RNA–Protein interactions for RNA: ENST00000550379.1

RNF41-208, Transcript of ring finger protein 41, humanhuman

TSL 3

Gene RNF41, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-208ENST00000550379 PIP4K2AP48426 406 aaPredicted RBP9.65□□□□□ -0.86
RNF41-208ENST00000550379 KCNQ4P56696 695 aa9.65□□□□□ -0.86
RNF41-208ENST00000550379 FKBP8Q14318 412 aa9.65□□□□□ -0.86
RNF41-208ENST00000550379 ZNF827Q17R98 1081 aa9.65□□□□□ -0.86
RNF41-208ENST00000550379 SLC4A10Q6U841 1118 aa9.65□□□□□ -0.86
RNF41-208ENST00000550379 PPP1R42Q7Z4L9 355 aa9.65□□□□□ -0.86
RNF41-208ENST00000550379 ANKRD44Q8N8A2 993 aa9.65□□□□□ -0.86
RNF41-208ENST00000550379 SSH3Q8TE77 659 aa9.65□□□□□ -0.86
RNF41-208ENST00000550379 MEIS3Q99687 375 aa9.65□□□□□ -0.86
RNF41-208ENST00000550379 MYD88Q99836 296 aa9.65□□□□□ -0.86
RNF41-208ENST00000550379 NYXQ9GZU5 481 aa9.65□□□□□ -0.86
RNF41-208ENST00000550379 ZBTB3Q9H5J0 574 aa9.65□□□□□ -0.86
RNF41-208ENST00000550379 FBXO3Q9UK99 471 aa9.65□□□□□ -0.86
RNF41-208ENST00000550379 UBN2Q6ZU65 1347 aa9.64□□□□□ -0.87
RNF41-208ENST00000550379 AFDNP55196 1824 aaKnown RBP9.64□□□□□ -0.87
RNF41-208ENST00000550379 KLRG2A4D1S0 409 aaPredicted RBP9.64□□□□□ -0.87
RNF41-208ENST00000550379 NBPF7P0C2Y1 421 aaPredicted RBP9.64□□□□□ -0.87
RNF41-208ENST00000550379 ATP8B2P98198 1209 aa9.64□□□□□ -0.87
RNF41-208ENST00000550379 POLA2Q14181 598 aa9.64□□□□□ -0.87
RNF41-208ENST00000550379 CWF19L2Q2TBE0 894 aaKnown RBP9.64□□□□□ -0.87
RNF41-208ENST00000550379 KAZALD1Q96I82 304 aa9.64□□□□□ -0.87
RNF41-208ENST00000550379 STK32BQ9NY57 414 aa9.64□□□□□ -0.87
RNF41-208ENST00000550379 C9orf78Q9NZ63 289 aaPredicted RBP9.64□□□□□ -0.87
RNF41-208ENST00000550379 TFCP2L1Q9NZI6 479 aa9.64□□□□□ -0.87
RNF41-208ENST00000550379 CARMIL3Q8ND23 1372 aa9.63□□□□□ -0.87
RNF41-208ENST00000550379 MYH3P11055 1940 aa9.63□□□□□ -0.87
RNF41-208ENST00000550379 NTSR2O95665 410 aa9.63□□□□□ -0.87
RNF41-208ENST00000550379 CEP85Q6P2H3 762 aa9.63□□□□□ -0.87
RNF41-208ENST00000550379 TPTE2Q6XPS3 522 aa9.63□□□□□ -0.87
RNF41-208ENST00000550379 DEFB132Q7Z7B7 95 aa9.63□□□□□ -0.87
RNF41-208ENST00000550379 COL23A1Q86Y22 540 aaPredicted RBP9.63□□□□□ -0.87
RNF41-208ENST00000550379 SMC5Q8IY18 1101 aa9.63□□□□□ -0.87
RNF41-208ENST00000550379 SETDB2Q96T68 719 aa9.63□□□□□ -0.87
RNF41-208ENST00000550379 UTP14AQ9BVJ6 771 aaKnown RBP9.63□□□□□ -0.87
RNF41-208ENST00000550379 ANO8Q9HCE9 1232 aaPredicted RBP9.63□□□□□ -0.87
RNF41-208ENST00000550379 PDZRN3Q9UPQ7 1066 aa9.63□□□□□ -0.87
RNF41-208ENST00000550379 NOP58Q9Y2X3 529 aaKnown RBP9.63□□□□□ -0.87
RNF41-208ENST00000550379 PCDHB15Q9Y5E8 787 aa9.63□□□□□ -0.87
RNF41-208ENST00000550379 LAMB2P55268 1798 aa9.63□□□□□ -0.87
RNF41-208ENST00000550379 KDM2BQ8NHM5 1336 aa9.62□□□□□ -0.87
RNF41-208ENST00000550379 SH3TC1Q8TE82 1336 aa9.62□□□□□ -0.87
RNF41-208ENST00000550379 HMMRO75330 724 aa9.62□□□□□ -0.87
RNF41-208ENST00000550379 FOXO4P98177 505 aa9.62□□□□□ -0.87
RNF41-208ENST00000550379 SF3B3Q15393 1217 aaKnown RBP9.62□□□□□ -0.87
RNF41-208ENST00000550379 USPL1Q5W0Q7 1092 aa9.62□□□□□ -0.87
RNF41-208ENST00000550379 SIRT2Q8IXJ6 389 aa9.62□□□□□ -0.87
RNF41-208ENST00000550379 GCC1Q96CN9 775 aa9.62□□□□□ -0.87
RNF41-208ENST00000550379 RWDD1Q9H446 243 aaPredicted RBP9.62□□□□□ -0.87
RNF41-208ENST00000550379 DCTPP1Q9H773 170 aa9.62□□□□□ -0.87
RNF41-208ENST00000550379 NIP7Q9Y221 180 aaKnown RBP eCLIP9.62□□□□□ -0.87
RNF41-208ENST00000550379 GTF3C3Q9Y5Q9 886 aa9.62□□□□□ -0.87
RNF41-208ENST00000550379 ATP5J2-PTCD1G3V325 749 aa9.61□□□□□ -0.87
RNF41-208ENST00000550379 ZBTB22O15209 634 aa9.61□□□□□ -0.87
RNF41-208ENST00000550379 PDE8AO60658 829 aa9.61□□□□□ -0.87
RNF41-208ENST00000550379 NFIXQ14938 502 aa9.61□□□□□ -0.87
RNF41-208ENST00000550379 SUSD4Q5VX71 490 aa9.61□□□□□ -0.87
RNF41-208ENST00000550379 TBC1D9BQ66K14 1250 aa9.61□□□□□ -0.87
RNF41-208ENST00000550379 CENPQQ7L2Z9 268 aaPredicted RBP9.61□□□□□ -0.87
RNF41-208ENST00000550379 COPRSQ9NQ92 184 aa9.61□□□□□ -0.87
RNF41-208ENST00000550379 POLRMTO00411 1230 aaKnown RBP9.6□□□□□ -0.87
RNF41-208ENST00000550379 CRY2Q49AN0 593 aa9.6□□□□□ -0.87
RNF41-208ENST00000550379 HSP90AB4PQ58FF6 505 aa9.6□□□□□ -0.87
RNF41-208ENST00000550379 UBE3BQ7Z3V4 1068 aa9.6□□□□□ -0.87
RNF41-208ENST00000550379 TRMT112Q9UI30 125 aaKnown RBP9.6□□□□□ -0.87
RNF41-208ENST00000550379 CASZ1Q86V15 1759 aa9.6□□□□□ -0.87
RNF41-208ENST00000550379 IRS4O14654 1257 aaPredicted RBP9.59□□□□□ -0.87
RNF41-208ENST00000550379 RFX5P48382 616 aaPredicted RBP9.59□□□□□ -0.87
RNF41-208ENST00000550379 TTLL11Q8NHH1 800 aa9.59□□□□□ -0.87
RNF41-208ENST00000550379 SUCLG2Q96I99 432 aa9.59□□□□□ -0.87
RNF41-208ENST00000550379 SRP68Q9UHB9 627 aaKnown RBP9.59□□□□□ -0.87
RNF41-208ENST00000550379 ZNF330Q9Y3S2 320 aaPredicted RBP9.59□□□□□ -0.87
RNF41-208ENST00000550379 LRRFIP2Q9Y608 721 aaKnown RBP9.59□□□□□ -0.87
RNF41-208ENST00000550379 DDX60Q8IY21 1712 aaKnown RBP9.59□□□□□ -0.87
RNF41-208ENST00000550379 RAB11FIP3O75154 756 aa9.58□□□□□ -0.88
RNF41-208ENST00000550379 CIAO1O76071 339 aa9.58□□□□□ -0.88
RNF41-208ENST00000550379 HOXA10P31260 410 aaPredicted RBP9.58□□□□□ -0.88
RNF41-208ENST00000550379 CTSWP56202 376 aa9.58□□□□□ -0.88
RNF41-208ENST00000550379 ILDR2Q71H61 639 aa9.58□□□□□ -0.88
RNF41-208ENST00000550379 CCDC136Q96JN2 1154 aa9.58□□□□□ -0.88
RNF41-208ENST00000550379 BRIP1Q9BX63 1249 aa9.58□□□□□ -0.88
RNF41-208ENST00000550379 BICC1Q9H694 974 aaKnown RBP9.58□□□□□ -0.88
RNF41-208ENST00000550379 KIF13BQ9NQT8 1826 aa9.57□□□□□ -0.88
RNF41-208ENST00000550379 SERPINB2P05120 415 aa9.57□□□□□ -0.88
RNF41-208ENST00000550379 GPTP24298 496 aa9.57□□□□□ -0.88
RNF41-208ENST00000550379 IRX6P78412 446 aaPredicted RBP9.57□□□□□ -0.88
RNF41-208ENST00000550379 EPHA10Q5JZY3 1008 aa9.57□□□□□ -0.88
RNF41-208ENST00000550379 PRR5LQ6MZQ0 368 aa9.57□□□□□ -0.88
RNF41-208ENST00000550379 NBPF5PQ86XG9 351 aaPredicted RBP9.57□□□□□ -0.88
RNF41-208ENST00000550379 FAM89AQ96GI7 184 aa9.57□□□□□ -0.88
RNF41-208ENST00000550379 SGIP1Q9BQI5 828 aa9.57□□□□□ -0.88
RNF41-208ENST00000550379 MTFR1LQ9H019 292 aa9.57□□□□□ -0.88
RNF41-208ENST00000550379 PNMA6EA0A0J9YXQ4 647 aa9.56□□□□□ -0.88
RNF41-208ENST00000550379 SRGAP3O43295 1099 aa9.56□□□□□ -0.88
RNF41-208ENST00000550379 PHF14O94880 888 aa9.56□□□□□ -0.88
RNF41-208ENST00000550379 IGHDP01880 384 aa9.56□□□□□ -0.88
RNF41-208ENST00000550379 PTPN12Q05209 780 aaKnown RBP9.56□□□□□ -0.88
RNF41-208ENST00000550379 DDR1Q08345 913 aa9.56□□□□□ -0.88
RNF41-208ENST00000550379 CCDC152Q4G0S7 254 aa9.56□□□□□ -0.88
RNF41-208ENST00000550379 LMBR1LQ6UX01 489 aa9.56□□□□□ -0.88
RNF41-208ENST00000550379 TMC4Q7Z404 712 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms