RNA–Protein interactions for RNA: ENST00000550077.1

AC055716.1-201, humanhuman

BASIC

Gene AC055716.1, Length 495 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.1-201ENST00000550077 TPTE2Q6XPS3 522 aa11.73□□□□□ -0.53
AC055716.1-201ENST00000550077 C3orf67Q6ZVT6 689 aa11.73□□□□□ -0.53
AC055716.1-201ENST00000550077 SAPCD2Q86UD0 394 aa11.73□□□□□ -0.53
AC055716.1-201ENST00000550077 PSMD1Q99460 953 aa11.73□□□□□ -0.53
AC055716.1-201ENST00000550077 BEGAINQ9BUH8 593 aa11.73□□□□□ -0.53
AC055716.1-201ENST00000550077 GLIS2Q9BZE0 524 aaPredicted RBP11.73□□□□□ -0.53
AC055716.1-201ENST00000550077 SHTN1A0MZ66 631 aa11.72□□□□□ -0.53
AC055716.1-201ENST00000550077 CNGB1Q14028 1251 aaPredicted RBP11.72□□□□□ -0.53
AC055716.1-201ENST00000550077 CC2D1BQ5T0F9 858 aaKnown RBP11.72□□□□□ -0.53
AC055716.1-201ENST00000550077 CIAPIN1Q6FI81 312 aa11.72□□□□□ -0.53
AC055716.1-201ENST00000550077 CLEC4GQ6UXB4 293 aa11.72□□□□□ -0.53
AC055716.1-201ENST00000550077 JDP2Q8WYK2 163 aa11.72□□□□□ -0.53
AC055716.1-201ENST00000550077 TAF1P21675 1872 aa11.72□□□□□ -0.53
AC055716.1-201ENST00000550077 U2SURPO15042 1029 aaKnown RBP11.71□□□□□ -0.53
AC055716.1-201ENST00000550077 CELF2O95319 508 aaKnown RBP11.71□□□□□ -0.53
AC055716.1-201ENST00000550077 ALDH1B1P30837 517 aa11.71□□□□□ -0.53
AC055716.1-201ENST00000550077 MAP2K2P36507 400 aa11.71□□□□□ -0.53
AC055716.1-201ENST00000550077 HIRAP54198 1017 aaPredicted RBP11.71□□□□□ -0.53
AC055716.1-201ENST00000550077 EIF6P56537 245 aaKnown RBP11.71□□□□□ -0.53
AC055716.1-201ENST00000550077 SOX10P56693 466 aa11.71□□□□□ -0.53
AC055716.1-201ENST00000550077 CRY2Q49AN0 593 aa11.71□□□□□ -0.53
AC055716.1-201ENST00000550077 POLR2AP24928 1970 aaKnown RBP11.7□□□□□ -0.54
AC055716.1-201ENST00000550077 PER1O15534 1290 aaPredicted RBP11.7□□□□□ -0.54
AC055716.1-201ENST00000550077 LMOD1P29536 600 aaPredicted RBP11.7□□□□□ -0.54
AC055716.1-201ENST00000550077 EIF4G2P78344 907 aaKnown RBP eCLIP11.7□□□□□ -0.54
AC055716.1-201ENST00000550077 DCTN1Q14203 1278 aa11.7□□□□□ -0.54
AC055716.1-201ENST00000550077 USP50Q70EL3 339 aaPredicted RBP11.7□□□□□ -0.54
AC055716.1-201ENST00000550077 MCM10Q7L590 875 aa11.7□□□□□ -0.54
AC055716.1-201ENST00000550077 LARGE2Q8N3Y3 721 aa11.7□□□□□ -0.54
AC055716.1-201ENST00000550077 CXCL9Q07325 125 aa11.69□□□□□ -0.54
AC055716.1-201ENST00000550077 AOC3Q16853 763 aa11.69□□□□□ -0.54
AC055716.1-201ENST00000550077 NPM2Q86SE8 214 aaKnown RBP11.69□□□□□ -0.54
AC055716.1-201ENST00000550077 NGEFQ8N5V2 710 aa11.69□□□□□ -0.54
AC055716.1-201ENST00000550077 ZNF408Q9H9D4 720 aa11.69□□□□□ -0.54
AC055716.1-201ENST00000550077 MIS18AQ9NYP9 233 aa11.69□□□□□ -0.54
AC055716.1-201ENST00000550077 GPRC5DQ9NZD1 345 aa11.69□□□□□ -0.54
AC055716.1-201ENST00000550077 LAMB2P55268 1798 aa11.69□□□□□ -0.54
AC055716.1-201ENST00000550077 UBN2Q6ZU65 1347 aa11.68□□□□□ -0.54
AC055716.1-201ENST00000550077 SNRPA1P09661 255 aaKnown RBP11.68□□□□□ -0.54
AC055716.1-201ENST00000550077 GMPSP49915 693 aaPredicted RBP11.68□□□□□ -0.54
AC055716.1-201ENST00000550077 TTLL7Q6ZT98 887 aa11.68□□□□□ -0.54
AC055716.1-201ENST00000550077 GAS2L2Q8NHY3 880 aa11.68□□□□□ -0.54
AC055716.1-201ENST00000550077 TRPM4Q8TD43 1214 aa11.68□□□□□ -0.54
AC055716.1-201ENST00000550077 ZNF652Q9Y2D9 606 aa11.68□□□□□ -0.54
AC055716.1-201ENST00000550077 LAMB4A4D0S4 1761 aa11.68□□□□□ -0.54
AC055716.1-201ENST00000550077 GPTP24298 496 aa11.67□□□□□ -0.54
AC055716.1-201ENST00000550077 GTF2E1P29083 439 aaPredicted RBP11.67□□□□□ -0.54
AC055716.1-201ENST00000550077 HOXA10P31260 410 aaPredicted RBP11.67□□□□□ -0.54
AC055716.1-201ENST00000550077 BRPF1P55201 1214 aaPredicted RBP11.67□□□□□ -0.54
AC055716.1-201ENST00000550077 SUSD4Q5VX71 490 aa11.67□□□□□ -0.54
AC055716.1-201ENST00000550077 PGAP2Q9UHJ9 254 aa11.67□□□□□ -0.54
AC055716.1-201ENST00000550077 NPC1L1Q9UHC9 1359 aa11.67□□□□□ -0.54
AC055716.1-201ENST00000550077 FAM155AB1AL88 458 aaPredicted RBP11.66□□□□□ -0.54
AC055716.1-201ENST00000550077 PPIP5K2O43314 1243 aa11.66□□□□□ -0.54
AC055716.1-201ENST00000550077 PRKAR2BP31323 418 aa11.66□□□□□ -0.54
AC055716.1-201ENST00000550077 NIM1KQ8IY84 436 aa11.66□□□□□ -0.54
AC055716.1-201ENST00000550077 RSPH6AQ9H0K4 717 aa11.66□□□□□ -0.54
AC055716.1-201ENST00000550077 ADARB2Q9NS39 739 aaKnown RBP11.66□□□□□ -0.54
AC055716.1-201ENST00000550077 RIC1Q4ADV7 1423 aa11.66□□□□□ -0.54
AC055716.1-201ENST00000550077 KIF7Q2M1P5 1343 aa11.65□□□□□ -0.54
AC055716.1-201ENST00000550077 DLG5Q8TDM6 1919 aa11.65□□□□□ -0.54
AC055716.1-201ENST00000550077 PPEF1O14829 653 aaPredicted RBP11.65□□□□□ -0.54
AC055716.1-201ENST00000550077 EGFRP00533 1210 aa11.65□□□□□ -0.54
AC055716.1-201ENST00000550077 USP48Q86UV5 1035 aa11.65□□□□□ -0.54
AC055716.1-201ENST00000550077 RPGRQ92834 1020 aaKnown RBP11.65□□□□□ -0.54
AC055716.1-201ENST00000550077 YDJCA8MPS7 323 aa11.64□□□□□ -0.55
AC055716.1-201ENST00000550077 RAD17O75943 681 aa11.64□□□□□ -0.55
AC055716.1-201ENST00000550077 CC2D2BQ6DHV5 1058 aa11.64□□□□□ -0.55
AC055716.1-201ENST00000550077 HHIPL1Q96JK4 782 aa11.64□□□□□ -0.55
AC055716.1-201ENST00000550077 ZBTB3Q9H5J0 574 aa11.64□□□□□ -0.55
AC055716.1-201ENST00000550077 COL4A1P02462 1669 aa11.64□□□□□ -0.55
AC055716.1-201ENST00000550077 AKAP11Q9UKA4 1901 aa11.64□□□□□ -0.55
AC055716.1-201ENST00000550077 KDM3BQ7LBC6 1761 aa11.64□□□□□ -0.55
AC055716.1-201ENST00000550077 CA12O43570 354 aa11.63□□□□□ -0.55
AC055716.1-201ENST00000550077 NTSR2O95665 410 aa11.63□□□□□ -0.55
AC055716.1-201ENST00000550077 HUNKP57058 714 aa11.63□□□□□ -0.55
AC055716.1-201ENST00000550077 CRAMP1Q96RY5 1269 aa11.63□□□□□ -0.55
AC055716.1-201ENST00000550077 ZNRF3Q9ULT6 936 aa11.63□□□□□ -0.55
AC055716.1-201ENST00000550077 TIMELESSQ9UNS1 1208 aa11.63□□□□□ -0.55
AC055716.1-201ENST00000550077 RRP7AQ9Y3A4 280 aaKnown RBP11.63□□□□□ -0.55
AC055716.1-201ENST00000550077 DUOX1Q9NRD9 1551 aa11.62□□□□□ -0.55
AC055716.1-201ENST00000550077 MAP3K15Q6ZN16 1313 aa11.62□□□□□ -0.55
AC055716.1-201ENST00000550077 TRPA1O75762 1119 aa11.62□□□□□ -0.55
AC055716.1-201ENST00000550077 KIF23Q02241 960 aaPredicted RBP11.62□□□□□ -0.55
AC055716.1-201ENST00000550077 SAMD7Q7Z3H4 446 aa11.62□□□□□ -0.55
AC055716.1-201ENST00000550077 ZNF34Q8IZ26 560 aa11.62□□□□□ -0.55
AC055716.1-201ENST00000550077 ZNF428Q96B54 188 aa11.62□□□□□ -0.55
AC055716.1-201ENST00000550077 RBM17Q96I25 401 aaKnown RBP11.62□□□□□ -0.55
AC055716.1-201ENST00000550077 RNF186Q9NXI6 227 aa11.62□□□□□ -0.55
AC055716.1-201ENST00000550077 ZBTB12Q9Y330 459 aaPredicted RBP11.62□□□□□ -0.55
AC055716.1-201ENST00000550077 ATP6V0A2Q9Y487 856 aa11.62□□□□□ -0.55
AC055716.1-201ENST00000550077 PDE4DIPQ5VU43 2346 aa11.61□□□□□ -0.55
AC055716.1-201ENST00000550077 ADM5C9JUS6 153 aa11.61□□□□□ -0.55
AC055716.1-201ENST00000550077 RGL2O15211 777 aa11.61□□□□□ -0.55
AC055716.1-201ENST00000550077 MYL6BP14649 208 aa11.61□□□□□ -0.55
AC055716.1-201ENST00000550077 NYXQ9GZU5 481 aa11.61□□□□□ -0.55
AC055716.1-201ENST00000550077 KCNQ5Q9NR82 932 aa11.61□□□□□ -0.55
AC055716.1-201ENST00000550077 CNOT7Q9UIV1 285 aaKnown RBP11.61□□□□□ -0.55
AC055716.1-201ENST00000550077 ANKRD36CQ5JPF3 1778 aa11.61□□□□□ -0.55
AC055716.1-201ENST00000550077 ABCC4O15439 1325 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms