RNA–Protein interactions for RNA: ENST00000549042.1

MBD6-208, Transcript of methyl-CpG binding domain protein 6, human

TSL 4

Gene MBD6, Length 533 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD6-208	ENST00000549042	NPM2	Q86SE8	214 aa	Known RBP	13.99	□□□□□ -0.17
MBD6-208	ENST00000549042	RNMT	O43148	476 aa	Known RBP	13.98	□□□□□ -0.17
MBD6-208	ENST00000549042	IL6ST	P40189	918 aa	Predicted RBP	13.98	□□□□□ -0.17
MBD6-208	ENST00000549042	GMPS	P49915	693 aa	Predicted RBP	13.98	□□□□□ -0.17
MBD6-208	ENST00000549042	USP48	Q86UV5	1035 aa		13.98	□□□□□ -0.17
MBD6-208	ENST00000549042	ZC3H15	Q8WU90	426 aa	Known RBP	13.98	□□□□□ -0.17
MBD6-208	ENST00000549042	CSRNP1	Q96S65	589 aa		13.98	□□□□□ -0.17
MBD6-208	ENST00000549042	COLQ	Q9Y215	455 aa	Predicted RBP	13.98	□□□□□ -0.17
MBD6-208	ENST00000549042	HIRA	P54198	1017 aa	Predicted RBP	13.97	□□□□□ -0.17
MBD6-208	ENST00000549042	SULT6B1	Q6IMI4	303 aa		13.97	□□□□□ -0.17
MBD6-208	ENST00000549042	GBA2	Q9HCG7	927 aa	Predicted RBP	13.97	□□□□□ -0.17
MBD6-208	ENST00000549042	NPC1L1	Q9UHC9	1359 aa		13.96	□□□□□ -0.17
MBD6-208	ENST00000549042	CC2D2B	Q6DHV5	1058 aa		13.96	□□□□□ -0.17
MBD6-208	ENST00000549042	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.96	□□□□□ -0.17
MBD6-208	ENST00000549042	DZIP3	Q86Y13	1208 aa	Known RBP	13.96	□□□□□ -0.17
MBD6-208	ENST00000549042	TTC5	Q8N0Z6	440 aa		13.96	□□□□□ -0.17
MBD6-208	ENST00000549042	C2orf69	Q8N8R5	385 aa		13.96	□□□□□ -0.17
MBD6-208	ENST00000549042	TRPM4	Q8TD43	1214 aa		13.96	□□□□□ -0.17
MBD6-208	ENST00000549042	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.96	□□□□□ -0.17
MBD6-208	ENST00000549042	FAM177B	A6PVY3	158 aa		13.95	□□□□□ -0.18
MBD6-208	ENST00000549042	A1BG	P04217	495 aa		13.95	□□□□□ -0.18
MBD6-208	ENST00000549042	SLC10A3	P09131	477 aa		13.95	□□□□□ -0.18
MBD6-208	ENST00000549042	TPTE2	Q6XPS3	522 aa		13.95	□□□□□ -0.18
MBD6-208	ENST00000549042	MKI67	P46013	3256 aa	Known RBP	13.94	□□□□□ -0.18
MBD6-208	ENST00000549042	CEP290	O15078	2479 aa		13.94	□□□□□ -0.18
MBD6-208	ENST00000549042	PPIP5K2	O43314	1243 aa		13.94	□□□□□ -0.18
MBD6-208	ENST00000549042	CXCL9	Q07325	125 aa		13.94	□□□□□ -0.18
MBD6-208	ENST00000549042	SLC51A	Q86UW1	340 aa		13.94	□□□□□ -0.18
MBD6-208	ENST00000549042	ZNF496	Q96IT1	587 aa	Predicted RBP	13.94	□□□□□ -0.18
MBD6-208	ENST00000549042	POTEF	A5A3E0	1075 aa		13.93	□□□□□ -0.18
MBD6-208	ENST00000549042	AOC3	Q16853	763 aa		13.93	□□□□□ -0.18
MBD6-208	ENST00000549042	BCL2L13	Q9BXK5	485 aa		13.93	□□□□□ -0.18
MBD6-208	ENST00000549042	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.93	□□□□□ -0.18
MBD6-208	ENST00000549042	HEG1	Q9ULI3	1381 aa		13.93	□□□□□ -0.18
MBD6-208	ENST00000549042	CDHR2	Q9BYE9	1310 aa		13.92	□□□□□ -0.18
MBD6-208	ENST00000549042	TBC1D8	O95759	1140 aa		13.92	□□□□□ -0.18
MBD6-208	ENST00000549042	CDCA8	Q53HL2	280 aa		13.92	□□□□□ -0.18
MBD6-208	ENST00000549042	KRT26	Q7Z3Y9	468 aa		13.92	□□□□□ -0.18
MBD6-208	ENST00000549042	ZNF652	Q9Y2D9	606 aa		13.92	□□□□□ -0.18
MBD6-208	ENST00000549042		A0A0C4DFX4	3053 aa		13.92	□□□□□ -0.18
MBD6-208	ENST00000549042	SHTN1	A0MZ66	631 aa		13.91	□□□□□ -0.18
MBD6-208	ENST00000549042	TCERG1	O14776	1098 aa	Known RBP	13.91	□□□□□ -0.18
MBD6-208	ENST00000549042	GRIPAP1	Q4V328	841 aa		13.91	□□□□□ -0.18
MBD6-208	ENST00000549042	CLEC4G	Q6UXB4	293 aa		13.91	□□□□□ -0.18
MBD6-208	ENST00000549042	REM2	Q8IYK8	340 aa	Predicted RBP	13.91	□□□□□ -0.18
MBD6-208	ENST00000549042	ZNRF3	Q9ULT6	936 aa		13.91	□□□□□ -0.18
MBD6-208	ENST00000549042	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
MBD6-208	ENST00000549042	GTF2E1	P29083	439 aa	Predicted RBP	13.9	□□□□□ -0.18
MBD6-208	ENST00000549042	PIP4K2A	P48426	406 aa	Predicted RBP	13.9	□□□□□ -0.18
MBD6-208	ENST00000549042	CRY2	Q49AN0	593 aa		13.9	□□□□□ -0.18
MBD6-208	ENST00000549042	SZT2	Q5T011	3432 aa		13.9	□□□□□ -0.18
MBD6-208	ENST00000549042	KIAA0100	Q14667	2235 aa	Known RBP	13.9	□□□□□ -0.18
MBD6-208	ENST00000549042	PAPPA2	Q9BXP8	1791 aa		13.89	□□□□□ -0.19
MBD6-208	ENST00000549042	ADM5	C9JUS6	153 aa		13.89	□□□□□ -0.19
MBD6-208	ENST00000549042	RAD17	O75943	681 aa		13.89	□□□□□ -0.19
MBD6-208	ENST00000549042	RASAL3	Q86YV0	1011 aa		13.89	□□□□□ -0.19
MBD6-208	ENST00000549042	RPGR	Q92834	1020 aa	Known RBP	13.89	□□□□□ -0.19
MBD6-208	ENST00000549042	CNOT7	Q9UIV1	285 aa	Known RBP	13.89	□□□□□ -0.19
MBD6-208	ENST00000549042	POLR2A	P24928	1970 aa	Known RBP	13.89	□□□□□ -0.19
MBD6-208	ENST00000549042	ABCC12	Q96J65	1359 aa		13.88	□□□□□ -0.19
MBD6-208	ENST00000549042		H7C1D1	291 aa		13.88	□□□□□ -0.19
MBD6-208	ENST00000549042	GPR25	O00155	361 aa		13.88	□□□□□ -0.19
MBD6-208	ENST00000549042	PPEF1	O14829	653 aa	Predicted RBP	13.88	□□□□□ -0.19
MBD6-208	ENST00000549042	MICALL2	Q8IY33	904 aa		13.88	□□□□□ -0.19
MBD6-208	ENST00000549042	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.87	□□□□□ -0.19
MBD6-208	ENST00000549042	ZNF790	Q6PG37	636 aa		13.87	□□□□□ -0.19
MBD6-208	ENST00000549042	HOXA10	P31260	410 aa	Predicted RBP	13.86	□□□□□ -0.19
MBD6-208	ENST00000549042	TNIP1	Q15025	636 aa		13.86	□□□□□ -0.19
MBD6-208	ENST00000549042	INTS3	Q68E01	1043 aa	Known RBP	13.86	□□□□□ -0.19
MBD6-208	ENST00000549042	SAMD7	Q7Z3H4	446 aa		13.86	□□□□□ -0.19
MBD6-208	ENST00000549042	VPS33B	Q9H267	617 aa		13.86	□□□□□ -0.19
MBD6-208	ENST00000549042	EN2	P19622	333 aa	Predicted RBP	13.85	□□□□□ -0.19
MBD6-208	ENST00000549042	NOM1	Q5C9Z4	860 aa	Known RBP	13.85	□□□□□ -0.19
MBD6-208	ENST00000549042	NUTM1	Q86Y26	1132 aa		13.85	□□□□□ -0.19
MBD6-208	ENST00000549042	DCPS	Q96C86	337 aa	Known RBP	13.85	□□□□□ -0.19
MBD6-208	ENST00000549042	FMNL2	Q96PY5	1086 aa		13.85	□□□□□ -0.19
MBD6-208	ENST00000549042	RIC1	Q4ADV7	1423 aa		13.84	□□□□□ -0.19
MBD6-208	ENST00000549042		H0YGN5	161 aa		13.84	□□□□□ -0.19
MBD6-208	ENST00000549042	FKTN	O75072	461 aa		13.84	□□□□□ -0.19
MBD6-208	ENST00000549042	IL13	P35225	146 aa		13.84	□□□□□ -0.19
MBD6-208	ENST00000549042	MTHFSD	Q2M296	383 aa	Known RBP	13.84	□□□□□ -0.19
MBD6-208	ENST00000549042	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.84	□□□□□ -0.19
MBD6-208	ENST00000549042	OTUD5	Q96G74	571 aa		13.84	□□□□□ -0.19
MBD6-208	ENST00000549042	KIF7	Q2M1P5	1343 aa		13.84	□□□□□ -0.19
MBD6-208	ENST00000549042	HTT	P42858	3142 aa		13.83	□□□□□ -0.2
MBD6-208	ENST00000549042	EGFR	P00533	1210 aa		13.83	□□□□□ -0.2
MBD6-208	ENST00000549042	MNX1	P50219	401 aa	Predicted RBP	13.83	□□□□□ -0.2
MBD6-208	ENST00000549042	TEF	Q10587	303 aa		13.83	□□□□□ -0.2
MBD6-208	ENST00000549042	SUPT20H	Q8NEM7	779 aa		13.83	□□□□□ -0.2
MBD6-208	ENST00000549042	RBM17	Q96I25	401 aa	Known RBP	13.83	□□□□□ -0.2
MBD6-208	ENST00000549042	CRAMP1	Q96RY5	1269 aa		13.83	□□□□□ -0.2
MBD6-208	ENST00000549042	TMX4	Q9H1E5	349 aa	Predicted RBP	13.83	□□□□□ -0.2
MBD6-208	ENST00000549042	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.83	□□□□□ -0.2
MBD6-208	ENST00000549042	HMOX1	P09601	288 aa		13.82	□□□□□ -0.2
MBD6-208	ENST00000549042	RBM26	Q5T8P6	1007 aa	Known RBP	13.82	□□□□□ -0.2
MBD6-208	ENST00000549042	CHRDL2	Q6WN34	429 aa		13.82	□□□□□ -0.2
MBD6-208	ENST00000549042	CDCA5	Q96FF9	252 aa		13.82	□□□□□ -0.2
MBD6-208	ENST00000549042	USP16	Q9Y5T5	823 aa		13.82	□□□□□ -0.2
MBD6-208	ENST00000549042	SIPA1L3	O60292	1781 aa	Predicted RBP	13.81	□□□□□ -0.2
MBD6-208	ENST00000549042	PRAMEF22	A3QJZ6	481 aa		13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms