RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 LGR6Q9HBX8 967 aa11.41□□□□□ -0.58
TROAP-208ENST00000548817 GPRC5DQ9NZD1 345 aa11.41□□□□□ -0.58
TROAP-208ENST00000548817 ZNF652Q9Y2D9 606 aa11.41□□□□□ -0.58
TROAP-208ENST00000548817 AKAP11Q9UKA4 1901 aa11.41□□□□□ -0.58
TROAP-208ENST00000548817 HEG1Q9ULI3 1381 aa11.41□□□□□ -0.58
TROAP-208ENST00000548817 OLFM4Q6UX06 510 aa11.4□□□□□ -0.58
TROAP-208ENST00000548817 TPTE2Q6XPS3 522 aa11.4□□□□□ -0.58
TROAP-208ENST00000548817 CDC37L1Q7L3B6 337 aa11.4□□□□□ -0.58
TROAP-208ENST00000548817 CCDC102AQ96A19 550 aa11.4□□□□□ -0.58
TROAP-208ENST00000548817 HUNKP57058 714 aa11.39□□□□□ -0.59
TROAP-208ENST00000548817 AMER1Q5JTC6 1135 aaPredicted RBP11.39□□□□□ -0.59
TROAP-208ENST00000548817 CC2D1BQ5T0F9 858 aaKnown RBP11.39□□□□□ -0.59
TROAP-208ENST00000548817 REM2Q8IYK8 340 aaPredicted RBP11.39□□□□□ -0.59
TROAP-208ENST00000548817 LARGE2Q8N3Y3 721 aa11.39□□□□□ -0.59
TROAP-208ENST00000548817 GLIS2Q9BZE0 524 aaPredicted RBP11.39□□□□□ -0.59
TROAP-208ENST00000548817 HPS5Q9UPZ3 1129 aa11.39□□□□□ -0.59
TROAP-208ENST00000548817 ZNF330Q9Y3S2 320 aaPredicted RBP11.39□□□□□ -0.59
TROAP-208ENST00000548817 TEFQ10587 303 aa11.38□□□□□ -0.59
TROAP-208ENST00000548817 CNGB1Q14028 1251 aaPredicted RBP11.38□□□□□ -0.59
TROAP-208ENST00000548817 MTHFSDQ2M296 383 aaKnown RBP11.38□□□□□ -0.59
TROAP-208ENST00000548817 DZIP3Q86Y13 1208 aaKnown RBP11.38□□□□□ -0.59
TROAP-208ENST00000548817 NIM1KQ8IY84 436 aa11.38□□□□□ -0.59
TROAP-208ENST00000548817 ZIC5Q96T25 663 aa11.38□□□□□ -0.59
TROAP-208ENST00000548817 VPS33BQ9H267 617 aa11.38□□□□□ -0.59
TROAP-208ENST00000548817 FAM155AB1AL88 458 aaPredicted RBP11.37□□□□□ -0.59
TROAP-208ENST00000548817 U2SURPO15042 1029 aaKnown RBP11.37□□□□□ -0.59
TROAP-208ENST00000548817 CRY2Q49AN0 593 aa11.37□□□□□ -0.59
TROAP-208ENST00000548817 RGMBQ6NW40 437 aa11.37□□□□□ -0.59
TROAP-208ENST00000548817 ZNF496Q96IT1 587 aaPredicted RBP11.37□□□□□ -0.59
TROAP-208ENST00000548817 ZNF408Q9H9D4 720 aa11.37□□□□□ -0.59
TROAP-208ENST00000548817 RNF186Q9NXI6 227 aa11.37□□□□□ -0.59
TROAP-208ENST00000548817 KIF7Q2M1P5 1343 aa11.36□□□□□ -0.59
TROAP-208ENST00000548817 RIC1Q4ADV7 1423 aa11.36□□□□□ -0.59
TROAP-208ENST00000548817 TRPA1O75762 1119 aa11.36□□□□□ -0.59
TROAP-208ENST00000548817 KIF23Q02241 960 aaPredicted RBP11.36□□□□□ -0.59
TROAP-208ENST00000548817 ZNF790Q6PG37 636 aa11.36□□□□□ -0.59
TROAP-208ENST00000548817 NPC1L1Q9UHC9 1359 aa11.36□□□□□ -0.59
TROAP-208ENST00000548817 CUL9Q8IWT3 2517 aa11.35□□□□□ -0.59
TROAP-208ENST00000548817 GNAT3A8MTJ3 354 aa11.35□□□□□ -0.59
TROAP-208ENST00000548817 HOXA10P31260 410 aaPredicted RBP11.35□□□□□ -0.59
TROAP-208ENST00000548817 FXR1P51114 621 aaKnown RBP eCLIP11.35□□□□□ -0.59
TROAP-208ENST00000548817 GAS2L2Q8NHY3 880 aa11.35□□□□□ -0.59
TROAP-208ENST00000548817 FMNL2Q96PY5 1086 aa11.35□□□□□ -0.59
TROAP-208ENST00000548817 SIPA1L3O60292 1781 aaPredicted RBP11.34□□□□□ -0.59
TROAP-208ENST00000548817 A1BGP04217 495 aa11.34□□□□□ -0.59
TROAP-208ENST00000548817 GMPSP49915 693 aaPredicted RBP11.34□□□□□ -0.59
TROAP-208ENST00000548817 C2orf69Q8N8R5 385 aa11.34□□□□□ -0.59
TROAP-208ENST00000548817 CFAP53Q96M91 514 aa11.34□□□□□ -0.59
TROAP-208ENST00000548817 ZNRF3Q9ULT6 936 aa11.34□□□□□ -0.59
TROAP-208ENST00000548817 PPIP5K2O43314 1243 aa11.33□□□□□ -0.6
TROAP-208ENST00000548817 CXCL9Q07325 125 aa11.33□□□□□ -0.6
TROAP-208ENST00000548817 NOM1Q5C9Z4 860 aaKnown RBP11.33□□□□□ -0.6
TROAP-208ENST00000548817 GBA2Q9HCG7 927 aaPredicted RBP11.33□□□□□ -0.6
TROAP-208ENST00000548817 NIP7Q9Y221 180 aaKnown RBP eCLIP11.33□□□□□ -0.6
TROAP-208ENST00000548817 PER1O15534 1290 aaPredicted RBP11.32□□□□□ -0.6
TROAP-208ENST00000548817 SLC10A3P09131 477 aa11.32□□□□□ -0.6
TROAP-208ENST00000548817 GTF2E1P29083 439 aaPredicted RBP11.32□□□□□ -0.6
TROAP-208ENST00000548817 ZNF157P51786 506 aaPredicted RBP11.32□□□□□ -0.6
TROAP-208ENST00000548817 FBXO46Q6PJ61 603 aaPredicted RBP11.32□□□□□ -0.6
TROAP-208ENST00000548817 SUPT20HQ8NEM7 779 aa11.32□□□□□ -0.6
TROAP-208ENST00000548817 CRAMP1Q96RY5 1269 aa11.32□□□□□ -0.6
TROAP-208ENST00000548817 CSRNP1Q96S65 589 aa11.32□□□□□ -0.6
TROAP-208ENST00000548817 NYXQ9GZU5 481 aa11.32□□□□□ -0.6
TROAP-208ENST00000548817 HDAC9Q9UKV0 1011 aa11.32□□□□□ -0.6
TROAP-208ENST00000548817 NUDCQ9Y266 331 aa11.32□□□□□ -0.6
TROAP-208ENST00000548817 IBTKQ9P2D0 1353 aaPredicted RBP11.31□□□□□ -0.6
TROAP-208ENST00000548817 HIRAP54198 1017 aaPredicted RBP11.31□□□□□ -0.6
TROAP-208ENST00000548817 TNIP1Q15025 636 aa11.31□□□□□ -0.6
TROAP-208ENST00000548817 USP48Q86UV5 1035 aa11.31□□□□□ -0.6
TROAP-208ENST00000548817 RPGRQ92834 1020 aaKnown RBP11.31□□□□□ -0.6
TROAP-208ENST00000548817 BCL2L13Q9BXK5 485 aa11.31□□□□□ -0.6
TROAP-208ENST00000548817 TMX4Q9H1E5 349 aaPredicted RBP11.31□□□□□ -0.6
TROAP-208ENST00000548817 BTBD11A6QL63 1104 aa11.3□□□□□ -0.6
TROAP-208ENST00000548817 H7C1D1 291 aa11.3□□□□□ -0.6
TROAP-208ENST00000548817 PPEF1O14829 653 aaPredicted RBP11.3□□□□□ -0.6
TROAP-208ENST00000548817 IL17REQ8NFR9 667 aa11.3□□□□□ -0.6
TROAP-208ENST00000548817 TRPM4Q8TD43 1214 aa11.3□□□□□ -0.6
TROAP-208ENST00000548817 RTF1Q92541 710 aaKnown RBP11.3□□□□□ -0.6
TROAP-208ENST00000548817 ABCC12Q96J65 1359 aa11.29□□□□□ -0.6
TROAP-208ENST00000548817 RBBP6Q7Z6E9 1792 aaKnown RBP11.29□□□□□ -0.6
TROAP-208ENST00000548817 MKI67P46013 3256 aaKnown RBP11.29□□□□□ -0.6
TROAP-208ENST00000548817 AOC3Q16853 763 aa11.29□□□□□ -0.6
TROAP-208ENST00000548817 INTS3Q68E01 1043 aaKnown RBP11.29□□□□□ -0.6
TROAP-208ENST00000548817 KRT26Q7Z3Y9 468 aa11.29□□□□□ -0.6
TROAP-208ENST00000548817 RBM17Q96I25 401 aaKnown RBP11.29□□□□□ -0.6
TROAP-208ENST00000548817 RTFDC1Q9BY42 306 aaPredicted RBP11.29□□□□□ -0.6
TROAP-208ENST00000548817 DLL1O00548 723 aa11.28□□□□□ -0.6
TROAP-208ENST00000548817 ZNF296Q8WUU4 475 aaPredicted RBP11.28□□□□□ -0.6
TROAP-208ENST00000548817 DPF2Q92785 391 aa11.28□□□□□ -0.6
TROAP-208ENST00000548817 CNOT7Q9UIV1 285 aaKnown RBP11.28□□□□□ -0.6
TROAP-208ENST00000548817 ATP6V0A2Q9Y487 856 aa11.28□□□□□ -0.6
TROAP-208ENST00000548817 FAM177BA6PVY3 158 aa11.27□□□□□ -0.61
TROAP-208ENST00000548817 NEFMP07197 916 aa11.27□□□□□ -0.61
TROAP-208ENST00000548817 PRKAR2BP31323 418 aa11.27□□□□□ -0.61
TROAP-208ENST00000548817 FKBP1BP68106 108 aa11.27□□□□□ -0.61
TROAP-208ENST00000548817 KIAA2012Q0VF49 1180 aa11.27□□□□□ -0.61
TROAP-208ENST00000548817 TRIOBPQ9H2D6 2365 aa11.27□□□□□ -0.61
TROAP-208ENST00000548817 CEP290O15078 2479 aa11.27□□□□□ -0.61
TROAP-208ENST00000548817 CEMIPQ8WUJ3 1361 aa11.27□□□□□ -0.61
TROAP-208ENST00000548817 U2AF1L5P0DN76 240 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms