RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 OSBPL3Q9H4L5 887 aa15.53■□□□□ 0.08
CACNB3-217ENST00000550483 ZBTB3Q9H5J0 574 aa15.53■□□□□ 0.08
CACNB3-217ENST00000550483 ZBTB1Q9Y2K1 713 aa15.53■□□□□ 0.08
CACNB3-217ENST00000550483 HSP90B1P14625 803 aaKnown RBP15.52■□□□□ 0.08
CACNB3-217ENST00000550483 CRKLP46109 303 aaKnown RBP15.52■□□□□ 0.08
CACNB3-217ENST00000550483 C1QTNF8P60827 252 aa15.52■□□□□ 0.08
CACNB3-217ENST00000550483 RC3H1Q5TC82 1133 aaKnown RBP15.52■□□□□ 0.08
CACNB3-217ENST00000550483 SKAP1Q86WV1 359 aa15.52■□□□□ 0.08
CACNB3-217ENST00000550483 AFDNP55196 1824 aaKnown RBP15.52■□□□□ 0.07
CACNB3-217ENST00000550483 SURF6O75683 361 aaKnown RBP15.51■□□□□ 0.07
CACNB3-217ENST00000550483 DZIP3Q86Y13 1208 aaKnown RBP15.51■□□□□ 0.07
CACNB3-217ENST00000550483 BCL11BQ9C0K0 894 aaPredicted RBP15.51■□□□□ 0.07
CACNB3-217ENST00000550483 UPF2Q9HAU5 1272 aaKnown RBP15.51■□□□□ 0.07
CACNB3-217ENST00000550483 ZNF652Q9Y2D9 606 aa15.51■□□□□ 0.07
CACNB3-217ENST00000550483 CDHR2Q9BYE9 1310 aa15.5■□□□□ 0.07
CACNB3-217ENST00000550483 ATP5J2-PTCD1G3V325 749 aa15.5■□□□□ 0.07
CACNB3-217ENST00000550483 PCCAP05165 728 aaPredicted RBP15.5■□□□□ 0.07
CACNB3-217ENST00000550483 PTGER2P43116 358 aa15.5■□□□□ 0.07
CACNB3-217ENST00000550483 CASP7P55210 303 aa15.5■□□□□ 0.07
CACNB3-217ENST00000550483 INTS5Q6P9B9 1019 aaKnown RBP15.5■□□□□ 0.07
CACNB3-217ENST00000550483 UBE3BQ7Z3V4 1068 aa15.5■□□□□ 0.07
CACNB3-217ENST00000550483 PLEKHM2Q8IWE5 1019 aa15.5■□□□□ 0.07
CACNB3-217ENST00000550483 PROM2Q8N271 834 aa15.5■□□□□ 0.07
CACNB3-217ENST00000550483 PLA2G12BQ9BX93 195 aa15.5■□□□□ 0.07
CACNB3-217ENST00000550483 BICC1Q9H694 974 aaKnown RBP15.5■□□□□ 0.07
CACNB3-217ENST00000550483 EXOC6BQ9Y2D4 811 aa15.5■□□□□ 0.07
CACNB3-217ENST00000550483 ZNF330Q9Y3S2 320 aaPredicted RBP15.5■□□□□ 0.07
CACNB3-217ENST00000550483 COL5A3P25940 1745 aaPredicted RBP15.5■□□□□ 0.07
CACNB3-217ENST00000550483 ANP32AP39687 249 aaKnown RBP15.49■□□□□ 0.07
CACNB3-217ENST00000550483 PARP10Q53GL7 1025 aa15.49■□□□□ 0.07
CACNB3-217ENST00000550483 ZBTB38Q8NAP3 1195 aaPredicted RBP15.49■□□□□ 0.07
CACNB3-217ENST00000550483 RHPN1Q8TCX5 695 aa15.49■□□□□ 0.07
CACNB3-217ENST00000550483 KAZALD1Q96I82 304 aa15.49■□□□□ 0.07
CACNB3-217ENST00000550483 AK7Q96M32 723 aa15.49■□□□□ 0.07
CACNB3-217ENST00000550483 COPRSQ9NQ92 184 aa15.49■□□□□ 0.07
CACNB3-217ENST00000550483 FBXO3Q9UK99 471 aa15.49■□□□□ 0.07
CACNB3-217ENST00000550483 BTAF1O14981 1849 aa15.48■□□□□ 0.07
CACNB3-217ENST00000550483 G3BP1Q13283 466 aaKnown RBP eCLIP15.48■□□□□ 0.07
CACNB3-217ENST00000550483 OS9Q13438 667 aaPredicted RBP15.48■□□□□ 0.07
CACNB3-217ENST00000550483 ITPK1Q13572 414 aa15.48■□□□□ 0.07
CACNB3-217ENST00000550483 CLEC4GQ6UXB4 293 aa15.48■□□□□ 0.07
CACNB3-217ENST00000550483 SYT17Q9BSW7 474 aa15.48■□□□□ 0.07
CACNB3-217ENST00000550483 TTC22Q5TAA0 569 aa15.47■□□□□ 0.07
CACNB3-217ENST00000550483 CLASRPQ8N2M8 674 aaKnown RBP15.47■□□□□ 0.07
CACNB3-217ENST00000550483 GPATCH3Q96I76 525 aa15.47■□□□□ 0.07
CACNB3-217ENST00000550483 FHDC1Q9C0D6 1143 aaPredicted RBP15.47■□□□□ 0.07
CACNB3-217ENST00000550483 STAP2Q9UGK3 403 aa15.47■□□□□ 0.07
CACNB3-217ENST00000550483 ANKRD36CQ5JPF3 1778 aa15.47■□□□□ 0.07
CACNB3-217ENST00000550483 PLSCR1O15162 318 aa15.46■□□□□ 0.07
CACNB3-217ENST00000550483 MX1P20591 662 aa15.46■□□□□ 0.07
CACNB3-217ENST00000550483 SLC27A3Q5K4L6 730 aa15.46■□□□□ 0.07
CACNB3-217ENST00000550483 CASC1Q6TDU7 716 aa15.46■□□□□ 0.07
CACNB3-217ENST00000550483 CCNL1Q9UK58 526 aaPredicted RBP15.46■□□□□ 0.07
CACNB3-217ENST00000550483 LY75O60449 1722 aa15.46■□□□□ 0.06
CACNB3-217ENST00000550483 TTC41PQ6P2S7 1318 aa15.45■□□□□ 0.06
CACNB3-217ENST00000550483 SALL3Q9BXA9 1300 aa15.45■□□□□ 0.06
CACNB3-217ENST00000550483 PDE1AP54750 535 aa15.45■□□□□ 0.06
CACNB3-217ENST00000550483 NLRP10Q86W26 655 aa15.45■□□□□ 0.06
CACNB3-217ENST00000550483 ZNF34Q8IZ26 560 aa15.45■□□□□ 0.06
CACNB3-217ENST00000550483 ARXQ96QS3 562 aa15.45■□□□□ 0.06
CACNB3-217ENST00000550483 USP42Q9H9J4 1324 aaKnown RBP15.44■□□□□ 0.06
CACNB3-217ENST00000550483 KAT6BQ8WYB5 2073 aa15.44■□□□□ 0.06
CACNB3-217ENST00000550483 GOLGB1Q14789 3259 aaKnown RBP15.44■□□□□ 0.06
CACNB3-217ENST00000550483 APBB1O00213 710 aa15.44■□□□□ 0.06
CACNB3-217ENST00000550483 ERC2O15083 957 aa15.44■□□□□ 0.06
CACNB3-217ENST00000550483 CDC45O75419 566 aa15.44■□□□□ 0.06
CACNB3-217ENST00000550483 RPS6KA4O75676 772 aa15.44■□□□□ 0.06
CACNB3-217ENST00000550483 CAMTA2O94983 1202 aa15.44■□□□□ 0.06
CACNB3-217ENST00000550483 SBF2Q86WG5 1849 aa15.44■□□□□ 0.06
CACNB3-217ENST00000550483 SMARCA5O60264 1052 aaPredicted RBP15.43■□□□□ 0.06
CACNB3-217ENST00000550483 CIAO1O76071 339 aa15.43■□□□□ 0.06
CACNB3-217ENST00000550483 ADRA2BP18089 450 aa15.43■□□□□ 0.06
CACNB3-217ENST00000550483 FOXO4P98177 505 aa15.43■□□□□ 0.06
CACNB3-217ENST00000550483 LINC00116Q8NCU8 138 aa15.43■□□□□ 0.06
CACNB3-217ENST00000550483 DDRGK1Q96HY6 314 aa15.43■□□□□ 0.06
CACNB3-217ENST00000550483 RFX5P48382 616 aaPredicted RBP15.42■□□□□ 0.06
CACNB3-217ENST00000550483 HLFQ16534 295 aa15.42■□□□□ 0.06
CACNB3-217ENST00000550483 EPHA10Q5JZY3 1008 aa15.42■□□□□ 0.06
CACNB3-217ENST00000550483 LMBR1LQ6UX01 489 aa15.42■□□□□ 0.06
CACNB3-217ENST00000550483 TBC1D2BQ9UPU7 963 aa15.42■□□□□ 0.06
CACNB3-217ENST00000550483 SH3TC1Q8TE82 1336 aa15.42■□□□□ 0.06
CACNB3-217ENST00000550483 BCORQ6W2J9 1755 aa15.41■□□□□ 0.06
CACNB3-217ENST00000550483 CSF1RP07333 972 aa15.41■□□□□ 0.06
CACNB3-217ENST00000550483 IFIT2P09913 472 aaKnown RBP15.41■□□□□ 0.06
CACNB3-217ENST00000550483 PTPN12Q05209 780 aaKnown RBP15.41■□□□□ 0.06
CACNB3-217ENST00000550483 CCDC57Q2TAC2 916 aa15.41■□□□□ 0.06
CACNB3-217ENST00000550483 GPR108Q9NPR9 543 aa15.41■□□□□ 0.06
CACNB3-217ENST00000550483 TRMT112Q9UI30 125 aaKnown RBP15.41■□□□□ 0.06
CACNB3-217ENST00000550483 RTCBQ9Y3I0 505 aaKnown RBP15.41■□□□□ 0.06
CACNB3-217ENST00000550483 CASZ1Q86V15 1759 aa15.4■□□□□ 0.06
CACNB3-217ENST00000550483 PDE8AO60658 829 aa15.4■□□□□ 0.06
CACNB3-217ENST00000550483 GLRX3O76003 335 aaKnown RBP15.4■□□□□ 0.06
CACNB3-217ENST00000550483 IL15P40933 162 aaPredicted RBP15.4■□□□□ 0.06
CACNB3-217ENST00000550483 C16orf71Q8IYS4 520 aaPredicted RBP15.4■□□□□ 0.06
CACNB3-217ENST00000550483 UTP14AQ9BVJ6 771 aaKnown RBP15.4■□□□□ 0.06
CACNB3-217ENST00000550483 NARFQ9UHQ1 456 aa15.4■□□□□ 0.06
CACNB3-217ENST00000550483 SCN7AQ01118 1682 aa15.4■□□□□ 0.06
CACNB3-217ENST00000550483 NUP98P52948 1817 aa15.4■□□□□ 0.06
CACNB3-217ENST00000550483 GSPT1P15170 499 aaKnown RBP15.39■□□□□ 0.05
CACNB3-217ENST00000550483 SGIP1Q9BQI5 828 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms