RNA–Protein interactions for RNA: ENST00000549935.6

CALCOCO1-217, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 2,112 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-217ENST00000549935 KRT85P78386 507 aa15.17■□□□□ 0.02
CALCOCO1-217ENST00000549935 PLCB2Q00722 1185 aa15.17■□□□□ 0.02
CALCOCO1-217ENST00000549935 ZNF530Q6P9A1 599 aaPredicted RBP15.17■□□□□ 0.02
CALCOCO1-217ENST00000549935 CCDC83Q8IWF9 413 aa15.17■□□□□ 0.02
CALCOCO1-217ENST00000549935 NUP62CLQ9H1M0 184 aa15.17■□□□□ 0.02
CALCOCO1-217ENST00000549935 DNAJC5Q9H3Z4 198 aa15.17■□□□□ 0.02
CALCOCO1-217ENST00000549935 OGFRQ9NZT2 677 aa15.17■□□□□ 0.02
CALCOCO1-217ENST00000549935 ADCY9O60503 1353 aa15.17■□□□□ 0.02
CALCOCO1-217ENST00000549935 KDM3BQ7LBC6 1761 aa15.17■□□□□ 0.02
CALCOCO1-217ENST00000549935 TYRO3Q06418 890 aa15.17■□□□□ 0.02
CALCOCO1-217ENST00000549935 ST3GAL1Q11201 340 aa15.17■□□□□ 0.02
CALCOCO1-217ENST00000549935 PAXBP1Q9Y5B6 917 aa15.17■□□□□ 0.02
CALCOCO1-217ENST00000549935 FAM177BA6PVY3 158 aa15.16■□□□□ 0.02
CALCOCO1-217ENST00000549935 PDCP20941 246 aa15.16■□□□□ 0.02
CALCOCO1-217ENST00000549935 TTC6Q86TZ1 520 aa15.16■□□□□ 0.02
CALCOCO1-217ENST00000549935 PLA2G4DQ86XP0 818 aa15.16■□□□□ 0.02
CALCOCO1-217ENST00000549935 SPC24Q8NBT2 197 aa15.16■□□□□ 0.02
CALCOCO1-217ENST00000549935 NFAT5O94916 1531 aa15.16■□□□□ 0.02
CALCOCO1-217ENST00000549935 CAVIN2O95810 425 aa15.16■□□□□ 0.02
CALCOCO1-217ENST00000549935 PTGS1P23219 599 aa15.16■□□□□ 0.02
CALCOCO1-217ENST00000549935 NCBP1Q09161 790 aaKnown RBP15.16■□□□□ 0.02
CALCOCO1-217ENST00000549935 NECTIN1Q15223 517 aa15.16■□□□□ 0.02
CALCOCO1-217ENST00000549935 TDRD7Q8NHU6 1098 aaKnown RBP15.16■□□□□ 0.02
CALCOCO1-217ENST00000549935 ALDH8A1Q9H2A2 487 aaPredicted RBP15.16■□□□□ 0.02
CALCOCO1-217ENST00000549935 DDX19AQ9NUU7 478 aaKnown RBP15.16■□□□□ 0.02
CALCOCO1-217ENST00000549935 RGPD2P0DJD1 1756 aa15.15■□□□□ 0.02
CALCOCO1-217ENST00000549935 CPA1P15085 419 aa15.15■□□□□ 0.02
CALCOCO1-217ENST00000549935 AKAP4Q5JQC9 854 aa15.15■□□□□ 0.02
CALCOCO1-217ENST00000549935 JAKMIP1Q96N16 626 aaKnown RBP15.15■□□□□ 0.02
CALCOCO1-217ENST00000549935 CHMP4AQ9BY43 222 aa15.15■□□□□ 0.02
CALCOCO1-217ENST00000549935 SCAND2PQ9GZW5 306 aaPredicted RBP15.15■□□□□ 0.02
CALCOCO1-217ENST00000549935 U2AF2P26368 475 aaKnown RBP eCLIP15.14■□□□□ 0.016e-14■■■■□ 20.9
CALCOCO1-217ENST00000549935 CDC25BP30305 580 aa15.14■□□□□ 0.01
CALCOCO1-217ENST00000549935 PSME1Q06323 249 aa15.14■□□□□ 0.01
CALCOCO1-217ENST00000549935 ME3Q16798 604 aa15.14■□□□□ 0.01
CALCOCO1-217ENST00000549935 TPRNQ4KMQ1 711 aa15.14■□□□□ 0.01
CALCOCO1-217ENST00000549935 CLASRPQ8N2M8 674 aaKnown RBP15.14■□□□□ 0.01
CALCOCO1-217ENST00000549935 SNRKQ9NRH2 765 aa15.14■□□□□ 0.01
CALCOCO1-217ENST00000549935 C9orf78Q9NZ63 289 aaPredicted RBP15.14■□□□□ 0.01
CALCOCO1-217ENST00000549935 DBF4Q9UBU7 674 aaPredicted RBP15.14■□□□□ 0.01
CALCOCO1-217ENST00000549935 MAP3K2Q9Y2U5 619 aa15.14■□□□□ 0.01
CALCOCO1-217ENST00000549935 NPHP3Q7Z494 1330 aa15.14■□□□□ 0.01
CALCOCO1-217ENST00000549935 MTX1Q13505 466 aa15.14■□□□□ 0.01
CALCOCO1-217ENST00000549935 PROSER3Q2NL68 480 aa15.14■□□□□ 0.01
CALCOCO1-217ENST00000549935 ESCO1Q5FWF5 840 aa15.14■□□□□ 0.01
CALCOCO1-217ENST00000549935 TAF3Q5VWG9 929 aa15.14■□□□□ 0.01
CALCOCO1-217ENST00000549935 CCDC186Q7Z3E2 898 aa15.14■□□□□ 0.01
CALCOCO1-217ENST00000549935 CBX8Q9HC52 389 aa15.14■□□□□ 0.01
CALCOCO1-217ENST00000549935 CGNQ9P2M7 1197 aaKnown RBP15.14■□□□□ 0.01
CALCOCO1-217ENST00000549935 CTNNA3Q9UI47 895 aa15.14■□□□□ 0.01
CALCOCO1-217ENST00000549935 ZNF75DP51815 510 aa15.13■□□□□ 0.01
CALCOCO1-217ENST00000549935 PTH1RQ03431 593 aa15.13■□□□□ 0.01
CALCOCO1-217ENST00000549935 GABPB1Q06547 395 aaPredicted RBP15.13■□□□□ 0.01
CALCOCO1-217ENST00000549935 ADCK5Q3MIX3 580 aa15.13■□□□□ 0.01
CALCOCO1-217ENST00000549935 LARP1BQ659C4 914 aaKnown RBP15.13■□□□□ 0.01
CALCOCO1-217ENST00000549935 PA2G4Q9UQ80 394 aaKnown RBP15.13■□□□□ 0.01
CALCOCO1-217ENST00000549935 LMO7Q8WWI1 1683 aa15.13■□□□□ 0.01
CALCOCO1-217ENST00000549935 VPS37CA5D8V6 355 aaPredicted RBP15.13■□□□□ 0.01
CALCOCO1-217ENST00000549935 ZKSCAN1P17029 563 aaPredicted RBP15.13■□□□□ 0.01
CALCOCO1-217ENST00000549935 LIG1P18858 919 aa15.13■□□□□ 0.01
CALCOCO1-217ENST00000549935 CWF19L2Q2TBE0 894 aaKnown RBP15.13■□□□□ 0.01
CALCOCO1-217ENST00000549935 PLEKHO1Q53GL0 409 aaPredicted RBP15.13■□□□□ 0.01
CALCOCO1-217ENST00000549935 ZSCAN25Q6NSZ9 544 aa15.13■□□□□ 0.01
CALCOCO1-217ENST00000549935 TNMDQ9H2S6 317 aa15.13■□□□□ 0.01
CALCOCO1-217ENST00000549935 CLSTN2Q9H4D0 955 aa15.13■□□□□ 0.01
CALCOCO1-217ENST00000549935 PRAMEF22A3QJZ6 481 aa15.12■□□□□ 0.01
CALCOCO1-217ENST00000549935 SPDYE4A6NLX3 237 aa15.12■□□□□ 0.01
CALCOCO1-217ENST00000549935 GIGYF1O75420 1035 aaPredicted RBP15.12■□□□□ 0.01
CALCOCO1-217ENST00000549935 PSMA5P28066 241 aa15.12■□□□□ 0.01
CALCOCO1-217ENST00000549935 ANKRD1Q15327 319 aa15.12■□□□□ 0.01
CALCOCO1-217ENST00000549935 C1orf141Q5JVX7 400 aa15.12■□□□□ 0.01
CALCOCO1-217ENST00000549935 PRPF40BQ6NWY9 871 aaKnown RBP15.12■□□□□ 0.01
CALCOCO1-217ENST00000549935 LUZP1Q86V48 1076 aa15.12■□□□□ 0.01
CALCOCO1-217ENST00000549935 KCNH5Q8NCM2 988 aa15.12■□□□□ 0.01
CALCOCO1-217ENST00000549935 PXDNQ92626 1479 aa15.12■□□□□ 0.01
CALCOCO1-217ENST00000549935 RNMTO43148 476 aaKnown RBP15.11■□□□□ 0.01
CALCOCO1-217ENST00000549935 DTNBO60941 627 aa15.11■□□□□ 0.01
CALCOCO1-217ENST00000549935 IFIT2P09913 472 aaKnown RBP15.11■□□□□ 0.01
CALCOCO1-217ENST00000549935 EVI5LQ96CN4 794 aa15.11■□□□□ 0.01
CALCOCO1-217ENST00000549935 ECHDC1Q9NTX5 307 aa15.11■□□□□ 0.01
CALCOCO1-217ENST00000549935 DDX41Q9UJV9 622 aaKnown RBP15.11■□□□□ 0.01
CALCOCO1-217ENST00000549935 TPCN1Q9ULQ1 816 aa15.11■□□□□ 0.01
CALCOCO1-217ENST00000549935 HIP1O00291 1037 aa15.11■□□□□ 0.01
CALCOCO1-217ENST00000549935 NEMFO60524 1076 aa15.11■□□□□ 0.01
CALCOCO1-217ENST00000549935 ANO6Q4KMQ2 910 aa15.11■□□□□ 0.01
CALCOCO1-217ENST00000549935 MAP4K1Q92918 833 aa15.11■□□□□ 0.01
CALCOCO1-217ENST00000549935 MORC2Q9Y6X9 1032 aaPredicted RBP15.11■□□□□ 0.01
CALCOCO1-217ENST00000549935 TNNT1P13805 278 aa15.1■□□□□ 0.01
CALCOCO1-217ENST00000549935 SARM1Q6SZW1 724 aa15.1■□□□□ 0.01
CALCOCO1-217ENST00000549935 KSR2Q6VAB6 950 aa15.1■□□□□ 0.01
CALCOCO1-217ENST00000549935 AACSQ86V21 672 aa15.1■□□□□ 0.01
CALCOCO1-217ENST00000549935 GPATCH3Q96I76 525 aa15.1■□□□□ 0.01
CALCOCO1-217ENST00000549935 DACT1Q9NYF0 836 aa15.1■□□□□ 0.01
CALCOCO1-217ENST00000549935 ALDH1L1O75891 902 aa15.1■□□□□ 0.01
CALCOCO1-217ENST00000549935 AMOTQ4VCS5 1084 aa15.1■□□□□ 0.01
CALCOCO1-217ENST00000549935 CREB3L3Q68CJ9 461 aa15.1■□□□□ 0.01
CALCOCO1-217ENST00000549935 CDC37L1Q7L3B6 337 aa15.1■□□□□ 0.01
CALCOCO1-217ENST00000549935 RBM6P78332 1123 aaKnown RBP15.09■□□□□ 0.01
CALCOCO1-217ENST00000549935 ERC1Q8IUD2 1116 aa15.09■□□□□ 0.01
CALCOCO1-217ENST00000549935 CCDC112Q8NEF3 446 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms