RNA–Protein interactions for RNA: ENST00000549526.1

SMARCD1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-207ENST00000549526 NPM2Q86SE8 214 aaKnown RBP11.47□□□□□ -0.57
SMARCD1-207ENST00000549526 NIM1KQ8IY84 436 aa11.47□□□□□ -0.57
SMARCD1-207ENST00000549526 HIRAP54198 1017 aaPredicted RBP11.46□□□□□ -0.57
SMARCD1-207ENST00000549526 INTS3Q68E01 1043 aaKnown RBP11.46□□□□□ -0.57
SMARCD1-207ENST00000549526 POLR2AP24928 1970 aaKnown RBP11.46□□□□□ -0.58
SMARCD1-207ENST00000549526 CENPFP49454 3210 aa11.46□□□□□ -0.58
SMARCD1-207ENST00000549526 PAPPA2Q9BXP8 1791 aa11.46□□□□□ -0.58
SMARCD1-207ENST00000549526 SLC10A3P09131 477 aa11.45□□□□□ -0.58
SMARCD1-207ENST00000549526 GMPSP49915 693 aaPredicted RBP11.45□□□□□ -0.58
SMARCD1-207ENST00000549526 VSIG10Q8N0Z9 540 aa11.45□□□□□ -0.58
SMARCD1-207ENST00000549526 OTUD5Q96G74 571 aa11.45□□□□□ -0.58
SMARCD1-207ENST00000549526 SLC52A2Q9HAB3 445 aa11.45□□□□□ -0.58
SMARCD1-207ENST00000549526 SCN7AQ01118 1682 aa11.45□□□□□ -0.58
SMARCD1-207ENST00000549526 CEP290O15078 2479 aa11.45□□□□□ -0.58
SMARCD1-207ENST00000549526 KLRG2A4D1S0 409 aaPredicted RBP11.44□□□□□ -0.58
SMARCD1-207ENST00000549526 EN2P19622 333 aaPredicted RBP11.44□□□□□ -0.58
SMARCD1-207ENST00000549526 NEUROD1Q13562 356 aa11.44□□□□□ -0.58
SMARCD1-207ENST00000549526 CC2D2BQ6DHV5 1058 aa11.44□□□□□ -0.58
SMARCD1-207ENST00000549526 TPTE2Q6XPS3 522 aa11.44□□□□□ -0.58
SMARCD1-207ENST00000549526 SIN3AQ96ST3 1273 aa11.44□□□□□ -0.58
SMARCD1-207ENST00000549526 BCL2L13Q9BXK5 485 aa11.44□□□□□ -0.58
SMARCD1-207ENST00000549526 POLKQ9UBT6 870 aa11.44□□□□□ -0.58
SMARCD1-207ENST00000549526 H0YGN5 161 aa11.43□□□□□ -0.58
SMARCD1-207ENST00000549526 GPR25O00155 361 aa11.43□□□□□ -0.58
SMARCD1-207ENST00000549526 CXCL9Q07325 125 aa11.43□□□□□ -0.58
SMARCD1-207ENST00000549526 LGR6Q9HBX8 967 aa11.43□□□□□ -0.58
SMARCD1-207ENST00000549526 NPC1L1Q9UHC9 1359 aa11.42□□□□□ -0.58
SMARCD1-207ENST00000549526 SLC24A1O60721 1099 aa11.42□□□□□ -0.58
SMARCD1-207ENST00000549526 GRIPAP1Q4V328 841 aa11.42□□□□□ -0.58
SMARCD1-207ENST00000549526 CHRDL2Q6WN34 429 aa11.42□□□□□ -0.58
SMARCD1-207ENST00000549526 KRT26Q7Z3Y9 468 aa11.42□□□□□ -0.58
SMARCD1-207ENST00000549526 TRPM4Q8TD43 1214 aa11.42□□□□□ -0.58
SMARCD1-207ENST00000549526 CNOT7Q9UIV1 285 aaKnown RBP11.42□□□□□ -0.58
SMARCD1-207ENST00000549526 FAM177BA6PVY3 158 aa11.41□□□□□ -0.58
SMARCD1-207ENST00000549526 H7C1D1 291 aa11.41□□□□□ -0.58
SMARCD1-207ENST00000549526 PPIP5K2O43314 1243 aa11.41□□□□□ -0.58
SMARCD1-207ENST00000549526 FKTNO75072 461 aa11.41□□□□□ -0.58
SMARCD1-207ENST00000549526 CAMTA2O94983 1202 aa11.41□□□□□ -0.58
SMARCD1-207ENST00000549526 IL6STP40189 918 aaPredicted RBP11.41□□□□□ -0.58
SMARCD1-207ENST00000549526 TNNT2P45379 298 aaPredicted RBP11.41□□□□□ -0.58
SMARCD1-207ENST00000549526 TESK2Q96S53 571 aa11.41□□□□□ -0.58
SMARCD1-207ENST00000549526 ZNRF3Q9ULT6 936 aa11.41□□□□□ -0.58
SMARCD1-207ENST00000549526 RBBP6Q7Z6E9 1792 aaKnown RBP11.41□□□□□ -0.58
SMARCD1-207ENST00000549526 KIAA0100Q14667 2235 aaKnown RBP11.4□□□□□ -0.58
SMARCD1-207ENST00000549526 TCERG1O14776 1098 aaKnown RBP11.4□□□□□ -0.58
SMARCD1-207ENST00000549526 GTF2E1P29083 439 aaPredicted RBP11.4□□□□□ -0.58
SMARCD1-207ENST00000549526 TNIP1Q15025 636 aa11.4□□□□□ -0.58
SMARCD1-207ENST00000549526 AOC3Q16853 763 aa11.4□□□□□ -0.58
SMARCD1-207ENST00000549526 DZIP3Q86Y13 1208 aaKnown RBP11.4□□□□□ -0.58
SMARCD1-207ENST00000549526 DCPSQ96C86 337 aaKnown RBP11.4□□□□□ -0.58
SMARCD1-207ENST00000549526 RBM27Q9P2N5 1060 aaKnown RBP11.4□□□□□ -0.58
SMARCD1-207ENST00000549526 SNED1Q8TER0 1413 aa11.4□□□□□ -0.58
SMARCD1-207ENST00000549526 HTTP42858 3142 aa11.39□□□□□ -0.59
SMARCD1-207ENST00000549526 BRCA2P51587 3418 aa11.39□□□□□ -0.59
SMARCD1-207ENST00000549526 ADM5C9JUS6 153 aa11.39□□□□□ -0.59
SMARCD1-207ENST00000549526 RAD17O75943 681 aa11.39□□□□□ -0.59
SMARCD1-207ENST00000549526 RASAL3Q86YV0 1011 aa11.39□□□□□ -0.59
SMARCD1-207ENST00000549526 AEBP1Q8IUX7 1158 aa11.39□□□□□ -0.59
SMARCD1-207ENST00000549526 TTC5Q8N0Z6 440 aa11.39□□□□□ -0.59
SMARCD1-207ENST00000549526 TEX13AQ9BXU3 409 aaPredicted RBP11.39□□□□□ -0.59
SMARCD1-207ENST00000549526 UNC80Q8N2C7 3258 aa11.39□□□□□ -0.59
SMARCD1-207ENST00000549526 RANBP2P49792 3224 aaKnown RBP11.39□□□□□ -0.59
SMARCD1-207ENST00000549526 CDHR2Q9BYE9 1310 aa11.38□□□□□ -0.59
SMARCD1-207ENST00000549526 SHTN1A0MZ66 631 aa11.38□□□□□ -0.59
SMARCD1-207ENST00000549526 A1BGP04217 495 aa11.38□□□□□ -0.59
SMARCD1-207ENST00000549526 NOM1Q5C9Z4 860 aaKnown RBP11.38□□□□□ -0.59
SMARCD1-207ENST00000549526 TMEM106CQ9BVX2 250 aa11.38□□□□□ -0.59
SMARCD1-207ENST00000549526 CARD14Q9BXL6 1004 aa11.38□□□□□ -0.59
SMARCD1-207ENST00000549526 COL25A1Q9BXS0 654 aaPredicted RBP11.38□□□□□ -0.59
SMARCD1-207ENST00000549526 TMX4Q9H1E5 349 aaPredicted RBP11.38□□□□□ -0.59
SMARCD1-207ENST00000549526 TRIM17Q9Y577 477 aa11.38□□□□□ -0.59
SMARCD1-207ENST00000549526 RNMTO43148 476 aaKnown RBP11.37□□□□□ -0.59
SMARCD1-207ENST00000549526 CLEC4GQ6UXB4 293 aa11.37□□□□□ -0.59
SMARCD1-207ENST00000549526 SAMD7Q7Z3H4 446 aa11.37□□□□□ -0.59
SMARCD1-207ENST00000549526 MICALL2Q8IY33 904 aa11.37□□□□□ -0.59
SMARCD1-207ENST00000549526 RPGRQ92834 1020 aaKnown RBP11.37□□□□□ -0.59
SMARCD1-207ENST00000549526 NIP7Q9Y221 180 aaKnown RBP eCLIP11.37□□□□□ -0.59
SMARCD1-207ENST00000549526 ZNF652Q9Y2D9 606 aa11.37□□□□□ -0.59
SMARCD1-207ENST00000549526 SULT6B1Q6IMI4 303 aa11.36□□□□□ -0.59
SMARCD1-207ENST00000549526 VPS33BQ9H267 617 aa11.36□□□□□ -0.59
SMARCD1-207ENST00000549526 TM4SF4P48230 202 aa11.35□□□□□ -0.59
SMARCD1-207ENST00000549526 TBC1D10BQ4KMP7 808 aaPredicted RBP11.35□□□□□ -0.59
SMARCD1-207ENST00000549526 RBM26Q5T8P6 1007 aaKnown RBP11.35□□□□□ -0.59
SMARCD1-207ENST00000549526 UBR2Q8IWV8 1755 aa11.35□□□□□ -0.59
SMARCD1-207ENST00000549526 PPEF1O14829 653 aaPredicted RBP11.34□□□□□ -0.59
SMARCD1-207ENST00000549526 CRY2Q49AN0 593 aa11.34□□□□□ -0.59
SMARCD1-207ENST00000549526 OTOP1Q7RTM1 612 aa11.34□□□□□ -0.59
SMARCD1-207ENST00000549526 SLC51AQ86UW1 340 aa11.34□□□□□ -0.59
SMARCD1-207ENST00000549526 SULF1Q8IWU6 871 aa11.34□□□□□ -0.59
SMARCD1-207ENST00000549526 ZNF496Q96IT1 587 aaPredicted RBP11.34□□□□□ -0.59
SMARCD1-207ENST00000549526 PCGF6Q9BYE7 350 aa11.34□□□□□ -0.59
SMARCD1-207ENST00000549526 R3HDMLQ9H3Y0 253 aa11.34□□□□□ -0.59
SMARCD1-207ENST00000549526 PRAMEF22A3QJZ6 481 aa11.33□□□□□ -0.6
SMARCD1-207ENST00000549526 SUPT20HQ8NEM7 779 aa11.33□□□□□ -0.6
SMARCD1-207ENST00000549526 DPF3Q92784 378 aa11.33□□□□□ -0.6
SMARCD1-207ENST00000549526 PTPN22Q9Y2R2 807 aa11.33□□□□□ -0.6
SMARCD1-207ENST00000549526 ZBTB12Q9Y330 459 aaPredicted RBP11.33□□□□□ -0.6
SMARCD1-207ENST00000549526 MRC1P22897 1456 aa11.32□□□□□ -0.6
SMARCD1-207ENST00000549526 HEG1Q9ULI3 1381 aa11.32□□□□□ -0.6
SMARCD1-207ENST00000549526 EGFRP00533 1210 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms