RNA–Protein interactions for RNA: ENST00000548821.1

GCN1-205, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 504 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-205ENST00000548821 HACL1Q9UJ83 578 aa12.52□□□□□ -0.41
GCN1-205ENST00000548821 DDNO94850 711 aaPredicted RBP12.51□□□□□ -0.41
GCN1-205ENST00000548821 SUSD4Q5VX71 490 aa12.51□□□□□ -0.41
GCN1-205ENST00000548821 DDX46Q7L014 1031 aaKnown RBP12.51□□□□□ -0.41
GCN1-205ENST00000548821 COPS6Q7L5N1 327 aa12.51□□□□□ -0.41
GCN1-205ENST00000548821 NUTM1Q86Y26 1132 aa12.51□□□□□ -0.41
GCN1-205ENST00000548821 JMYQ8N9B5 988 aa12.51□□□□□ -0.41
GCN1-205ENST00000548821 CFAP44Q96MT7 982 aa12.51□□□□□ -0.41
GCN1-205ENST00000548821 CLEC11AQ9Y240 323 aa12.51□□□□□ -0.41
GCN1-205ENST00000548821 PPEF1O14829 653 aaPredicted RBP12.5□□□□□ -0.41
GCN1-205ENST00000548821 PRELPP51888 382 aa12.5□□□□□ -0.41
GCN1-205ENST00000548821 GNAI1P63096 354 aa12.5□□□□□ -0.41
GCN1-205ENST00000548821 AIMP1Q12904 312 aaKnown RBP12.5□□□□□ -0.41
GCN1-205ENST00000548821 TCIRG1Q13488 830 aa12.5□□□□□ -0.41
GCN1-205ENST00000548821 HDGFL1Q5TGJ6 251 aa12.5□□□□□ -0.41
GCN1-205ENST00000548821 LARGE2Q8N3Y3 721 aa12.5□□□□□ -0.41
GCN1-205ENST00000548821 ZNF277Q9NRM2 450 aaPredicted RBP12.5□□□□□ -0.41
GCN1-205ENST00000548821 CREBZFQ9NS37 354 aa12.5□□□□□ -0.41
GCN1-205ENST00000548821 TRMT112Q9UI30 125 aaKnown RBP12.5□□□□□ -0.41
GCN1-205ENST00000548821 ADAMTS8Q9UP79 889 aa12.5□□□□□ -0.41
GCN1-205ENST00000548821 BCORQ6W2J9 1755 aa12.5□□□□□ -0.41
GCN1-205ENST00000548821 SBF1O95248 1867 aa12.5□□□□□ -0.41
GCN1-205ENST00000548821 SH3TC1Q8TE82 1336 aa12.49□□□□□ -0.41
GCN1-205ENST00000548821 FZD9O00144 591 aa12.49□□□□□ -0.41
GCN1-205ENST00000548821 NTSR2O95665 410 aa12.49□□□□□ -0.41
GCN1-205ENST00000548821 ANKRD13DQ6ZTN6 518 aa12.49□□□□□ -0.41
GCN1-205ENST00000548821 NIM1KQ8IY84 436 aa12.49□□□□□ -0.41
GCN1-205ENST00000548821 CCDC146Q8IYE0 955 aa12.49□□□□□ -0.41
GCN1-205ENST00000548821 PLBD2Q8NHP8 589 aa12.49□□□□□ -0.41
GCN1-205ENST00000548821 PRKRIP1Q9H875 184 aaPredicted RBP12.49□□□□□ -0.41
GCN1-205ENST00000548821 CEP350Q5VT06 3117 aa12.48□□□□□ -0.41
GCN1-205ENST00000548821 POTECB2RU33 542 aa12.48□□□□□ -0.41
GCN1-205ENST00000548821 DDX58O95786 925 aaKnown RBP12.48□□□□□ -0.41
GCN1-205ENST00000548821 PDIA6Q15084 440 aa12.48□□□□□ -0.41
GCN1-205ENST00000548821 SP8Q8IXZ3 490 aa12.48□□□□□ -0.41
GCN1-205ENST00000548821 XAGE3Q8WTP9 111 aa12.48□□□□□ -0.41
GCN1-205ENST00000548821 TAF1DQ9H5J8 278 aaPredicted RBP12.48□□□□□ -0.41
GCN1-205ENST00000548821 ATP6V0A2Q9Y487 856 aa12.48□□□□□ -0.41
GCN1-205ENST00000548821 UBN2Q6ZU65 1347 aa12.47□□□□□ -0.41
GCN1-205ENST00000548821 EPHX2P34913 555 aa12.47□□□□□ -0.41
GCN1-205ENST00000548821 GOLGA2Q08379 1002 aa12.47□□□□□ -0.41
GCN1-205ENST00000548821 EAPPQ56P03 285 aaPredicted RBP12.47□□□□□ -0.41
GCN1-205ENST00000548821 IFT57Q9NWB7 429 aa12.47□□□□□ -0.41
GCN1-205ENST00000548821 LAMB4A4D0S4 1761 aa12.47□□□□□ -0.41
GCN1-205ENST00000548821 WDR90Q96KV7 1748 aa12.47□□□□□ -0.41
GCN1-205ENST00000548821 ANKRD31Q8N7Z5 1873 aa12.46□□□□□ -0.41
GCN1-205ENST00000548821 KDM3BQ7LBC6 1761 aa12.46□□□□□ -0.41
GCN1-205ENST00000548821 TNIP1Q15025 636 aa12.46□□□□□ -0.41
GCN1-205ENST00000548821 DPP8Q6V1X1 898 aaPredicted RBP12.46□□□□□ -0.41
GCN1-205ENST00000548821 NLRP10Q86W26 655 aa12.46□□□□□ -0.41
GCN1-205ENST00000548821 MPNDQ8N594 471 aa12.46□□□□□ -0.41
GCN1-205ENST00000548821 TRIM35Q9UPQ4 493 aa12.46□□□□□ -0.41
GCN1-205ENST00000548821 FER1L6Q2WGJ9 1857 aa12.46□□□□□ -0.42
GCN1-205ENST00000548821 TMEM88BA6NKF7 163 aa12.45□□□□□ -0.42
GCN1-205ENST00000548821 PPIP5K2O43314 1243 aa12.45□□□□□ -0.42
GCN1-205ENST00000548821 TRIM28Q13263 835 aaKnown RBP12.45□□□□□ -0.42
GCN1-205ENST00000548821 CCDC30Q5VVM6 783 aa12.45□□□□□ -0.42
GCN1-205ENST00000548821 USP50Q70EL3 339 aaPredicted RBP12.45□□□□□ -0.42
GCN1-205ENST00000548821 RIC3Q7Z5B4 369 aa12.45□□□□□ -0.42
GCN1-205ENST00000548821 NECTIN2Q92692 538 aa12.45□□□□□ -0.42
GCN1-205ENST00000548821 CHPF2Q9P2E5 772 aa12.45□□□□□ -0.42
GCN1-205ENST00000548821 GJA3Q9Y6H8 435 aa12.45□□□□□ -0.42
GCN1-205ENST00000548821 SLX4Q8IY92 1834 aa12.44□□□□□ -0.42
GCN1-205ENST00000548821 TCERG1O14776 1098 aaKnown RBP12.44□□□□□ -0.42
GCN1-205ENST00000548821 GRAPQ13588 217 aa12.44□□□□□ -0.42
GCN1-205ENST00000548821 DUSP27Q5VZP5 1158 aa12.44□□□□□ -0.42
GCN1-205ENST00000548821 LRP10Q7Z4F1 713 aa12.44□□□□□ -0.42
GCN1-205ENST00000548821 GRAPLQ8TC17 118 aaPredicted RBP12.44□□□□□ -0.42
GCN1-205ENST00000548821 EYA3Q99504 573 aa12.44□□□□□ -0.42
GCN1-205ENST00000548821 ZNRF3Q9ULT6 936 aa12.44□□□□□ -0.42
GCN1-205ENST00000548821 ABCC12Q96J65 1359 aa12.43□□□□□ -0.42
GCN1-205ENST00000548821 ARFGEF2Q9Y6D5 1785 aa12.43□□□□□ -0.42
GCN1-205ENST00000548821 TIAM2Q8IVF5 1701 aa12.43□□□□□ -0.42
GCN1-205ENST00000548821 APAF1O14727 1248 aa12.43□□□□□ -0.42
GCN1-205ENST00000548821 NCBP3Q53F19 620 aaKnown RBP12.43□□□□□ -0.42
GCN1-205ENST00000548821 CNTROBQ8N137 903 aa12.43□□□□□ -0.42
GCN1-205ENST00000548821 AIDAQ96BJ3 306 aa12.43□□□□□ -0.42
GCN1-205ENST00000548821 STK31Q9BXU1 1019 aa12.43□□□□□ -0.42
GCN1-205ENST00000548821 RTFDC1Q9BY42 306 aaPredicted RBP12.43□□□□□ -0.42
GCN1-205ENST00000548821 DLG5Q8TDM6 1919 aa12.43□□□□□ -0.42
GCN1-205ENST00000548821 DICER1Q9UPY3 1922 aaKnown RBP12.43□□□□□ -0.42
GCN1-205ENST00000548821 COL11A2P13942 1736 aaPredicted RBP12.42□□□□□ -0.42
GCN1-205ENST00000548821 CDHR2Q9BYE9 1310 aa12.42□□□□□ -0.42
GCN1-205ENST00000548821 ANXA1P04083 346 aa12.42□□□□□ -0.42
GCN1-205ENST00000548821 HTRA3P83110 453 aa12.42□□□□□ -0.42
GCN1-205ENST00000548821 PROSER3Q2NL68 480 aa12.42□□□□□ -0.42
GCN1-205ENST00000548821 MBIPQ9NS73 344 aa12.42□□□□□ -0.42
GCN1-205ENST00000548821 ABCC4O15439 1325 aa12.41□□□□□ -0.42
GCN1-205ENST00000548821 ZNF541Q9H0D2 1346 aa12.41□□□□□ -0.42
GCN1-205ENST00000548821 G3V3G9 751 aa12.41□□□□□ -0.42
GCN1-205ENST00000548821 HCLS1P14317 486 aaPredicted RBP12.41□□□□□ -0.42
GCN1-205ENST00000548821 NEXNQ0ZGT2 675 aa12.41□□□□□ -0.42
GCN1-205ENST00000548821 SF3B3Q15393 1217 aaKnown RBP12.41□□□□□ -0.42
GCN1-205ENST00000548821 DCAF8Q5TAQ9 597 aa12.41□□□□□ -0.42
GCN1-205ENST00000548821 CIAPIN1Q6FI81 312 aa12.41□□□□□ -0.42
GCN1-205ENST00000548821 OLFM4Q6UX06 510 aa12.41□□□□□ -0.42
GCN1-205ENST00000548821 CCDC191Q8NCU4 936 aa12.41□□□□□ -0.42
GCN1-205ENST00000548821 ISCA1Q9BUE6 129 aa12.41□□□□□ -0.42
GCN1-205ENST00000548821 BCL2L13Q9BXK5 485 aa12.41□□□□□ -0.42
GCN1-205ENST00000548821 ADARB2Q9NS39 739 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms