RNA–Protein interactions for RNA: ENST00000549416.1

PRDM4-204, Transcript of PR/SET domain 4, humanhuman

TSL 2

Gene PRDM4, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-204ENST00000549416 TRERF1Q96PN7 1200 aa8.41□□□□□ -1.06
PRDM4-204ENST00000549416 USP20Q9Y2K6 914 aa8.41□□□□□ -1.06
PRDM4-204ENST00000549416 FGFR3P22607 806 aa8.4□□□□□ -1.06
PRDM4-204ENST00000549416 ZAP70P43403 619 aa8.4□□□□□ -1.06
PRDM4-204ENST00000549416 EIF1AXP47813 144 aaKnown RBP8.4□□□□□ -1.06
PRDM4-204ENST00000549416 ARSDP51689 593 aa8.4□□□□□ -1.06
PRDM4-204ENST00000549416 KCNQ4P56696 695 aa8.4□□□□□ -1.06
PRDM4-204ENST00000549416 CTBSQ01459 385 aa8.4□□□□□ -1.06
PRDM4-204ENST00000549416 NOM1Q5C9Z4 860 aaKnown RBP8.4□□□□□ -1.06
PRDM4-204ENST00000549416 COL25A1Q9BXS0 654 aaPredicted RBP8.4□□□□□ -1.06
PRDM4-204ENST00000549416 PHF24Q9UPV7 400 aa8.4□□□□□ -1.06
PRDM4-204ENST00000549416 FAM13AO94988 1023 aa8.39□□□□□ -1.07
PRDM4-204ENST00000549416 CD33P20138 364 aa8.39□□□□□ -1.07
PRDM4-204ENST00000549416 GMPRP36959 345 aa8.39□□□□□ -1.07
PRDM4-204ENST00000549416 ARHGAP4P98171 946 aa8.39□□□□□ -1.07
PRDM4-204ENST00000549416 LAMC2Q13753 1193 aa8.39□□□□□ -1.07
PRDM4-204ENST00000549416 GLYCTKQ8IVS8 523 aa8.39□□□□□ -1.07
PRDM4-204ENST00000549416 C2CD2LO14523 706 aa8.38□□□□□ -1.07
PRDM4-204ENST00000549416 MARK1Q9P0L2 795 aa8.38□□□□□ -1.07
PRDM4-204ENST00000549416 FAM182BQ5T319 152 aa8.37□□□□□ -1.07
PRDM4-204ENST00000549416 RGL4Q8IZJ4 473 aa8.37□□□□□ -1.07
PRDM4-204ENST00000549416 GPR152Q8TDT2 470 aa8.37□□□□□ -1.07
PRDM4-204ENST00000549416 KCNH4Q9UQ05 1017 aa8.37□□□□□ -1.07
PRDM4-204ENST00000549416 RTCBQ9Y3I0 505 aaKnown RBP8.37□□□□□ -1.07
PRDM4-204ENST00000549416 FZD6O60353 706 aa8.36□□□□□ -1.07
PRDM4-204ENST00000549416 MX2P20592 715 aa8.36□□□□□ -1.07
PRDM4-204ENST00000549416 ALKBH2Q6NS38 261 aa8.36□□□□□ -1.07
PRDM4-204ENST00000549416 CNTNAP3BQ96NU0 1288 aa8.36□□□□□ -1.07
PRDM4-204ENST00000549416 CNTNAP3Q9BZ76 1288 aa8.36□□□□□ -1.07
PRDM4-204ENST00000549416 MBIPQ9NS73 344 aa8.36□□□□□ -1.07
PRDM4-204ENST00000549416 KCNMB2Q9Y691 235 aa8.36□□□□□ -1.07
PRDM4-204ENST00000549416 EDEM1Q92611 657 aa8.35□□□□□ -1.07
PRDM4-204ENST00000549416 SLC30A3Q99726 388 aa8.35□□□□□ -1.07
PRDM4-204ENST00000549416 CCDC87Q9NVE4 849 aa8.35□□□□□ -1.07
PRDM4-204ENST00000549416 EPB42P16452 691 aa8.34□□□□□ -1.07
PRDM4-204ENST00000549416 TRIM26Q12899 539 aaPredicted RBP8.34□□□□□ -1.07
PRDM4-204ENST00000549416 TRIP4Q15650 581 aaPredicted RBP8.34□□□□□ -1.07
PRDM4-204ENST00000549416 CMTR1Q8N1G2 835 aaKnown RBP8.34□□□□□ -1.07
PRDM4-204ENST00000549416 NUDT16Q96DE0 195 aaKnown RBP8.34□□□□□ -1.07
PRDM4-204ENST00000549416 GSX2Q9BZM3 304 aa8.34□□□□□ -1.07
PRDM4-204ENST00000549416 GZF1Q9H116 711 aaPredicted RBP8.34□□□□□ -1.07
PRDM4-204ENST00000549416 PDGFAP04085 211 aa8.33□□□□□ -1.08
PRDM4-204ENST00000549416 MZF1P28698 734 aaPredicted RBP8.33□□□□□ -1.08
PRDM4-204ENST00000549416 DNM1Q05193 864 aaKnown RBP8.33□□□□□ -1.08
PRDM4-204ENST00000549416 SPEM2Q0P670 501 aa8.33□□□□□ -1.08
PRDM4-204ENST00000549416 PIK3R5Q8WYR1 880 aa8.33□□□□□ -1.08
PRDM4-204ENST00000549416 FAM13BQ9NYF5 915 aa8.33□□□□□ -1.08
PRDM4-204ENST00000549416 BIN2Q9UBW5 565 aaPredicted RBP8.33□□□□□ -1.08
PRDM4-204ENST00000549416 POLIQ9UNA4 740 aa8.33□□□□□ -1.08
PRDM4-204ENST00000549416 IGF1RP08069 1367 aa8.33□□□□□ -1.08
PRDM4-204ENST00000549416 BMP4P12644 408 aa8.32□□□□□ -1.08
PRDM4-204ENST00000549416 SRSF11Q05519 484 aaKnown RBP8.32□□□□□ -1.08
PRDM4-204ENST00000549416 AAMPQ13685 434 aa8.32□□□□□ -1.08
PRDM4-204ENST00000549416 GGNBP2Q9H3C7 697 aa8.32□□□□□ -1.08
PRDM4-204ENST00000549416 C11orf16Q9NQ32 467 aa8.32□□□□□ -1.08
PRDM4-204ENST00000549416 EGFRP00533 1210 aa8.31□□□□□ -1.08
PRDM4-204ENST00000549416 CCINQ13939 588 aa8.31□□□□□ -1.08
PRDM4-204ENST00000549416 SND1Q7KZF4 910 aaKnown RBP eCLIP8.31□□□□□ -1.08
PRDM4-204ENST00000549416 RAB44Q7Z6P3 723 aaPredicted RBP8.31□□□□□ -1.08
PRDM4-204ENST00000549416 KLF15Q9UIH9 416 aa8.31□□□□□ -1.08
PRDM4-204ENST00000549416 ZBTB7CA1YPR0 619 aa8.3□□□□□ -1.08
PRDM4-204ENST00000549416 A6NHS1 94 aa8.3□□□□□ -1.08
PRDM4-204ENST00000549416 XYLBO75191 536 aa8.3□□□□□ -1.08
PRDM4-204ENST00000549416 ADAMTS2O95450 1211 aa8.3□□□□□ -1.08
PRDM4-204ENST00000549416 UBAP1LF5GYI3 381 aa8.29□□□□□ -1.08
PRDM4-204ENST00000549416 SASH3O75995 380 aa8.29□□□□□ -1.08
PRDM4-204ENST00000549416 TARSP26639 723 aaKnown RBP8.29□□□□□ -1.08
PRDM4-204ENST00000549416 MAP2K3P46734 347 aa8.29□□□□□ -1.08
PRDM4-204ENST00000549416 ZNF468Q5VIY5 522 aaPredicted RBP8.29□□□□□ -1.08
PRDM4-204ENST00000549416 KRT25Q7Z3Z0 450 aa8.29□□□□□ -1.08
PRDM4-204ENST00000549416 GJD3Q8N144 294 aa8.29□□□□□ -1.08
PRDM4-204ENST00000549416 BHMTQ93088 406 aa8.29□□□□□ -1.08
PRDM4-204ENST00000549416 ZFATQ9P243 1243 aa8.29□□□□□ -1.08
PRDM4-204ENST00000549416 PRR12Q9ULL5 1215 aa8.29□□□□□ -1.08
PRDM4-204ENST00000549416 NSFL1CQ9UNZ2 370 aaKnown RBP8.29□□□□□ -1.08
PRDM4-204ENST00000549416 WIPF1O43516 503 aa8.28□□□□□ -1.08
PRDM4-204ENST00000549416 SLURP2P0DP57 97 aa8.28□□□□□ -1.08
PRDM4-204ENST00000549416 SYT9Q86SS6 491 aa8.28□□□□□ -1.08
PRDM4-204ENST00000549416 ACDQ96AP0 544 aa8.28□□□□□ -1.08
PRDM4-204ENST00000549416 BRPF3Q9ULD4 1205 aa8.28□□□□□ -1.08
PRDM4-204ENST00000549416 ARAFP10398 606 aa8.27□□□□□ -1.09
PRDM4-204ENST00000549416 NFKB1P19838 968 aa8.27□□□□□ -1.09
PRDM4-204ENST00000549416 PCBP4P57723 403 aaKnown RBP8.27□□□□□ -1.09
PRDM4-204ENST00000549416 C8orf34Q49A92 452 aa8.27□□□□□ -1.09
PRDM4-204ENST00000549416 AVENQ9NQS1 362 aaPredicted RBP8.27□□□□□ -1.09
PRDM4-204ENST00000549416 DCTN4Q9UJW0 460 aa8.27□□□□□ -1.09
PRDM4-204ENST00000549416 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.27□□□□□ -1.09
PRDM4-204ENST00000549416 NDUFB5O43674 189 aa8.26□□□□□ -1.09
PRDM4-204ENST00000549416 IGHA2P01877 340 aa8.26□□□□□ -1.09
PRDM4-204ENST00000549416 RPLP1P05386 114 aaKnown RBP8.26□□□□□ -1.09
PRDM4-204ENST00000549416 PCSK2P16519 638 aa8.26□□□□□ -1.09
PRDM4-204ENST00000549416 XKR5Q6UX68 686 aa8.26□□□□□ -1.09
PRDM4-204ENST00000549416 C1orf229Q6ZS94 237 aaPredicted RBP8.26□□□□□ -1.09
PRDM4-204ENST00000549416 NLRP13Q86W25 1043 aa8.26□□□□□ -1.09
PRDM4-204ENST00000549416 FCHSD1Q86WN1 690 aa8.26□□□□□ -1.09
PRDM4-204ENST00000549416 WHAMMQ8TF30 809 aa8.26□□□□□ -1.09
PRDM4-204ENST00000549416 FAM129BQ96TA1 746 aa8.26□□□□□ -1.09
PRDM4-204ENST00000549416 OXCT2Q9BYC2 517 aaPredicted RBP8.26□□□□□ -1.09
PRDM4-204ENST00000549416 RBCK1Q9BYM8 510 aa8.26□□□□□ -1.09
PRDM4-204ENST00000549416 EFCC1Q9HA90 598 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms