH1-225ENST00000551845 IGKV5-2P06315 115 aa13.49□□□□□ -0.25
PTCH1-225ENST00000551845 HCLS1P14317 486 aaPredicted RBP13.49□□□□□ -0.25
PTCH1-225ENST00000551845 VEGFAP15692 232 aaPredicted RBP13.49□□□□□ -0.25
PTCH1-225ENST00000551845 RARSP54136 660 aaKnown RBP13.49□□□□□ -0.25
PTCH1-225ENST00000551845 RASSF7Q02833 373 aa13.49□□□□□ -0.25
PTCH1-225ENST00000551845 SYNE4Q8N205 404 aa13.49□□□□□ -0.25
PTCH1-225ENST00000551845 RBM17Q96I25 401 aaKnown RBP13.49□□□□□ -0.25
PTCH1-225ENST00000551845 BCL2L13Q9BXK5 485 aa13.49□□□□□ -0.25
PTCH1-225ENST00000551845 NEURL1BA8MQ27 555 aa13.48□□□□□ -0.25
PTCH1-225ENST00000551845 IRS4O14654 1257 aaPredicted RBP13.48□□□□□ -0.25
PTCH1-225ENST00000551845 PCCAP05165 728 aaPredicted RBP13.48□□□□□ -0.25
PTCH1-225ENST00000551845 BRPF1P55201 1214 aaPredicted RBP13.48□□□□□ -0.25
PTCH1-225ENST00000551845 CWF19L2Q2TBE0 894 aaKnown RBP13.48□□□□□ -0.25
PTCH1-225ENST00000551845 CRY2Q49AN0 593 aa13.48□□□□□ -0.25
PTCH1-225ENST00000551845 SLC4A10Q6U841 1118 aa13.48□□□□□ -0.25
PTCH1-225ENST00000551845 HOXA10P31260 410 aaPredicted RBP13.47□□□□□ -0.25
PTCH1-225ENST00000551845 GCKRQ14397 625 aa13.47□□□□□ -0.25
PTCH1-225ENST00000551845 BEND3Q5T5X7 828 aa13.47□□□□□ -0.25
PTCH1-225ENST00000551845 NOB1Q9ULX3 412 aaKnown RBP13.47□□□□□ -0.25
PTCH1-225ENST00000551845 ZC3H4Q9UPT8 1303 aaKnown RBP13.46□□□□□ -0.25
PTCH1-225ENST00000551845 GLTPD2A6NH11 291 aa13.46□□□□□ -0.25
PTCH1-225ENST00000551845 H7C1W4 665 aa13.46□□□□□ -0.25
PTCH1-225ENST00000551845 IPO8O15397 1037 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms