RNA–Protein interactions for RNA: ENST00000548116.5

SMPDL3B-205, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 2

Gene SMPDL3B, Length 1,913 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-205ENST00000548116 HSP90AB3PQ58FF7 597 aa16.82■□□□□ 0.28
SMPDL3B-205ENST00000548116 RTL5Q5HYW3 569 aaPredicted RBP16.82■□□□□ 0.28
SMPDL3B-205ENST00000548116 LY75O60449 1722 aa16.82■□□□□ 0.28
SMPDL3B-205ENST00000548116 NLRP10Q86W26 655 aa16.82■□□□□ 0.28
SMPDL3B-205ENST00000548116 CAMTA2O94983 1202 aa16.81■□□□□ 0.28
SMPDL3B-205ENST00000548116 PCCAP05165 728 aaPredicted RBP16.81■□□□□ 0.28
SMPDL3B-205ENST00000548116 GPTP24298 496 aa16.81■□□□□ 0.28
SMPDL3B-205ENST00000548116 KLHDC4Q8TBB5 520 aa16.81■□□□□ 0.28
SMPDL3B-205ENST00000548116 CNTNAP4Q9C0A0 1308 aa16.81■□□□□ 0.28
SMPDL3B-205ENST00000548116 ZNF772Q68DY9 489 aaPredicted RBP16.8■□□□□ 0.28
SMPDL3B-205ENST00000548116 LMBR1LQ6UX01 489 aa16.8■□□□□ 0.28
SMPDL3B-205ENST00000548116 KRT27Q7Z3Y8 459 aa16.8■□□□□ 0.28
SMPDL3B-205ENST00000548116 NPM2Q86SE8 214 aaKnown RBP16.8■□□□□ 0.28
SMPDL3B-205ENST00000548116 ZNF34Q8IZ26 560 aa16.8■□□□□ 0.28
SMPDL3B-205ENST00000548116 BCL11BQ9C0K0 894 aaPredicted RBP16.8■□□□□ 0.28
SMPDL3B-205ENST00000548116 COPRSQ9NQ92 184 aa16.8■□□□□ 0.28
SMPDL3B-205ENST00000548116 STAP2Q9UGK3 403 aa16.8■□□□□ 0.28
SMPDL3B-205ENST00000548116 MX1P20591 662 aa16.8■□□□□ 0.28
SMPDL3B-205ENST00000548116 PTPN12Q05209 780 aaKnown RBP16.8■□□□□ 0.28
SMPDL3B-205ENST00000548116 ZBTB38Q8NAP3 1195 aaPredicted RBP16.8■□□□□ 0.28
SMPDL3B-205ENST00000548116 UBN2Q6ZU65 1347 aa16.79■□□□□ 0.28
SMPDL3B-205ENST00000548116 TUBGCP6Q96RT7 1819 aa16.79■□□□□ 0.28
SMPDL3B-205ENST00000548116 SASH1O94885 1247 aa16.79■□□□□ 0.28
SMPDL3B-205ENST00000548116 RBM6P78332 1123 aaKnown RBP16.79■□□□□ 0.28
SMPDL3B-205ENST00000548116 OS9Q13438 667 aaPredicted RBP16.79■□□□□ 0.28
SMPDL3B-205ENST00000548116 TSHZ3Q63HK5 1081 aa16.79■□□□□ 0.28
SMPDL3B-205ENST00000548116 ERC1Q8IUD2 1116 aa16.79■□□□□ 0.28
SMPDL3B-205ENST00000548116 FAM89AQ96GI7 184 aa16.79■□□□□ 0.28
SMPDL3B-205ENST00000548116 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.79■□□□□ 0.28
SMPDL3B-205ENST00000548116 RC3H1Q5TC82 1133 aaKnown RBP16.78■□□□□ 0.28
SMPDL3B-205ENST00000548116 NUTM1Q86Y26 1132 aa16.78■□□□□ 0.28
SMPDL3B-205ENST00000548116 PLA2G12BQ9BX93 195 aa16.78■□□□□ 0.28
SMPDL3B-205ENST00000548116 CCNL1Q9UK58 526 aaPredicted RBP16.78■□□□□ 0.28
SMPDL3B-205ENST00000548116 TAF1LQ8IZX4 1826 aa16.78■□□□□ 0.28
SMPDL3B-205ENST00000548116 BCORQ6W2J9 1755 aa16.78■□□□□ 0.28
SMPDL3B-205ENST00000548116 G3BP1Q13283 466 aaKnown RBP eCLIP16.78■□□□□ 0.28
SMPDL3B-205ENST00000548116 FAM196AQ6ZSG2 479 aa16.78■□□□□ 0.28
SMPDL3B-205ENST00000548116 SYNE4Q8N205 404 aa16.78■□□□□ 0.28
SMPDL3B-205ENST00000548116 CDHR2Q9BYE9 1310 aa16.77■□□□□ 0.28
SMPDL3B-205ENST00000548116 SDSP20132 328 aa16.77■□□□□ 0.28
SMPDL3B-205ENST00000548116 SIL1Q9H173 461 aa16.77■□□□□ 0.28
SMPDL3B-205ENST00000548116 AOX1Q06278 1338 aa16.76■□□□□ 0.27
SMPDL3B-205ENST00000548116 ANP32AP39687 249 aaKnown RBP16.76■□□□□ 0.27
SMPDL3B-205ENST00000548116 TBC1D9Q6ZT07 1266 aa16.76■□□□□ 0.27
SMPDL3B-205ENST00000548116 CLASRPQ8N2M8 674 aaKnown RBP16.75■□□□□ 0.27
SMPDL3B-205ENST00000548116 USP42Q9H9J4 1324 aaKnown RBP16.75■□□□□ 0.27
SMPDL3B-205ENST00000548116 EP400Q96L91 3159 aa16.75■□□□□ 0.27
SMPDL3B-205ENST00000548116 CDC45O75419 566 aa16.74■□□□□ 0.27
SMPDL3B-205ENST00000548116 RPS6KA4O75676 772 aa16.74■□□□□ 0.27
SMPDL3B-205ENST00000548116 CSF1RP07333 972 aa16.74■□□□□ 0.27
SMPDL3B-205ENST00000548116 SMIM5Q71RC9 77 aa16.74■□□□□ 0.27
SMPDL3B-205ENST00000548116 TRMT112Q9UI30 125 aaKnown RBP16.74■□□□□ 0.27
SMPDL3B-205ENST00000548116 CHMP3Q9Y3E7 222 aa16.74■□□□□ 0.27
SMPDL3B-205ENST00000548116 SUSD4Q5VX71 490 aa16.74■□□□□ 0.27
SMPDL3B-205ENST00000548116 PI4K2BQ8TCG2 481 aa16.74■□□□□ 0.27
SMPDL3B-205ENST00000548116 EAF2Q96CJ1 260 aaPredicted RBP16.74■□□□□ 0.27
SMPDL3B-205ENST00000548116 AMIGO3Q86WK7 504 aa16.73■□□□□ 0.27
SMPDL3B-205ENST00000548116 LRRC4BQ9NT99 713 aa16.73■□□□□ 0.27
SMPDL3B-205ENST00000548116 SCN7AQ01118 1682 aa16.73■□□□□ 0.27
SMPDL3B-205ENST00000548116 C4BP0C0L5 1744 aa16.73■□□□□ 0.27
SMPDL3B-205ENST00000548116 CLEC4GQ6UXB4 293 aa16.72■□□□□ 0.27
SMPDL3B-205ENST00000548116 ATG9AQ7Z3C6 839 aa16.72■□□□□ 0.27
SMPDL3B-205ENST00000548116 MYH3P11055 1940 aa16.72■□□□□ 0.27
SMPDL3B-205ENST00000548116 IRS4O14654 1257 aaPredicted RBP16.72■□□□□ 0.27
SMPDL3B-205ENST00000548116 GNPATO15228 680 aa16.72■□□□□ 0.27
SMPDL3B-205ENST00000548116 TRIM37O94972 964 aa16.72■□□□□ 0.27
SMPDL3B-205ENST00000548116 MFAP1P55081 439 aaKnown RBP16.72■□□□□ 0.27
SMPDL3B-205ENST00000548116 PARP10Q53GL7 1025 aa16.72■□□□□ 0.27
SMPDL3B-205ENST00000548116 AACSQ86V21 672 aa16.72■□□□□ 0.27
SMPDL3B-205ENST00000548116 ZNF594Q96JF6 807 aaPredicted RBP16.72■□□□□ 0.27
SMPDL3B-205ENST00000548116 TBC1D32Q96NH3 1257 aa16.72■□□□□ 0.27
SMPDL3B-205ENST00000548116 BCL2L12Q9HB09 334 aa16.72■□□□□ 0.27
SMPDL3B-205ENST00000548116 RGS17Q9UGC6 210 aaPredicted RBP16.72■□□□□ 0.27
SMPDL3B-205ENST00000548116 TTC41PQ6P2S7 1318 aa16.71■□□□□ 0.27
SMPDL3B-205ENST00000548116 RGL2O15211 777 aa16.71■□□□□ 0.27
SMPDL3B-205ENST00000548116 TFCP2Q12800 502 aa16.71■□□□□ 0.27
SMPDL3B-205ENST00000548116 TTLL11Q8NHH1 800 aa16.71■□□□□ 0.27
SMPDL3B-205ENST00000548116 NIP7Q9Y221 180 aaKnown RBP eCLIP16.71■□□□□ 0.27
SMPDL3B-205ENST00000548116 IFIT2P09913 472 aaKnown RBP16.7■□□□□ 0.26
SMPDL3B-205ENST00000548116 UTP14AQ9BVJ6 771 aaKnown RBP16.7■□□□□ 0.26
SMPDL3B-205ENST00000548116 ZNF652Q9Y2D9 606 aa16.7■□□□□ 0.26
SMPDL3B-205ENST00000548116 PDE8AO60658 829 aa16.7■□□□□ 0.26
SMPDL3B-205ENST00000548116 NTSR2O95665 410 aa16.7■□□□□ 0.26
SMPDL3B-205ENST00000548116 RXRBP28702 533 aa16.7■□□□□ 0.26
SMPDL3B-205ENST00000548116 CTSWP56202 376 aa16.7■□□□□ 0.26
SMPDL3B-205ENST00000548116 IPO9Q96P70 1041 aaKnown RBP16.7■□□□□ 0.26
SMPDL3B-205ENST00000548116 UPF2Q9HAU5 1272 aaKnown RBP16.7■□□□□ 0.26
SMPDL3B-205ENST00000548116 TLR7Q9NYK1 1049 aaKnown RBP16.7■□□□□ 0.26
SMPDL3B-205ENST00000548116 NARFQ9UHQ1 456 aa16.7■□□□□ 0.26
SMPDL3B-205ENST00000548116 SH3TC1Q8TE82 1336 aa16.69■□□□□ 0.26
SMPDL3B-205ENST00000548116 EYA2O00167 538 aa16.69■□□□□ 0.26
SMPDL3B-205ENST00000548116 CCDC57Q2TAC2 916 aa16.69■□□□□ 0.26
SMPDL3B-205ENST00000548116 LRRC24Q50LG9 513 aa16.69■□□□□ 0.26
SMPDL3B-205ENST00000548116 FBXO41Q8TF61 875 aa16.69■□□□□ 0.26
SMPDL3B-205ENST00000548116 CCDC85AQ96PX6 553 aaPredicted RBP16.69■□□□□ 0.26
SMPDL3B-205ENST00000548116 CCDC8Q9H0W5 538 aaPredicted RBP16.69■□□□□ 0.26
SMPDL3B-205ENST00000548116 RTCBQ9Y3I0 505 aaKnown RBP16.69■□□□□ 0.26
SMPDL3B-205ENST00000548116 MSH5O43196 834 aa16.68■□□□□ 0.26
SMPDL3B-205ENST00000548116 CIAO1O76071 339 aa16.68■□□□□ 0.26
SMPDL3B-205ENST00000548116 TNNI3KQ59H18 835 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms