RNA–Protein interactions for RNA: ENST00000550889.5

ATXN2-222, Transcript of ataxin 2, humanhuman

TSL 2

Gene ATXN2, Length 1,703 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-222ENST00000550889 PCDHB9Q9Y5E1 797 aa6.53□□□□□ -1.36
ATXN2-222ENST00000550889 BRD4O60885 1362 aaPredicted RBP6.52□□□□□ -1.36
ATXN2-222ENST00000550889 COL16A1Q07092 1604 aaPredicted RBP6.52□□□□□ -1.37
ATXN2-222ENST00000550889 SPATA31A3Q5VYP0 1347 aa6.52□□□□□ -1.37
ATXN2-222ENST00000550889 AVPP01185 164 aa6.52□□□□□ -1.37
ATXN2-222ENST00000550889 GRM5P41594 1212 aa6.52□□□□□ -1.37
ATXN2-222ENST00000550889 NR1H3Q13133 447 aa6.52□□□□□ -1.37
ATXN2-222ENST00000550889 NHSL1Q5SYE7 1610 aa6.52□□□□□ -1.37
ATXN2-222ENST00000550889 USP32Q8NFA0 1604 aa6.52□□□□□ -1.37
ATXN2-222ENST00000550889 NINLQ9Y2I6 1382 aa6.52□□□□□ -1.37
ATXN2-222ENST00000550889 KIF1AQ12756 1690 aa6.52□□□□□ -1.37
ATXN2-222ENST00000550889 ACEP12821 1306 aa6.51□□□□□ -1.37
ATXN2-222ENST00000550889 PPIP5K1Q6PFW1 1433 aa6.51□□□□□ -1.37
ATXN2-222ENST00000550889 AXIN1O15169 862 aa6.51□□□□□ -1.37
ATXN2-222ENST00000550889 NR3C2P08235 984 aa6.51□□□□□ -1.37
ATXN2-222ENST00000550889 POM121Q96HA1 1249 aa6.51□□□□□ -1.37
ATXN2-222ENST00000550889 COG6Q9Y2V7 657 aa6.51□□□□□ -1.37
ATXN2-222ENST00000550889 MAP4K5Q9Y4K4 846 aa6.51□□□□□ -1.37
ATXN2-222ENST00000550889 PNPLA6Q8IY17 1366 aa6.51□□□□□ -1.37
ATXN2-222ENST00000550889 QRICH2Q9H0J4 1663 aa6.51□□□□□ -1.37
ATXN2-222ENST00000550889 RAD21O60216 631 aa6.5□□□□□ -1.37
ATXN2-222ENST00000550889 RAB15P59190 212 aa6.5□□□□□ -1.37
ATXN2-222ENST00000550889 XPCQ01831 940 aaPredicted RBP6.5□□□□□ -1.37
ATXN2-222ENST00000550889 NR5A1Q13285 461 aa6.5□□□□□ -1.37
ATXN2-222ENST00000550889 KCTD15Q96SI1 283 aaPredicted RBP6.5□□□□□ -1.37
ATXN2-222ENST00000550889 AAASQ9NRG9 546 aa6.5□□□□□ -1.37
ATXN2-222ENST00000550889 CDV3Q9UKY7 258 aaKnown RBP6.5□□□□□ -1.37
ATXN2-222ENST00000550889 ARHGEF10O15013 1369 aa6.5□□□□□ -1.37
ATXN2-222ENST00000550889 PHLPP1O60346 1717 aa6.5□□□□□ -1.37
ATXN2-222ENST00000550889 CPSF1Q10570 1443 aaKnown RBP6.5□□□□□ -1.37
ATXN2-222ENST00000550889 TNS3Q68CZ2 1445 aa6.5□□□□□ -1.37
ATXN2-222ENST00000550889 HSPA5P11021 654 aaKnown RBP6.5□□□□□ -1.37
ATXN2-222ENST00000550889 IRF5Q13568 498 aa6.5□□□□□ -1.37
ATXN2-222ENST00000550889 NBPF20Q3BBV1 942 aa6.5□□□□□ -1.37
ATXN2-222ENST00000550889 ZNF330Q9Y3S2 320 aaPredicted RBP6.5□□□□□ -1.37
ATXN2-222ENST00000550889 WDR4P57081 412 aaKnown RBP6.49□□□□□ -1.37
ATXN2-222ENST00000550889 VAC14Q08AM6 782 aa6.49□□□□□ -1.37
ATXN2-222ENST00000550889 CTC1Q2NKJ3 1217 aa6.49□□□□□ -1.37
ATXN2-222ENST00000550889 SLC12A5Q9H2X9 1139 aa6.49□□□□□ -1.37
ATXN2-222ENST00000550889 TERF2IPQ9NYB0 399 aa6.49□□□□□ -1.37
ATXN2-222ENST00000550889 USP6P35125 1406 aa6.49□□□□□ -1.37
ATXN2-222ENST00000550889 SSH2Q76I76 1423 aa6.49□□□□□ -1.37
ATXN2-222ENST00000550889 CAPN5O15484 640 aaPredicted RBP6.48□□□□□ -1.37
ATXN2-222ENST00000550889 ZEB1P37275 1124 aaPredicted RBP6.48□□□□□ -1.37
ATXN2-222ENST00000550889 CCDC116Q8IYX3 515 aa6.48□□□□□ -1.37
ATXN2-222ENST00000550889 DACH1Q9UI36 760 aa6.48□□□□□ -1.37
ATXN2-222ENST00000550889 TOPAZ1Q8N9V7 1692 aa6.48□□□□□ -1.37
ATXN2-222ENST00000550889 SHPRHQ149N8 1683 aa6.48□□□□□ -1.37
ATXN2-222ENST00000550889 ZIC2O95409 532 aaPredicted RBP6.47□□□□□ -1.37
ATXN2-222ENST00000550889 INTS6LQ5JSJ4 861 aaKnown RBP6.47□□□□□ -1.37
ATXN2-222ENST00000550889 HDGFL2Q7Z4V5 671 aaPredicted RBP6.47□□□□□ -1.37
ATXN2-222ENST00000550889 CRIPAKQ8N1N5 446 aa6.47□□□□□ -1.37
ATXN2-222ENST00000550889 ABTB2Q8N961 1025 aa6.47□□□□□ -1.37
ATXN2-222ENST00000550889 TMC1Q8TDI8 760 aa6.47□□□□□ -1.37
ATXN2-222ENST00000550889 ITPKCQ96DU7 683 aa6.47□□□□□ -1.37
ATXN2-222ENST00000550889 ITSN1Q15811 1721 aa6.47□□□□□ -1.37
ATXN2-222ENST00000550889 TTC21AQ8NDW8 1320 aa6.47□□□□□ -1.37
ATXN2-222ENST00000550889 KTN1Q86UP2 1357 aaKnown RBP6.47□□□□□ -1.37
ATXN2-222ENST00000550889 TIMP2P16035 220 aa6.47□□□□□ -1.37
ATXN2-222ENST00000550889 SMCPP49901 116 aaPredicted RBP6.47□□□□□ -1.37
ATXN2-222ENST00000550889 NLRP13Q86W25 1043 aa6.47□□□□□ -1.37
ATXN2-222ENST00000550889 CLUAP1Q96AJ1 413 aa6.47□□□□□ -1.37
ATXN2-222ENST00000550889 ZFAND3Q9H8U3 227 aa6.47□□□□□ -1.37
ATXN2-222ENST00000550889 CD163L1Q9NR16 1453 aa6.47□□□□□ -1.37
ATXN2-222ENST00000550889 TTC21BQ7Z4L5 1316 aa6.47□□□□□ -1.37
ATXN2-222ENST00000550889 ANKRD36BQ8N2N9 1353 aa6.46□□□□□ -1.37
ATXN2-222ENST00000550889 RGPD8O14715 1765 aaPredicted RBP6.46□□□□□ -1.38
ATXN2-222ENST00000550889 LRP6O75581 1613 aa6.46□□□□□ -1.38
ATXN2-222ENST00000550889 COL22A1Q8NFW1 1626 aaPredicted RBP6.46□□□□□ -1.38
ATXN2-222ENST00000550889 WASHC4Q2M389 1173 aa6.46□□□□□ -1.38
ATXN2-222ENST00000550889 PPP1R26Q5T8A7 1209 aaPredicted RBP6.46□□□□□ -1.38
ATXN2-222ENST00000550889 FNBP4Q8N3X1 1017 aaPredicted RBP6.46□□□□□ -1.38
ATXN2-222ENST00000550889 USP19O94966 1318 aa6.46□□□□□ -1.38
ATXN2-222ENST00000550889 A0A1W2PP64 1363 aa6.46□□□□□ -1.38
ATXN2-222ENST00000550889 MED1Q15648 1581 aaPredicted RBP6.46□□□□□ -1.38
ATXN2-222ENST00000550889 EDC4Q6P2E9 1401 aaKnown RBP6.45□□□□□ -1.38
ATXN2-222ENST00000550889 GIGYF1O75420 1035 aaPredicted RBP6.45□□□□□ -1.38
ATXN2-222ENST00000550889 BMP1P13497 986 aa6.45□□□□□ -1.38
ATXN2-222ENST00000550889 MEX3CQ5U5Q3 659 aaKnown RBP6.45□□□□□ -1.38
ATXN2-222ENST00000550889 ZNF772Q68DY9 489 aaPredicted RBP6.45□□□□□ -1.38
ATXN2-222ENST00000550889 WWC1Q8IX03 1113 aa6.45□□□□□ -1.38
ATXN2-222ENST00000550889 ZNF592Q92610 1267 aa6.45□□□□□ -1.38
ATXN2-222ENST00000550889 KLF16Q9BXK1 252 aaPredicted RBP6.45□□□□□ -1.38
ATXN2-222ENST00000550889 RGS17Q9UGC6 210 aaPredicted RBP6.45□□□□□ -1.38
ATXN2-222ENST00000550889 EMILIN1Q9Y6C2 1016 aa6.45□□□□□ -1.38
ATXN2-222ENST00000550889 USP31Q70CQ4 1352 aa6.45□□□□□ -1.38
ATXN2-222ENST00000550889 TRPM3Q9HCF6 1732 aaPredicted RBP6.45□□□□□ -1.38
ATXN2-222ENST00000550889 C11orf95C9JLR9 678 aaPredicted RBP6.45□□□□□ -1.38
ATXN2-222ENST00000550889 ADAMTS2O95450 1211 aa6.45□□□□□ -1.38
ATXN2-222ENST00000550889 GCP02774 474 aa6.45□□□□□ -1.38
ATXN2-222ENST00000550889 MCCD1P59942 119 aaPredicted RBP6.45□□□□□ -1.38
ATXN2-222ENST00000550889 DHX9Q08211 1270 aaKnown RBP6.45□□□□□ -1.38
ATXN2-222ENST00000550889 NGLY1Q96IV0 654 aa6.45□□□□□ -1.38
ATXN2-222ENST00000550889 PGPEP1Q9NXJ5 209 aa6.45□□□□□ -1.38
ATXN2-222ENST00000550889 ESPNB1AK53 854 aa6.44□□□□□ -1.38
ATXN2-222ENST00000550889 ERVH48-1M5A8F1 160 aa6.44□□□□□ -1.38
ATXN2-222ENST00000550889 KCNH5Q8NCM2 988 aa6.44□□□□□ -1.38
ATXN2-222ENST00000550889 C8orf37Q96NL8 207 aa6.44□□□□□ -1.38
ATXN2-222ENST00000550889 ATP13A2Q9NQ11 1180 aa6.44□□□□□ -1.38
ATXN2-222ENST00000550889 TMPRSS4Q9NRS4 437 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms