RNA–Protein interactions for RNA: ENST00000548979.1

SLC38A1-205, Transcript of solute carrier family 38 member 1, humanhuman

TSL 4

Gene SLC38A1, Length 543 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-205ENST00000548979 ACEP12821 1306 aa11.77□□□□□ -0.53
SLC38A1-205ENST00000548979 ZC3H4Q9UPT8 1303 aaKnown RBP11.77□□□□□ -0.53
SLC38A1-205ENST00000548979 SLIT2O94813 1529 aa11.76□□□□□ -0.53
SLC38A1-205ENST00000548979 ADH1CP00326 375 aa11.76□□□□□ -0.53
SLC38A1-205ENST00000548979 NNTQ13423 1086 aa11.76□□□□□ -0.53
SLC38A1-205ENST00000548979 TRMT44Q8IYL2 757 aaKnown RBP11.76□□□□□ -0.53
SLC38A1-205ENST00000548979 ADAM32Q8TC27 787 aa11.76□□□□□ -0.53
SLC38A1-205ENST00000548979 CARD11Q9BXL7 1154 aa11.76□□□□□ -0.53
SLC38A1-205ENST00000548979 MARF1Q9Y4F3 1742 aaKnown RBP11.75□□□□□ -0.53
SLC38A1-205ENST00000548979 FAM83GA6ND36 823 aa11.75□□□□□ -0.53
SLC38A1-205ENST00000548979 AXIN1O15169 862 aa11.75□□□□□ -0.53
SLC38A1-205ENST00000548979 SMCPP49901 116 aaPredicted RBP11.75□□□□□ -0.53
SLC38A1-205ENST00000548979 PTK2Q05397 1052 aa11.75□□□□□ -0.53
SLC38A1-205ENST00000548979 VPS72Q15906 364 aa11.75□□□□□ -0.53
SLC38A1-205ENST00000548979 ZBTB33Q86T24 672 aa11.74□□□□□ -0.53
SLC38A1-205ENST00000548979 NLRP13Q86W25 1043 aa11.74□□□□□ -0.53
SLC38A1-205ENST00000548979 ABTB2Q8N961 1025 aa11.74□□□□□ -0.53
SLC38A1-205ENST00000548979 ATAD2Q6PL18 1390 aa11.74□□□□□ -0.53
SLC38A1-205ENST00000548979 RGS12O14924 1447 aa11.74□□□□□ -0.53
SLC38A1-205ENST00000548979 PPIP5K1Q6PFW1 1433 aa11.74□□□□□ -0.53
SLC38A1-205ENST00000548979 TRPM1Q7Z4N2 1603 aa11.74□□□□□ -0.53
SLC38A1-205ENST00000548979 TMEM132AQ24JP5 1023 aa11.73□□□□□ -0.53
SLC38A1-205ENST00000548979 CCDC125Q86Z20 511 aa11.73□□□□□ -0.53
SLC38A1-205ENST00000548979 KLF16Q9BXK1 252 aaPredicted RBP11.73□□□□□ -0.53
SLC38A1-205ENST00000548979 CLSPNQ9HAW4 1339 aa11.73□□□□□ -0.53
SLC38A1-205ENST00000548979 TRPM3Q9HCF6 1732 aaPredicted RBP11.73□□□□□ -0.53
SLC38A1-205ENST00000548979 CABP1Q9NZU7 370 aa11.73□□□□□ -0.53
SLC38A1-205ENST00000548979 TIMELESSQ9UNS1 1208 aa11.73□□□□□ -0.53
SLC38A1-205ENST00000548979 TBC1D2BQ9UPU7 963 aa11.73□□□□□ -0.53
SLC38A1-205ENST00000548979 SBNO2Q9Y2G9 1366 aa11.73□□□□□ -0.53
SLC38A1-205ENST00000548979 CCDC9Q9Y3X0 531 aaKnown RBP11.73□□□□□ -0.53
SLC38A1-205ENST00000548979 FBXO45P0C2W1 286 aa11.72□□□□□ -0.53
SLC38A1-205ENST00000548979 CTC1Q2NKJ3 1217 aa11.72□□□□□ -0.53
SLC38A1-205ENST00000548979 VASH1Q7L8A9 365 aaPredicted RBP11.72□□□□□ -0.53
SLC38A1-205ENST00000548979 PRDM11Q9NQV5 511 aa11.72□□□□□ -0.53
SLC38A1-205ENST00000548979 GPSM3Q9Y4H4 160 aa11.72□□□□□ -0.53
SLC38A1-205ENST00000548979 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.72□□□□□ -0.53
SLC38A1-205ENST00000548979 ALS2Q96Q42 1657 aa11.71□□□□□ -0.53
SLC38A1-205ENST00000548979 FSHRP23945 695 aa11.71□□□□□ -0.53
SLC38A1-205ENST00000548979 PUS7Q96PZ0 661 aaKnown RBP11.71□□□□□ -0.53
SLC38A1-205ENST00000548979 BTG4Q9NY30 223 aa11.71□□□□□ -0.53
SLC38A1-205ENST00000548979 QRICH2Q9H0J4 1663 aa11.71□□□□□ -0.54
SLC38A1-205ENST00000548979 NWD2Q9ULI1 1742 aa11.7□□□□□ -0.54
SLC38A1-205ENST00000548979 MCM6Q14566 821 aa11.7□□□□□ -0.54
SLC38A1-205ENST00000548979 MAP4K5Q9Y4K4 846 aa11.7□□□□□ -0.54
SLC38A1-205ENST00000548979 NDUFB9Q9Y6M9 179 aa11.7□□□□□ -0.54
SLC38A1-205ENST00000548979 RALGAPBQ86X10 1494 aa11.7□□□□□ -0.54
SLC38A1-205ENST00000548979 TOPAZ1Q8N9V7 1692 aa11.69□□□□□ -0.54
SLC38A1-205ENST00000548979 TIMP2P16035 220 aa11.69□□□□□ -0.54
SLC38A1-205ENST00000548979 PNMA1Q8ND90 353 aa11.69□□□□□ -0.54
SLC38A1-205ENST00000548979 ZBBXA8MT70 800 aa11.68□□□□□ -0.54
SLC38A1-205ENST00000548979 CAPN5O15484 640 aaPredicted RBP11.68□□□□□ -0.54
SLC38A1-205ENST00000548979 GCP02774 474 aa11.68□□□□□ -0.54
SLC38A1-205ENST00000548979 WDR4P57081 412 aaKnown RBP11.68□□□□□ -0.54
SLC38A1-205ENST00000548979 EVA1CP58658 441 aa11.68□□□□□ -0.54
SLC38A1-205ENST00000548979 ZC3H6P61129 1189 aaKnown RBP11.68□□□□□ -0.54
SLC38A1-205ENST00000548979 NR5A1Q13285 461 aa11.68□□□□□ -0.54
SLC38A1-205ENST00000548979 ITPKCQ96DU7 683 aa11.68□□□□□ -0.54
SLC38A1-205ENST00000548979 SLC10A4Q96EP9 437 aa11.68□□□□□ -0.54
SLC38A1-205ENST00000548979 ZFAND3Q9H8U3 227 aa11.68□□□□□ -0.54
SLC38A1-205ENST00000548979 USP6P35125 1406 aa11.68□□□□□ -0.54
SLC38A1-205ENST00000548979 CPDO75976 1380 aa11.67□□□□□ -0.54
SLC38A1-205ENST00000548979 KIAA0232Q92628 1395 aa11.67□□□□□ -0.54
SLC38A1-205ENST00000548979 COL14A1Q05707 1796 aaKnown RBP11.67□□□□□ -0.54
SLC38A1-205ENST00000548979 USP19O94966 1318 aa11.67□□□□□ -0.54
SLC38A1-205ENST00000548979 TTC21AQ8NDW8 1320 aa11.67□□□□□ -0.54
SLC38A1-205ENST00000548979 BMP1P13497 986 aa11.67□□□□□ -0.54
SLC38A1-205ENST00000548979 IRF5Q13568 498 aa11.67□□□□□ -0.54
SLC38A1-205ENST00000548979 NUTM2GQ5VZR2 741 aa11.67□□□□□ -0.54
SLC38A1-205ENST00000548979 SEPT12Q8IYM1 358 aa11.67□□□□□ -0.54
SLC38A1-205ENST00000548979 KCTD15Q96SI1 283 aaPredicted RBP11.67□□□□□ -0.54
SLC38A1-205ENST00000548979 GDPD2Q9HCC8 539 aa11.67□□□□□ -0.54
SLC38A1-205ENST00000548979 ATP13A2Q9NQ11 1180 aa11.67□□□□□ -0.54
SLC38A1-205ENST00000548979 GMPR2Q9P2T1 348 aaKnown RBP11.67□□□□□ -0.54
SLC38A1-205ENST00000548979 ABCA3Q99758 1704 aa11.66□□□□□ -0.54
SLC38A1-205ENST00000548979 ZNF787Q6DD87 383 aa11.66□□□□□ -0.54
SLC38A1-205ENST00000548979 HDGFL2Q7Z4V5 671 aaPredicted RBP11.66□□□□□ -0.54
SLC38A1-205ENST00000548979 KCNH5Q8NCM2 988 aa11.66□□□□□ -0.54
SLC38A1-205ENST00000548979 SPATA31A5Q5VU36 1347 aa11.65□□□□□ -0.54
SLC38A1-205ENST00000548979 SPATA31A7Q8IWB4 1347 aa11.65□□□□□ -0.54
SLC38A1-205ENST00000548979 KRT27Q7Z3Y8 459 aa11.65□□□□□ -0.54
SLC38A1-205ENST00000548979 TRIM46Q7Z4K8 759 aa11.65□□□□□ -0.54
SLC38A1-205ENST00000548979 TERF2IPQ9NYB0 399 aa11.65□□□□□ -0.54
SLC38A1-205ENST00000548979 PLCH1Q4KWH8 1693 aa11.65□□□□□ -0.55
SLC38A1-205ENST00000548979 TTC21BQ7Z4L5 1316 aa11.64□□□□□ -0.55
SLC38A1-205ENST00000548979 GLI3P10071 1580 aa11.64□□□□□ -0.55
SLC38A1-205ENST00000548979 SSH2Q76I76 1423 aa11.64□□□□□ -0.55
SLC38A1-205ENST00000548979 ZIC2O95409 532 aaPredicted RBP11.64□□□□□ -0.55
SLC38A1-205ENST00000548979 SF3B2Q13435 895 aaKnown RBP11.64□□□□□ -0.55
SLC38A1-205ENST00000548979 CHRNA2Q15822 529 aa11.64□□□□□ -0.55
SLC38A1-205ENST00000548979 CDCA8Q53HL2 280 aa11.64□□□□□ -0.55
SLC38A1-205ENST00000548979 INTS6LQ5JSJ4 861 aaKnown RBP11.64□□□□□ -0.55
SLC38A1-205ENST00000548979 TMC1Q8TDI8 760 aa11.64□□□□□ -0.55
SLC38A1-205ENST00000548979 PCGF6Q9BYE7 350 aa11.64□□□□□ -0.55
SLC38A1-205ENST00000548979 KTN1Q86UP2 1357 aaKnown RBP11.64□□□□□ -0.55
SLC38A1-205ENST00000548979 NINLQ9Y2I6 1382 aa11.64□□□□□ -0.55
SLC38A1-205ENST00000548979 CPSF1Q10570 1443 aaKnown RBP11.63□□□□□ -0.55
SLC38A1-205ENST00000548979 ST20-MTHFSA0A0A6YYL1 179 aa11.63□□□□□ -0.55
SLC38A1-205ENST00000548979 NR1H3Q13133 447 aa11.63□□□□□ -0.55
SLC38A1-205ENST00000548979 DZIP3Q86Y13 1208 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms