RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 CCDC39Q9UFE4 941 aa15.61■□□□□ 0.09
CACNB3-219ENST00000551544 ZKSCAN5Q9Y2L8 839 aa15.61■□□□□ 0.09
CACNB3-219ENST00000551544 ME3Q16798 604 aa15.61■□□□□ 0.09
CACNB3-219ENST00000551544 CCDC183Q5T5S1 534 aa15.61■□□□□ 0.09
CACNB3-219ENST00000551544 ZNF790Q6PG37 636 aa15.61■□□□□ 0.09
CACNB3-219ENST00000551544 JARID2Q92833 1246 aaPredicted RBP15.61■□□□□ 0.09
CACNB3-219ENST00000551544 NLRP2Q9NX02 1062 aa15.61■□□□□ 0.09
CACNB3-219ENST00000551544 ATP6V1DQ9Y5K8 247 aa15.61■□□□□ 0.09
CACNB3-219ENST00000551544 VPS37CA5D8V6 355 aaPredicted RBP15.6■□□□□ 0.09
CACNB3-219ENST00000551544 UBE2HP62256 183 aa15.6■□□□□ 0.09
CACNB3-219ENST00000551544 NEXNQ0ZGT2 675 aa15.6■□□□□ 0.09
CACNB3-219ENST00000551544 XAGE3Q8WTP9 111 aa15.6■□□□□ 0.09
CACNB3-219ENST00000551544 RAPGEF4Q8WZA2 1011 aa15.6■□□□□ 0.09
CACNB3-219ENST00000551544 TM6SF1Q9BZW5 370 aa15.6■□□□□ 0.09
CACNB3-219ENST00000551544 CRYBG1Q9Y4K1 1723 aa15.6■□□□□ 0.09
CACNB3-219ENST00000551544 OVOS2A0A0G2JMS6 1433 aa15.6■□□□□ 0.09
CACNB3-219ENST00000551544 PIP4K2AP48426 406 aaPredicted RBP15.6■□□□□ 0.09
CACNB3-219ENST00000551544 DNM1Q05193 864 aaKnown RBP15.6■□□□□ 0.09
CACNB3-219ENST00000551544 LARP1Q6PKG0 1096 aaKnown RBP15.6■□□□□ 0.09
CACNB3-219ENST00000551544 NFATC2IPQ8NCF5 419 aa15.6■□□□□ 0.09
CACNB3-219ENST00000551544 ZSCAN31Q96LW9 406 aaPredicted RBP15.6■□□□□ 0.09
CACNB3-219ENST00000551544 MYD88Q99836 296 aa15.6■□□□□ 0.09
CACNB3-219ENST00000551544 SH2B1Q9NRF2 756 aaPredicted RBP15.6■□□□□ 0.09
CACNB3-219ENST00000551544 UTYO14607 1347 aa15.6■□□□□ 0.09
CACNB3-219ENST00000551544 A0A0D9SFI3 127 aa15.59■□□□□ 0.09
CACNB3-219ENST00000551544 COL9A3Q14050 684 aaPredicted RBP15.59■□□□□ 0.09
CACNB3-219ENST00000551544 COPS6Q7L5N1 327 aa15.59■□□□□ 0.09
CACNB3-219ENST00000551544 TCEANC2Q96MN5 208 aa15.59■□□□□ 0.09
CACNB3-219ENST00000551544 MTMR6Q9Y217 621 aa15.59■□□□□ 0.09
CACNB3-219ENST00000551544 HIP1O00291 1037 aa15.59■□□□□ 0.09
CACNB3-219ENST00000551544 ZNF500O60304 480 aaPredicted RBP15.59■□□□□ 0.09
CACNB3-219ENST00000551544 ST3GAL1Q11201 340 aa15.59■□□□□ 0.09
CACNB3-219ENST00000551544 MPNDQ8N594 471 aa15.59■□□□□ 0.09
CACNB3-219ENST00000551544 MAP4K1Q92918 833 aa15.59■□□□□ 0.09
CACNB3-219ENST00000551544 KCNB2Q92953 911 aa15.59■□□□□ 0.09
CACNB3-219ENST00000551544 PHRF1Q9P1Y6 1649 aaKnown RBP15.59■□□□□ 0.09
CACNB3-219ENST00000551544 ERBB3P21860 1342 aa15.59■□□□□ 0.09
CACNB3-219ENST00000551544 NEURL1BA8MQ27 555 aa15.58■□□□□ 0.09
CACNB3-219ENST00000551544 EPHA10Q5JZY3 1008 aa15.58■□□□□ 0.09
CACNB3-219ENST00000551544 TPCN1Q9ULQ1 816 aa15.58■□□□□ 0.09
CACNB3-219ENST00000551544 R3HCC1Q9Y3T6 440 aaKnown RBP15.58■□□□□ 0.09
CACNB3-219ENST00000551544 SLIT3O75094 1523 aa15.58■□□□□ 0.08
CACNB3-219ENST00000551544 SLC27A2O14975 620 aa15.58■□□□□ 0.08
CACNB3-219ENST00000551544 SLC52A2Q9HAB3 445 aa15.58■□□□□ 0.08
CACNB3-219ENST00000551544 GCKRQ14397 625 aa15.58■□□□□ 0.08
CACNB3-219ENST00000551544 PROSER2Q86WR7 435 aaPredicted RBP15.58■□□□□ 0.08
CACNB3-219ENST00000551544 EDC3Q96F86 508 aaKnown RBP15.58■□□□□ 0.08
CACNB3-219ENST00000551544 HCLS1P14317 486 aaPredicted RBP15.57■□□□□ 0.08
CACNB3-219ENST00000551544 ZNF496Q96IT1 587 aaPredicted RBP15.57■□□□□ 0.08
CACNB3-219ENST00000551544 USP25Q9UHP3 1055 aa15.57■□□□□ 0.08
CACNB3-219ENST00000551544 NPHP3Q7Z494 1330 aa15.57■□□□□ 0.08
CACNB3-219ENST00000551544 PSMA5P28066 241 aa15.56■□□□□ 0.08
CACNB3-219ENST00000551544 TAF6LQ9Y6J9 622 aa15.56■□□□□ 0.08
CACNB3-219ENST00000551544 TATP17735 454 aaPredicted RBP15.56■□□□□ 0.08
CACNB3-219ENST00000551544 LARP1BQ659C4 914 aaKnown RBP15.56■□□□□ 0.08
CACNB3-219ENST00000551544 ZNF589Q86UQ0 364 aaPredicted RBP15.56■□□□□ 0.08
CACNB3-219ENST00000551544 FAM184AQ8NB25 1140 aa15.56■□□□□ 0.08
CACNB3-219ENST00000551544 METTL22Q9BUU2 404 aaPredicted RBP15.56■□□□□ 0.08
CACNB3-219ENST00000551544 NPHP4O75161 1426 aaPredicted RBP15.56■□□□□ 0.08
CACNB3-219ENST00000551544 LETM1O95202 739 aaPredicted RBP15.55■□□□□ 0.08
CACNB3-219ENST00000551544 MCM5P33992 734 aa15.55■□□□□ 0.08
CACNB3-219ENST00000551544 RNF20Q5VTR2 975 aa15.55■□□□□ 0.08
CACNB3-219ENST00000551544 GIMAP6Q6P9H5 292 aa15.55■□□□□ 0.08
CACNB3-219ENST00000551544 BLOC1S2Q6QNY1 142 aa15.55■□□□□ 0.08
CACNB3-219ENST00000551544 FERMT3Q86UX7 667 aa15.55■□□□□ 0.08
CACNB3-219ENST00000551544 MAP7D2Q96T17 732 aa15.55■□□□□ 0.08
CACNB3-219ENST00000551544 USP16Q9Y5T5 823 aa15.55■□□□□ 0.08
CACNB3-219ENST00000551544 CSB-PGBD3P0DP91 1061 aa15.55■□□□□ 0.08
CACNB3-219ENST00000551544 PHKG2P15735 406 aa15.55■□□□□ 0.08
CACNB3-219ENST00000551544 CSPP1Q1MSJ5 1256 aa15.55■□□□□ 0.08
CACNB3-219ENST00000551544 ANKRD13DQ6ZTN6 518 aa15.55■□□□□ 0.08
CACNB3-219ENST00000551544 NDUFB9Q9Y6M9 179 aa15.55■□□□□ 0.08
CACNB3-219ENST00000551544 DDX17Q92841 729 aaKnown RBP15.54■□□□□ 0.08
CACNB3-219ENST00000551544 KDM6AO15550 1401 aaPredicted RBP15.54■□□□□ 0.08
CACNB3-219ENST00000551544 PLCB2Q00722 1185 aa15.53■□□□□ 0.08
CACNB3-219ENST00000551544 STK3Q13188 491 aa15.53■□□□□ 0.08
CACNB3-219ENST00000551544 UVSSAQ2YD98 709 aa15.53■□□□□ 0.08
CACNB3-219ENST00000551544 FAM173BQ6P4H8 233 aa15.53■□□□□ 0.08
CACNB3-219ENST00000551544 UBE3BQ7Z3V4 1068 aa15.53■□□□□ 0.08
CACNB3-219ENST00000551544 TTC5Q8N0Z6 440 aa15.53■□□□□ 0.08
CACNB3-219ENST00000551544 CHMP3Q9Y3E7 222 aa15.53■□□□□ 0.08
CACNB3-219ENST00000551544 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.53■□□□□ 0.08
CACNB3-219ENST00000551544 ATP5J2-PTCD1G3V325 749 aa15.53■□□□□ 0.08
CACNB3-219ENST00000551544 PTCD1O75127 700 aaKnown RBP15.53■□□□□ 0.08
CACNB3-219ENST00000551544 CDC37L1Q7L3B6 337 aa15.53■□□□□ 0.08
CACNB3-219ENST00000551544 CCDC9Q9Y3X0 531 aaKnown RBP15.53■□□□□ 0.08
CACNB3-219ENST00000551544 ADCY5O95622 1261 aa15.53■□□□□ 0.08
CACNB3-219ENST00000551544 RPS6KB1P23443 525 aa15.53■□□□□ 0.08
CACNB3-219ENST00000551544 TFCP2Q12800 502 aa15.53■□□□□ 0.08
CACNB3-219ENST00000551544 ZNF830Q96NB3 372 aaPredicted RBP15.53■□□□□ 0.08
CACNB3-219ENST00000551544 RGPD5Q99666 1765 aa15.53■□□□□ 0.08
CACNB3-219ENST00000551544 CABLES1Q8TDN4 633 aa15.52■□□□□ 0.08
CACNB3-219ENST00000551544 SNRKQ9NRH2 765 aa15.52■□□□□ 0.08
CACNB3-219ENST00000551544 DBNLQ9UJU6 430 aaKnown RBP15.52■□□□□ 0.08
CACNB3-219ENST00000551544 SIPA1L3O60292 1781 aaPredicted RBP15.52■□□□□ 0.07
CACNB3-219ENST00000551544 MED23Q9ULK4 1368 aa15.52■□□□□ 0.07
CACNB3-219ENST00000551544 SNRPA1P09661 255 aaKnown RBP15.52■□□□□ 0.07
CACNB3-219ENST00000551544 IFNL2Q8IZJ0 200 aa15.52■□□□□ 0.07
CACNB3-219ENST00000551544 DNAJC2Q99543 621 aaKnown RBP15.52■□□□□ 0.07
CACNB3-219ENST00000551544 CHGBP05060 677 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms