RNA–Protein interactions for RNA: ENST00000550339.1

NR4A1-214, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 2

Gene NR4A1, Length 500 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-214ENST00000550339 LINS1Q8NG48 757 aa15.12■□□□□ 0.01
NR4A1-214ENST00000550339 SRCIN1Q9C0H9 1055 aa15.12■□□□□ 0.01
NR4A1-214ENST00000550339 PARP3Q9Y6F1 533 aa15.12■□□□□ 0.01
NR4A1-214ENST00000550339 NEURL1BA8MQ27 555 aa15.11■□□□□ 0.01
NR4A1-214ENST00000550339 DDR1Q08345 913 aa15.11■□□□□ 0.01
NR4A1-214ENST00000550339 RTL5Q5HYW3 569 aaPredicted RBP15.11■□□□□ 0.01
NR4A1-214ENST00000550339 C20orf194Q5TEA3 1177 aa15.11■□□□□ 0.01
NR4A1-214ENST00000550339 SUSD4Q5VX71 490 aa15.11■□□□□ 0.01
NR4A1-214ENST00000550339 NBPF5PQ86XG9 351 aaPredicted RBP15.11■□□□□ 0.01
NR4A1-214ENST00000550339 TMEM57Q8N5G2 664 aa15.11■□□□□ 0.01
NR4A1-214ENST00000550339 JARID2Q92833 1246 aaPredicted RBP15.11■□□□□ 0.01
NR4A1-214ENST00000550339 CWC25Q9NXE8 425 aaPredicted RBP15.11■□□□□ 0.01
NR4A1-214ENST00000550339 ABCC4O15439 1325 aa15.11■□□□□ 0.01
NR4A1-214ENST00000550339 POLRMTO00411 1230 aaKnown RBP15.1■□□□□ 0.01
NR4A1-214ENST00000550339 SERPINB2P05120 415 aa15.1■□□□□ 0.01
NR4A1-214ENST00000550339 MS4A1P11836 297 aa15.1■□□□□ 0.01
NR4A1-214ENST00000550339 POLD1P28340 1107 aa15.1■□□□□ 0.01
NR4A1-214ENST00000550339 CCT4P50991 539 aaKnown RBP15.1■□□□□ 0.01
NR4A1-214ENST00000550339 PARP10Q53GL7 1025 aa15.1■□□□□ 0.01
NR4A1-214ENST00000550339 PPP1R42Q7Z4L9 355 aa15.1■□□□□ 0.01
NR4A1-214ENST00000550339 ITPRIPQ8IWB1 547 aa15.1■□□□□ 0.01
NR4A1-214ENST00000550339 CCDC24Q8N4L8 307 aa15.1■□□□□ 0.01
NR4A1-214ENST00000550339 CCDC191Q8NCU4 936 aa15.1■□□□□ 0.01
NR4A1-214ENST00000550339 UTP14AQ9BVJ6 771 aaKnown RBP15.1■□□□□ 0.01
NR4A1-214ENST00000550339 TRMT112Q9UI30 125 aaKnown RBP15.1■□□□□ 0.01
NR4A1-214ENST00000550339 CARMIL3Q8ND23 1372 aa15.1■□□□□ 0.01
NR4A1-214ENST00000550339 ALDH1L1O75891 902 aa15.09■□□□□ 0.01
NR4A1-214ENST00000550339 GTF2E1P29083 439 aaPredicted RBP15.09■□□□□ 0.01
NR4A1-214ENST00000550339 TRIM28Q13263 835 aaKnown RBP15.09■□□□□ 0.01
NR4A1-214ENST00000550339 NUTM1Q86Y26 1132 aa15.09■□□□□ 0.01
NR4A1-214ENST00000550339 SPON1Q9HCB6 807 aa15.09■□□□□ 0.01
NR4A1-214ENST00000550339 PXDNLA1KZ92 1463 aa15.08■□□□□ 0.01
NR4A1-214ENST00000550339 GCKRQ14397 625 aa15.08■□□□□ 0
NR4A1-214ENST00000550339 INTS3Q68E01 1043 aaKnown RBP15.08■□□□□ 0
NR4A1-214ENST00000550339 SYNE4Q8N205 404 aa15.08■□□□□ 0
NR4A1-214ENST00000550339 FAM89AQ96GI7 184 aa15.08■□□□□ 0
NR4A1-214ENST00000550339 NYXQ9GZU5 481 aa15.08■□□□□ 0
NR4A1-214ENST00000550339 C9orf78Q9NZ63 289 aaPredicted RBP15.08■□□□□ 0
NR4A1-214ENST00000550339 COG6Q9Y2V7 657 aa15.08■□□□□ 0
NR4A1-214ENST00000550339 NTSR2O95665 410 aa15.07■□□□□ 0
NR4A1-214ENST00000550339 IRX6P78412 446 aaPredicted RBP15.07■□□□□ 0
NR4A1-214ENST00000550339 PDE3AQ14432 1141 aa15.07■□□□□ 0
NR4A1-214ENST00000550339 TPTE2Q6XPS3 522 aa15.07■□□□□ 0
NR4A1-214ENST00000550339 CNBD1Q8NA66 436 aa15.07■□□□□ 0
NR4A1-214ENST00000550339 RNF123Q5XPI4 1314 aa15.07■□□□□ 0
NR4A1-214ENST00000550339 COL24A1Q17RW2 1714 aa15.06■□□□□ 0
NR4A1-214ENST00000550339 GRM8O00222 908 aa15.06■□□□□ 0
NR4A1-214ENST00000550339 PTGER2P43116 358 aa15.06■□□□□ 0
NR4A1-214ENST00000550339 ERFEQ4G0M1 354 aa15.06■□□□□ 0
NR4A1-214ENST00000550339 PRR5LQ6MZQ0 368 aa15.06■□□□□ 0
NR4A1-214ENST00000550339 UBE3BQ7Z3V4 1068 aa15.06■□□□□ 0
NR4A1-214ENST00000550339 ZBTB38Q8NAP3 1195 aaPredicted RBP15.06■□□□□ 0
NR4A1-214ENST00000550339 PCCAP05165 728 aaPredicted RBP15.05■□□□□ -0
NR4A1-214ENST00000550339 ST5P78524 1137 aa15.05■□□□□ -0
NR4A1-214ENST00000550339 KLHL34Q8N239 644 aa15.05■□□□□ -0
NR4A1-214ENST00000550339 SGIP1Q9BQI5 828 aa15.05■□□□□ -0
NR4A1-214ENST00000550339 USP44Q9H0E7 712 aa15.05■□□□□ -0
NR4A1-214ENST00000550339 SH3TC1Q8TE82 1336 aa15.05■□□□□ -0
NR4A1-214ENST00000550339 N4BP2Q86UW6 1770 aaPredicted RBP15.05■□□□□ -0
NR4A1-214ENST00000550339 H7C1W4 665 aa15.04■□□□□ -0
NR4A1-214ENST00000550339 NBPF7P0C2Y1 421 aaPredicted RBP15.04■□□□□ -0
NR4A1-214ENST00000550339 HCLS1P14317 486 aaPredicted RBP15.04■□□□□ -0
NR4A1-214ENST00000550339 MVPQ14764 893 aaKnown RBP15.04■□□□□ -0
NR4A1-214ENST00000550339 MEIS3Q99687 375 aa15.04■□□□□ -0
NR4A1-214ENST00000550339 PPP1R1BQ9UD71 204 aaPredicted RBP15.04■□□□□ -0
NR4A1-214ENST00000550339 ABCC12Q96J65 1359 aa15.03■□□□□ -0
NR4A1-214ENST00000550339 IBTKQ9P2D0 1353 aaPredicted RBP15.03■□□□□ -0
NR4A1-214ENST00000550339 IRS4O14654 1257 aaPredicted RBP15.03■□□□□ -0
NR4A1-214ENST00000550339 C1QBPQ07021 282 aaKnown RBP15.03■□□□□ -0
NR4A1-214ENST00000550339 CRBNQ96SW2 442 aa15.03■□□□□ -0
NR4A1-214ENST00000550339 UBTFL1P0CB47 393 aaPredicted RBP15.02■□□□□ -0
NR4A1-214ENST00000550339 DDX19BQ9UMR2 479 aa15.02■□□□□ -0
NR4A1-214ENST00000550339 NRXN2Q9P2S2 1712 aa15.01□□□□□ -0.01
NR4A1-214ENST00000550339 ZBTB7BO15156 539 aaPredicted RBP15.01□□□□□ -0.01
NR4A1-214ENST00000550339 GNAI3P08754 354 aa15.01□□□□□ -0.01
NR4A1-214ENST00000550339 CASP7P55210 303 aa15.01□□□□□ -0.01
NR4A1-214ENST00000550339 SAMD1Q6SPF0 538 aaPredicted RBP15.01□□□□□ -0.01
NR4A1-214ENST00000550339 SUCLG2Q96I99 432 aa15.01□□□□□ -0.01
NR4A1-214ENST00000550339 UTYO14607 1347 aa15□□□□□ -0.01
NR4A1-214ENST00000550339 CDHR2Q9BYE9 1310 aa15□□□□□ -0.01
NR4A1-214ENST00000550339 C3orf67Q6ZVT6 689 aa15□□□□□ -0.01
NR4A1-214ENST00000550339 PDE8AO60658 829 aa14.99□□□□□ -0.01
NR4A1-214ENST00000550339 HSP90B1P14625 803 aaKnown RBP14.99□□□□□ -0.01
NR4A1-214ENST00000550339 SLC10A5Q5PT55 438 aa14.99□□□□□ -0.01
NR4A1-214ENST00000550339 NLRP3Q96P20 1036 aa14.99□□□□□ -0.01
NR4A1-214ENST00000550339 CCDC85AQ96PX6 553 aaPredicted RBP14.99□□□□□ -0.01
NR4A1-214ENST00000550339 BRIP1Q9BX63 1249 aa14.99□□□□□ -0.01
NR4A1-214ENST00000550339 C1orf115Q9H7X2 142 aa14.99□□□□□ -0.01
NR4A1-214ENST00000550339 LRRFIP2Q9Y608 721 aaKnown RBP14.99□□□□□ -0.01
NR4A1-214ENST00000550339 DDX60Q8IY21 1712 aaKnown RBP14.99□□□□□ -0.01
NR4A1-214ENST00000550339 ANKRD31Q8N7Z5 1873 aa14.98□□□□□ -0.01
NR4A1-214ENST00000550339 PDE6BP35913 854 aa14.98□□□□□ -0.01
NR4A1-214ENST00000550339 EPHA10Q5JZY3 1008 aa14.98□□□□□ -0.01
NR4A1-214ENST00000550339 EXOC6Q8TAG9 804 aa14.98□□□□□ -0.01
NR4A1-214ENST00000550339 BICC1Q9H694 974 aaKnown RBP14.98□□□□□ -0.01
NR4A1-214ENST00000550339 CHMP3Q9Y3E7 222 aa14.98□□□□□ -0.01
NR4A1-214ENST00000550339 C10orf71Q711Q0 1435 aa14.98□□□□□ -0.01
NR4A1-214ENST00000550339 TNRC6CQ9HCJ0 1690 aaKnown RBP14.97□□□□□ -0.01
NR4A1-214ENST00000550339 GNAI2P04899 355 aa14.97□□□□□ -0.01
NR4A1-214ENST00000550339 CTSWP56202 376 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms