RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 PRPF40BQ6NWY9 871 aaKnown RBP18.7■□□□□ 0.58
BRF1-212ENST00000547562 RUFY3Q7L099 469 aa18.7■□□□□ 0.58
BRF1-212ENST00000547562 UBR2Q8IWV8 1755 aa18.69■□□□□ 0.58
BRF1-212ENST00000547562 RFX5P48382 616 aaPredicted RBP18.69■□□□□ 0.58
BRF1-212ENST00000547562 RABL6Q3YEC7 729 aaPredicted RBP18.69■□□□□ 0.58
BRF1-212ENST00000547562 UBE3BQ7Z3V4 1068 aa18.69■□□□□ 0.58
BRF1-212ENST00000547562 PLBD2Q8NHP8 589 aa18.69■□□□□ 0.58
BRF1-212ENST00000547562 TCHHQ07283 1943 aa18.69■□□□□ 0.58
BRF1-212ENST00000547562 PCDH11XQ9BZA7 1347 aa18.69■□□□□ 0.58
BRF1-212ENST00000547562 PCDH11YQ9BZA8 1340 aa18.69■□□□□ 0.58
BRF1-212ENST00000547562 WDR33Q9C0J8 1336 aaKnown RBP18.69■□□□□ 0.58
BRF1-212ENST00000547562 NMIQ13287 307 aaPredicted RBP18.69■□□□□ 0.58
BRF1-212ENST00000547562 NECTIN1Q15223 517 aa18.69■□□□□ 0.58
BRF1-212ENST00000547562 FAM227BQ96M60 508 aa18.69■□□□□ 0.58
BRF1-212ENST00000547562 TM6SF1Q9BZW5 370 aa18.69■□□□□ 0.58
BRF1-212ENST00000547562 BOLA2Q9H3K6 86 aa18.69■□□□□ 0.58
BRF1-212ENST00000547562 PRDM11Q9NQV5 511 aa18.69■□□□□ 0.58
BRF1-212ENST00000547562 SNRKQ9NRH2 765 aa18.69■□□□□ 0.58
BRF1-212ENST00000547562 JARID2Q92833 1246 aaPredicted RBP18.68■□□□□ 0.58
BRF1-212ENST00000547562 ERBB4Q15303 1308 aa18.68■□□□□ 0.58
BRF1-212ENST00000547562 NASPP49321 788 aaPredicted RBP18.68■□□□□ 0.58
BRF1-212ENST00000547562 PTPN12Q05209 780 aaKnown RBP18.68■□□□□ 0.58
BRF1-212ENST00000547562 ZCRB1Q8TBF4 217 aaKnown RBP18.68■□□□□ 0.58
BRF1-212ENST00000547562 JAKMIP1Q96N16 626 aaKnown RBP18.68■□□□□ 0.58
BRF1-212ENST00000547562 RPAP1Q9BWH6 1393 aaPredicted RBP18.67■□□□□ 0.58
BRF1-212ENST00000547562 A0A087WZG4 1122 aa18.67■□□□□ 0.58
BRF1-212ENST00000547562 ATP5J2-PTCD1G3V325 749 aa18.67■□□□□ 0.58
BRF1-212ENST00000547562 PTCD1O75127 700 aaKnown RBP18.67■□□□□ 0.58
BRF1-212ENST00000547562 MBD3O95983 291 aa18.67■□□□□ 0.58
BRF1-212ENST00000547562 CPA1P15085 419 aa18.67■□□□□ 0.58
BRF1-212ENST00000547562 ADCK5Q3MIX3 580 aa18.67■□□□□ 0.58
BRF1-212ENST00000547562 VPS53Q5VIR6 699 aa18.67■□□□□ 0.58
BRF1-212ENST00000547562 TOM1L2Q6ZVM7 507 aa18.67■□□□□ 0.58
BRF1-212ENST00000547562 ZSWIM6Q9HCJ5 1215 aa18.67■□□□□ 0.58
BRF1-212ENST00000547562 MAP4K1Q92918 833 aa18.66■□□□□ 0.58
BRF1-212ENST00000547562 FSD1Q9BTV5 496 aa18.66■□□□□ 0.58
BRF1-212ENST00000547562 RBM27Q9P2N5 1060 aaKnown RBP18.66■□□□□ 0.58
BRF1-212ENST00000547562 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.66■□□□□ 0.58
BRF1-212ENST00000547562 RBM8AQ9Y5S9 174 aaKnown RBP18.66■□□□□ 0.58
BRF1-212ENST00000547562 NUP188Q5SRE5 1749 aa18.66■□□□□ 0.58
BRF1-212ENST00000547562 ZKSCAN1P17029 563 aaPredicted RBP18.66■□□□□ 0.58
BRF1-212ENST00000547562 CASP7P55210 303 aa18.66■□□□□ 0.58
BRF1-212ENST00000547562 CYP46A1Q9Y6A2 500 aa18.66■□□□□ 0.58
BRF1-212ENST00000547562 COL5A2P05997 1499 aaPredicted RBP18.66■□□□□ 0.58
BRF1-212ENST00000547562 LARP6Q9BRS8 491 aaKnown RBP18.65■□□□□ 0.58
BRF1-212ENST00000547562 PDRG1Q9NUG6 133 aa18.65■□□□□ 0.58
BRF1-212ENST00000547562 TMEM63CQ9P1W3 806 aa18.65■□□□□ 0.58
BRF1-212ENST00000547562 NSFL1CQ9UNZ2 370 aaKnown RBP18.65■□□□□ 0.58
BRF1-212ENST00000547562 PAPPAQ13219 1627 aa18.65■□□□□ 0.58
BRF1-212ENST00000547562 A0A0D9SFI3 127 aa18.65■□□□□ 0.58
BRF1-212ENST00000547562 NBPF26B4DH59 902 aa18.65■□□□□ 0.58
BRF1-212ENST00000547562 ERVV-2B6SEH9 535 aa18.65■□□□□ 0.58
BRF1-212ENST00000547562 TNNI3KQ59H18 835 aa18.65■□□□□ 0.58
BRF1-212ENST00000547562 NBPF14Q5TI25 921 aa18.65■□□□□ 0.58
BRF1-212ENST00000547562 CREB3L3Q68CJ9 461 aa18.65■□□□□ 0.58
BRF1-212ENST00000547562 NBPF10Q6P3W6 841 aaKnown RBP18.65■□□□□ 0.58
BRF1-212ENST00000547562 NBPF15Q8N660 670 aa18.65■□□□□ 0.58
BRF1-212ENST00000547562 FPGT-TNNI3KV9GXZ4 949 aa18.65■□□□□ 0.58
BRF1-212ENST00000547562 DBNLQ9UJU6 430 aaKnown RBP18.64■□□□□ 0.58
BRF1-212ENST00000547562 SOS2Q07890 1332 aaPredicted RBP18.64■□□□□ 0.58
BRF1-212ENST00000547562 MED23Q9ULK4 1368 aa18.64■□□□□ 0.58
BRF1-212ENST00000547562 ABCA3Q99758 1704 aa18.64■□□□□ 0.57
BRF1-212ENST00000547562 SHANK3Q9BYB0 1731 aa18.64■□□□□ 0.57
BRF1-212ENST00000547562 ATP5JP18859 108 aa18.64■□□□□ 0.57
BRF1-212ENST00000547562 KCNJ4P48050 445 aa18.64■□□□□ 0.57
BRF1-212ENST00000547562 TFCP2Q12800 502 aa18.64■□□□□ 0.57
BRF1-212ENST00000547562 KCPQ6ZWJ8 1503 aa18.64■□□□□ 0.57
BRF1-212ENST00000547562 LARGE1O95461 756 aa18.63■□□□□ 0.57
BRF1-212ENST00000547562 CCDC173Q0VFZ6 552 aa18.63■□□□□ 0.57
BRF1-212ENST00000547562 NKX1-1Q15270 411 aaPredicted RBP18.63■□□□□ 0.57
BRF1-212ENST00000547562 ZSCAN31Q96LW9 406 aaPredicted RBP18.63■□□□□ 0.57
BRF1-212ENST00000547562 PRIM1P49642 420 aaKnown RBP18.62■□□□□ 0.57
BRF1-212ENST00000547562 SH2B1Q9NRF2 756 aaPredicted RBP18.62■□□□□ 0.57
BRF1-212ENST00000547562 SMC3Q9UQE7 1217 aa18.62■□□□□ 0.57
BRF1-212ENST00000547562 TJP1Q07157 1748 aa18.62■□□□□ 0.57
BRF1-212ENST00000547562 JCADQ9P266 1359 aa18.62■□□□□ 0.57
BRF1-212ENST00000547562 SLC27A2O14975 620 aa18.62■□□□□ 0.57
BRF1-212ENST00000547562 TRIM44Q96DX7 344 aaPredicted RBP18.62■□□□□ 0.57
BRF1-212ENST00000547562 PPP1R9BQ96SB3 815 aa18.62■□□□□ 0.57
BRF1-212ENST00000547562 H7C1W4 665 aa18.61■□□□□ 0.57
BRF1-212ENST00000547562 STX6O43752 255 aa18.61■□□□□ 0.57
BRF1-212ENST00000547562 ZSCAN22P10073 491 aaPredicted RBP18.61■□□□□ 0.57
BRF1-212ENST00000547562 IL2RBP14784 551 aa18.61■□□□□ 0.57
BRF1-212ENST00000547562 SYT1P21579 422 aa18.61■□□□□ 0.57
BRF1-212ENST00000547562 ANP32BQ92688 251 aaKnown RBP18.61■□□□□ 0.57
BRF1-212ENST00000547562 SLAIN2Q9P270 581 aa18.61■□□□□ 0.57
BRF1-212ENST00000547562 STRCQ7RTU9 1775 aa18.61■□□□□ 0.57
BRF1-212ENST00000547562 FOXD4L6Q3SYB3 417 aaPredicted RBP18.61■□□□□ 0.57
BRF1-212ENST00000547562 LRSAM1Q6UWE0 723 aa18.61■□□□□ 0.57
BRF1-212ENST00000547562 LMBR1LQ6UX01 489 aa18.61■□□□□ 0.57
BRF1-212ENST00000547562 FOXD4L3Q6VB84 417 aaPredicted RBP18.61■□□□□ 0.57
BRF1-212ENST00000547562 TTLL7Q6ZT98 887 aa18.61■□□□□ 0.57
BRF1-212ENST00000547562 CARD10Q9BWT7 1032 aa18.61■□□□□ 0.57
BRF1-212ENST00000547562 PSMA5P28066 241 aa18.6■□□□□ 0.57
BRF1-212ENST00000547562 FOXO4P98177 505 aa18.6■□□□□ 0.57
BRF1-212ENST00000547562 RNF20Q5VTR2 975 aa18.6■□□□□ 0.57
BRF1-212ENST00000547562 CCDC83Q8IWF9 413 aa18.6■□□□□ 0.57
BRF1-212ENST00000547562 EDC3Q96F86 508 aaKnown RBP18.6■□□□□ 0.57
BRF1-212ENST00000547562 RBSNQ9H1K0 784 aa18.6■□□□□ 0.57
BRF1-212ENST00000547562 SYCE3A1L190 88 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms