RNA–Protein interactions for RNA: ENST00000551269.1

PRPF40B-213, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 923 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-213ENST00000551269 SUPT16HQ9Y5B9 1047 aaKnown RBP14.81□□□□□ -0.04
PRPF40B-213ENST00000551269 FAM177BA6PVY3 158 aa14.8□□□□□ -0.04
PRPF40B-213ENST00000551269 NEURL1BA8MQ27 555 aa14.8□□□□□ -0.04
PRPF40B-213ENST00000551269 ALDH1L1O75891 902 aa14.8□□□□□ -0.04
PRPF40B-213ENST00000551269 GTF2E1P29083 439 aaPredicted RBP14.8□□□□□ -0.04
PRPF40B-213ENST00000551269 CWF19L2Q2TBE0 894 aaKnown RBP14.8□□□□□ -0.04
PRPF40B-213ENST00000551269 BEND3Q5T5X7 828 aa14.8□□□□□ -0.04
PRPF40B-213ENST00000551269 NBPF5PQ86XG9 351 aaPredicted RBP14.8□□□□□ -0.04
PRPF40B-213ENST00000551269 ITPRIPQ8IWB1 547 aa14.8□□□□□ -0.04
PRPF40B-213ENST00000551269 ZNF34Q8IZ26 560 aa14.8□□□□□ -0.04
PRPF40B-213ENST00000551269 CCDC191Q8NCU4 936 aa14.8□□□□□ -0.04
PRPF40B-213ENST00000551269 ISCA1Q9BUE6 129 aa14.8□□□□□ -0.04
PRPF40B-213ENST00000551269 TNNQ9UQP3 1299 aa14.8□□□□□ -0.04
PRPF40B-213ENST00000551269 RNF123Q5XPI4 1314 aa14.8□□□□□ -0.04
PRPF40B-213ENST00000551269 IGKV5-2P06315 115 aa14.79□□□□□ -0.04
PRPF40B-213ENST00000551269 ST5P78524 1137 aa14.79□□□□□ -0.04
PRPF40B-213ENST00000551269 NLRP10Q86W26 655 aa14.79□□□□□ -0.04
PRPF40B-213ENST00000551269 CNBD1Q8NA66 436 aa14.79□□□□□ -0.04
PRPF40B-213ENST00000551269 ATF5Q9Y2D1 282 aaPredicted RBP14.79□□□□□ -0.04
PRPF40B-213ENST00000551269 BRCA1P38398 1863 aaKnown RBP14.78□□□□□ -0.04
PRPF40B-213ENST00000551269 POLRMTO00411 1230 aaKnown RBP14.78□□□□□ -0.04
PRPF40B-213ENST00000551269 SERPINB2P05120 415 aa14.78□□□□□ -0.04
PRPF40B-213ENST00000551269 DDR1Q08345 913 aa14.78□□□□□ -0.04
PRPF40B-213ENST00000551269 PDE3AQ14432 1141 aa14.78□□□□□ -0.04
PRPF40B-213ENST00000551269 TMEM57Q8N5G2 664 aa14.78□□□□□ -0.04
PRPF40B-213ENST00000551269 UTP14AQ9BVJ6 771 aaKnown RBP14.78□□□□□ -0.04
PRPF40B-213ENST00000551269 SPON1Q9HCB6 807 aa14.78□□□□□ -0.04
PRPF40B-213ENST00000551269 C9orf78Q9NZ63 289 aaPredicted RBP14.78□□□□□ -0.04
PRPF40B-213ENST00000551269 KIAA1551Q9HCM1 1747 aa14.78□□□□□ -0.04
PRPF40B-213ENST00000551269 SH3TC1Q8TE82 1336 aa14.77□□□□□ -0.04
PRPF40B-213ENST00000551269 NTSR2O95665 410 aa14.77□□□□□ -0.05
PRPF40B-213ENST00000551269 TRIM28Q13263 835 aaKnown RBP14.77□□□□□ -0.05
PRPF40B-213ENST00000551269 GCKRQ14397 625 aa14.77□□□□□ -0.05
PRPF40B-213ENST00000551269 INTS3Q68E01 1043 aaKnown RBP14.77□□□□□ -0.05
PRPF40B-213ENST00000551269 PANK1Q8TE04 598 aa14.77□□□□□ -0.05
PRPF40B-213ENST00000551269 TRMT112Q9UI30 125 aaKnown RBP14.77□□□□□ -0.05
PRPF40B-213ENST00000551269 RIC1Q4ADV7 1423 aa14.76□□□□□ -0.05
PRPF40B-213ENST00000551269 C10orf71Q711Q0 1435 aa14.76□□□□□ -0.05
PRPF40B-213ENST00000551269 ABCC12Q96J65 1359 aa14.76□□□□□ -0.05
PRPF40B-213ENST00000551269 GRM8O00222 908 aa14.76□□□□□ -0.05
PRPF40B-213ENST00000551269 RLBP1P12271 317 aa14.76□□□□□ -0.05
PRPF40B-213ENST00000551269 TM4SF1P30408 202 aa14.76□□□□□ -0.05
PRPF40B-213ENST00000551269 MVPQ14764 893 aaKnown RBP14.76□□□□□ -0.05
PRPF40B-213ENST00000551269 SUSD4Q5VX71 490 aa14.76□□□□□ -0.05
PRPF40B-213ENST00000551269 TPTE2Q6XPS3 522 aa14.76□□□□□ -0.05
PRPF40B-213ENST00000551269 TAF1P21675 1872 aa14.76□□□□□ -0.05
PRPF40B-213ENST00000551269 PCCAP05165 728 aaPredicted RBP14.75□□□□□ -0.05
PRPF40B-213ENST00000551269 HSP90B1P14625 803 aaKnown RBP14.75□□□□□ -0.05
PRPF40B-213ENST00000551269 RTL5Q5HYW3 569 aaPredicted RBP14.75□□□□□ -0.05
PRPF40B-213ENST00000551269 UBE3BQ7Z3V4 1068 aa14.75□□□□□ -0.05
PRPF40B-213ENST00000551269 ZBTB38Q8NAP3 1195 aaPredicted RBP14.75□□□□□ -0.05
PRPF40B-213ENST00000551269 CHMP4BQ9H444 224 aaKnown RBP14.75□□□□□ -0.05
PRPF40B-213ENST00000551269 DDX19BQ9UMR2 479 aa14.75□□□□□ -0.05
PRPF40B-213ENST00000551269 COG6Q9Y2V7 657 aa14.75□□□□□ -0.05
PRPF40B-213ENST00000551269 NEFLP07196 543 aa14.74□□□□□ -0.05
PRPF40B-213ENST00000551269 UBTFL1P0CB47 393 aaPredicted RBP14.74□□□□□ -0.05
PRPF40B-213ENST00000551269 C20orf194Q5TEA3 1177 aa14.74□□□□□ -0.05
PRPF40B-213ENST00000551269 PRR5LQ6MZQ0 368 aa14.74□□□□□ -0.05
PRPF40B-213ENST00000551269 NUTM1Q86Y26 1132 aa14.74□□□□□ -0.05
PRPF40B-213ENST00000551269 A0A1B0GUL6 1792 aa14.74□□□□□ -0.05
PRPF40B-213ENST00000551269 CDHR2Q9BYE9 1310 aa14.73□□□□□ -0.05
PRPF40B-213ENST00000551269 GNAI3P08754 354 aa14.73□□□□□ -0.05
PRPF40B-213ENST00000551269 KLHL34Q8N239 644 aa14.73□□□□□ -0.05
PRPF40B-213ENST00000551269 FAM89AQ96GI7 184 aa14.73□□□□□ -0.05
PRPF40B-213ENST00000551269 PPP1R1BQ9UD71 204 aaPredicted RBP14.73□□□□□ -0.05
PRPF40B-213ENST00000551269 HDAC5Q9UQL6 1122 aa14.73□□□□□ -0.05
PRPF40B-213ENST00000551269 ARFGEF1Q9Y6D6 1849 aa14.72□□□□□ -0.05
PRPF40B-213ENST00000551269 IRS4O14654 1257 aaPredicted RBP14.72□□□□□ -0.05
PRPF40B-213ENST00000551269 ERFEQ4G0M1 354 aa14.72□□□□□ -0.05
PRPF40B-213ENST00000551269 PTGER2P43116 358 aa14.71□□□□□ -0.05
PRPF40B-213ENST00000551269 CCDC24Q8N4L8 307 aa14.71□□□□□ -0.05
PRPF40B-213ENST00000551269 MEIS3Q99687 375 aa14.71□□□□□ -0.05
PRPF40B-213ENST00000551269 UTYO14607 1347 aa14.7□□□□□ -0.06
PRPF40B-213ENST00000551269 H7C1W4 665 aa14.7□□□□□ -0.06
PRPF40B-213ENST00000551269 PDE8AO60658 829 aa14.7□□□□□ -0.06
PRPF40B-213ENST00000551269 JARID2Q92833 1246 aaPredicted RBP14.7□□□□□ -0.06
PRPF40B-213ENST00000551269 CRBNQ96SW2 442 aa14.7□□□□□ -0.06
PRPF40B-213ENST00000551269 SGIP1Q9BQI5 828 aa14.7□□□□□ -0.06
PRPF40B-213ENST00000551269 LRRC37AA6NMS7 1700 aa14.69□□□□□ -0.06
PRPF40B-213ENST00000551269 NBPF7P0C2Y1 421 aaPredicted RBP14.69□□□□□ -0.06
PRPF40B-213ENST00000551269 HCLS1P14317 486 aaPredicted RBP14.69□□□□□ -0.06
PRPF40B-213ENST00000551269 PDE6BP35913 854 aa14.69□□□□□ -0.06
PRPF40B-213ENST00000551269 IRX6P78412 446 aaPredicted RBP14.69□□□□□ -0.06
PRPF40B-213ENST00000551269 NLRP3Q96P20 1036 aa14.69□□□□□ -0.06
PRPF40B-213ENST00000551269 USP44Q9H0E7 712 aa14.69□□□□□ -0.06
PRPF40B-213ENST00000551269 GNAI2P04899 355 aa14.68□□□□□ -0.06
PRPF40B-213ENST00000551269 CASP7P55210 303 aa14.68□□□□□ -0.06
PRPF40B-213ENST00000551269 CTSWP56202 376 aa14.68□□□□□ -0.06
PRPF40B-213ENST00000551269 RPGRQ92834 1020 aaKnown RBP14.68□□□□□ -0.06
PRPF40B-213ENST00000551269 SUCLG2Q96I99 432 aa14.68□□□□□ -0.06
PRPF40B-213ENST00000551269 BRIP1Q9BX63 1249 aa14.68□□□□□ -0.06
PRPF40B-213ENST00000551269 CHMP3Q9Y3E7 222 aa14.68□□□□□ -0.06
PRPF40B-213ENST00000551269 LRRFIP2Q9Y608 721 aaKnown RBP14.68□□□□□ -0.06
PRPF40B-213ENST00000551269 CCDC152Q4G0S7 254 aa14.67□□□□□ -0.06
PRPF40B-213ENST00000551269 SYNE4Q8N205 404 aa14.67□□□□□ -0.06
PRPF40B-213ENST00000551269 PLA2G12BQ9BX93 195 aa14.67□□□□□ -0.06
PRPF40B-213ENST00000551269 PDZRN3Q9UPQ7 1066 aa14.67□□□□□ -0.06
PRPF40B-213ENST00000551269 SLX4Q8IY92 1834 aa14.66□□□□□ -0.06
PRPF40B-213ENST00000551269 ZBTB7BO15156 539 aaPredicted RBP14.66□□□□□ -0.06
PRPF40B-213ENST00000551269 SLC10A5Q5PT55 438 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms