RNA–Protein interactions for RNA: ENST00000546537.6

TMEM116-203, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-203ENST00000546537 ZIC5Q96T25 663 aa14.66□□□□□ -0.06
TMEM116-203ENST00000546537 GLIS2Q9BZE0 524 aaPredicted RBP14.66□□□□□ -0.06
TMEM116-203ENST00000546537 PGAP2Q9UHJ9 254 aa14.66□□□□□ -0.06
TMEM116-203ENST00000546537 USP16Q9Y5T5 823 aa14.66□□□□□ -0.06
TMEM116-203ENST00000546537 PIP4K2AP48426 406 aaPredicted RBP14.65□□□□□ -0.06
TMEM116-203ENST00000546537 GRIPAP1Q4V328 841 aa14.65□□□□□ -0.06
TMEM116-203ENST00000546537 AKAP11Q9UKA4 1901 aa14.64□□□□□ -0.07
TMEM116-203ENST00000546537 FAM177BA6PVY3 158 aa14.64□□□□□ -0.07
TMEM116-203ENST00000546537 SAGE1Q9NXZ1 904 aa14.64□□□□□ -0.07
TMEM116-203ENST00000546537 GNAT3A8MTJ3 354 aa14.63□□□□□ -0.07
TMEM116-203ENST00000546537 NIM1KQ8IY84 436 aa14.63□□□□□ -0.07
TMEM116-203ENST00000546537 ZNF408Q9H9D4 720 aa14.63□□□□□ -0.07
TMEM116-203ENST00000546537 KCNQ3O43525 872 aa14.62□□□□□ -0.07
TMEM116-203ENST00000546537 GTF2E1P29083 439 aaPredicted RBP14.62□□□□□ -0.07
TMEM116-203ENST00000546537 ZC3H15Q8WU90 426 aaKnown RBP14.62□□□□□ -0.07
TMEM116-203ENST00000546537 CEMIPQ8WUJ3 1361 aa14.61□□□□□ -0.07
TMEM116-203ENST00000546537 ABCC12Q96J65 1359 aa14.61□□□□□ -0.07
TMEM116-203ENST00000546537 NPC1L1Q9UHC9 1359 aa14.61□□□□□ -0.07
TMEM116-203ENST00000546537 HOXA10P31260 410 aaPredicted RBP14.61□□□□□ -0.07
TMEM116-203ENST00000546537 CDC37L1Q7L3B6 337 aa14.61□□□□□ -0.07
TMEM116-203ENST00000546537 NUP98P52948 1817 aa14.61□□□□□ -0.07
TMEM116-203ENST00000546537 RIC1Q4ADV7 1423 aa14.6□□□□□ -0.07
TMEM116-203ENST00000546537 PRAMEF22A3QJZ6 481 aa14.6□□□□□ -0.07
TMEM116-203ENST00000546537 BTBD11A6QL63 1104 aa14.6□□□□□ -0.07
TMEM116-203ENST00000546537 FAM155AB1AL88 458 aaPredicted RBP14.6□□□□□ -0.07
TMEM116-203ENST00000546537 PPIP5K2O43314 1243 aa14.6□□□□□ -0.07
TMEM116-203ENST00000546537 HIRAP54198 1017 aaPredicted RBP14.6□□□□□ -0.07
TMEM116-203ENST00000546537 HUNKP57058 714 aa14.6□□□□□ -0.07
TMEM116-203ENST00000546537 CXCL9Q07325 125 aa14.6□□□□□ -0.07
TMEM116-203ENST00000546537 HLFQ16534 295 aa14.6□□□□□ -0.07
TMEM116-203ENST00000546537 GAS2L2Q8NHY3 880 aa14.6□□□□□ -0.07
TMEM116-203ENST00000546537 VPS33BQ9H267 617 aa14.6□□□□□ -0.07
TMEM116-203ENST00000546537 KIF7Q2M1P5 1343 aa14.6□□□□□ -0.07
TMEM116-203ENST00000546537 CDHR2Q9BYE9 1310 aa14.6□□□□□ -0.07
TMEM116-203ENST00000546537 NBPF26B4DH59 902 aa14.59□□□□□ -0.07
TMEM116-203ENST00000546537 DIAPH1O60610 1272 aaKnown RBP14.59□□□□□ -0.07
TMEM116-203ENST00000546537 GMPSP49915 693 aaPredicted RBP14.59□□□□□ -0.07
TMEM116-203ENST00000546537 AOC3Q16853 763 aa14.59□□□□□ -0.07
TMEM116-203ENST00000546537 RGMBQ6NW40 437 aa14.59□□□□□ -0.07
TMEM116-203ENST00000546537 NBPF10Q6P3W6 841 aaKnown RBP14.59□□□□□ -0.07
TMEM116-203ENST00000546537 SLC51AQ86UW1 340 aa14.59□□□□□ -0.07
TMEM116-203ENST00000546537 NUTM1Q86Y26 1132 aa14.59□□□□□ -0.07
TMEM116-203ENST00000546537 NBPF15Q8N660 670 aa14.59□□□□□ -0.07
TMEM116-203ENST00000546537 RPGRQ92834 1020 aaKnown RBP14.59□□□□□ -0.07
TMEM116-203ENST00000546537 NYXQ9GZU5 481 aa14.59□□□□□ -0.07
TMEM116-203ENST00000546537 RNF186Q9NXI6 227 aa14.59□□□□□ -0.07
TMEM116-203ENST00000546537 ZNRF3Q9ULT6 936 aa14.59□□□□□ -0.07
TMEM116-203ENST00000546537 CTU1Q7Z7A3 348 aaKnown RBP14.58□□□□□ -0.08
TMEM116-203ENST00000546537 GCC1Q96CN9 775 aa14.58□□□□□ -0.08
TMEM116-203ENST00000546537 CRAMP1Q96RY5 1269 aa14.58□□□□□ -0.08
TMEM116-203ENST00000546537 KNSTRNQ9Y448 316 aa14.58□□□□□ -0.08
TMEM116-203ENST00000546537 POLR2AP24928 1970 aaKnown RBP14.57□□□□□ -0.08
TMEM116-203ENST00000546537 PPEF1O14829 653 aaPredicted RBP14.57□□□□□ -0.08
TMEM116-203ENST00000546537 TRPA1O75762 1119 aa14.57□□□□□ -0.08
TMEM116-203ENST00000546537 SNRPA1P09661 255 aaKnown RBP14.57□□□□□ -0.08
TMEM116-203ENST00000546537 KIF23Q02241 960 aaPredicted RBP14.57□□□□□ -0.08
TMEM116-203ENST00000546537 TCERG1O14776 1098 aaKnown RBP14.56□□□□□ -0.08
TMEM116-203ENST00000546537 AMER1Q5JTC6 1135 aaPredicted RBP14.56□□□□□ -0.08
TMEM116-203ENST00000546537 TRPM4Q8TD43 1214 aa14.56□□□□□ -0.08
TMEM116-203ENST00000546537 CCDC102AQ96A19 550 aa14.56□□□□□ -0.08
TMEM116-203ENST00000546537 RBM17Q96I25 401 aaKnown RBP14.56□□□□□ -0.08
TMEM116-203ENST00000546537 HPS5Q9UPZ3 1129 aa14.56□□□□□ -0.08
TMEM116-203ENST00000546537 LAMB4A4D0S4 1761 aa14.55□□□□□ -0.08
TMEM116-203ENST00000546537 USP48Q86UV5 1035 aa14.55□□□□□ -0.08
TMEM116-203ENST00000546537 BCL2L13Q9BXK5 485 aa14.55□□□□□ -0.08
TMEM116-203ENST00000546537 IBTKQ9P2D0 1353 aaPredicted RBP14.55□□□□□ -0.08
TMEM116-203ENST00000546537 DLK2Q6UY11 383 aa14.54□□□□□ -0.08
TMEM116-203ENST00000546537 SUPT20HQ8NEM7 779 aa14.54□□□□□ -0.08
TMEM116-203ENST00000546537 RTFDC1Q9BY42 306 aaPredicted RBP14.54□□□□□ -0.08
TMEM116-203ENST00000546537 CNOT7Q9UIV1 285 aaKnown RBP14.54□□□□□ -0.08
TMEM116-203ENST00000546537 COL3A1P02461 1466 aaPredicted RBP14.53□□□□□ -0.08
TMEM116-203ENST00000546537 ERVV-1B6SEH8 477 aa14.53□□□□□ -0.08
TMEM116-203ENST00000546537 ZNF157P51786 506 aaPredicted RBP14.53□□□□□ -0.08
TMEM116-203ENST00000546537 TNIP1Q15025 636 aa14.53□□□□□ -0.08
TMEM116-203ENST00000546537 C2orf69Q8N8R5 385 aa14.53□□□□□ -0.08
TMEM116-203ENST00000546537 CSRNP1Q96S65 589 aa14.53□□□□□ -0.08
TMEM116-203ENST00000546537 GBA2Q9HCG7 927 aaPredicted RBP14.53□□□□□ -0.08
TMEM116-203ENST00000546537 ATP6V0A2Q9Y487 856 aa14.53□□□□□ -0.08
TMEM116-203ENST00000546537 SHTN1A0MZ66 631 aa14.52□□□□□ -0.09
TMEM116-203ENST00000546537 RAD17O75943 681 aa14.52□□□□□ -0.09
TMEM116-203ENST00000546537 PKN2Q16513 984 aaKnown RBP14.52□□□□□ -0.09
TMEM116-203ENST00000546537 HABP4Q5JVS0 413 aaKnown RBP14.52□□□□□ -0.09
TMEM116-203ENST00000546537 TMX4Q9H1E5 349 aaPredicted RBP14.52□□□□□ -0.09
TMEM116-203ENST00000546537 UBN2Q6ZU65 1347 aa14.51□□□□□ -0.09
TMEM116-203ENST00000546537 H7C1D1 291 aa14.51□□□□□ -0.09
TMEM116-203ENST00000546537 SLC10A3P09131 477 aa14.51□□□□□ -0.09
TMEM116-203ENST00000546537 KIAA2012Q0VF49 1180 aa14.51□□□□□ -0.09
TMEM116-203ENST00000546537 C3orf67Q6ZVT6 689 aa14.51□□□□□ -0.09
TMEM116-203ENST00000546537 MAP3K15Q6ZN16 1313 aa14.5□□□□□ -0.09
TMEM116-203ENST00000546537 U2SURPO15042 1029 aaKnown RBP14.5□□□□□ -0.09
TMEM116-203ENST00000546537 SUSD4Q5VX71 490 aa14.5□□□□□ -0.09
TMEM116-203ENST00000546537 KRT26Q7Z3Y9 468 aa14.5□□□□□ -0.09
TMEM116-203ENST00000546537 MICALL2Q8IY33 904 aa14.5□□□□□ -0.09
TMEM116-203ENST00000546537 REM2Q8IYK8 340 aaPredicted RBP14.5□□□□□ -0.09
TMEM116-203ENST00000546537 TIMELESSQ9UNS1 1208 aa14.5□□□□□ -0.09
TMEM116-203ENST00000546537 LAMB2P55268 1798 aa14.5□□□□□ -0.09
TMEM116-203ENST00000546537 YDJCA8MPS7 323 aa14.49□□□□□ -0.09
TMEM116-203ENST00000546537 HSPA5P11021 654 aaKnown RBP14.49□□□□□ -0.09
TMEM116-203ENST00000546537 GPTP24298 496 aa14.49□□□□□ -0.09
TMEM116-203ENST00000546537 EIF4G2P78344 907 aaKnown RBP eCLIP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms