RNA–Protein interactions for RNA: ENST00000546433.5

SSH1-203, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 5,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-203ENST00000546433 ADGRL3Q9HAR2 1447 aa12.14□□□□□ -0.47
SSH1-203ENST00000546433 GRIN3BO60391 1043 aa12.14□□□□□ -0.47
SSH1-203ENST00000546433 NUTM1Q86Y26 1132 aa12.14□□□□□ -0.47
SSH1-203ENST00000546433 TANGO6Q9C0B7 1094 aa12.14□□□□□ -0.47
SSH1-203ENST00000546433 ADGRB3O60242 1522 aa12.14□□□□□ -0.47
SSH1-203ENST00000546433 HOXC9P31274 260 aa12.14□□□□□ -0.47
SSH1-203ENST00000546433 EDC4Q6P2E9 1401 aaKnown RBP12.14□□□□□ -0.47
SSH1-203ENST00000546433 POLR3AO14802 1390 aaPredicted RBP12.14□□□□□ -0.47
SSH1-203ENST00000546433 ALDH1B1P30837 517 aa12.14□□□□□ -0.47
SSH1-203ENST00000546433 METTL24Q5JXM2 366 aa12.14□□□□□ -0.47
SSH1-203ENST00000546433 MBD5Q9P267 1494 aa12.14□□□□□ -0.47
SSH1-203ENST00000546433 BRPF3Q9ULD4 1205 aa12.14□□□□□ -0.47
SSH1-203ENST00000546433 EXOC6BQ9Y2D4 811 aa12.14□□□□□ -0.47
SSH1-203ENST00000546433 AXDND1Q5T1B0 1012 aaPredicted RBP12.14□□□□□ -0.47
SSH1-203ENST00000546433 DZIP3Q86Y13 1208 aaKnown RBP12.14□□□□□ -0.47
SSH1-203ENST00000546433 SLC5A1P13866 664 aa12.13□□□□□ -0.47
SSH1-203ENST00000546433 PDCL3Q9H2J4 239 aa12.13□□□□□ -0.47
SSH1-203ENST00000546433 CEP170BQ9Y4F5 1589 aaPredicted RBP12.13□□□□□ -0.47
SSH1-203ENST00000546433 NCOA3Q9Y6Q9 1424 aa12.13□□□□□ -0.47
SSH1-203ENST00000546433 TNNI2P48788 182 aa12.13□□□□□ -0.47
SSH1-203ENST00000546433 MCM10Q7L590 875 aa12.13□□□□□ -0.47
SSH1-203ENST00000546433 ANKRD18AQ8IVF6 992 aa12.13□□□□□ -0.47
SSH1-203ENST00000546433 IDH1O75874 414 aaKnown RBP12.13□□□□□ -0.47
SSH1-203ENST00000546433 NIP7Q9Y221 180 aaKnown RBP eCLIP12.13□□□□□ -0.47
SSH1-203ENST00000546433 PLEKHG3A1L390 1219 aa12.12□□□□□ -0.47
SSH1-203ENST00000546433 CRACR2BQ8N4Y2 399 aaPredicted RBP12.12□□□□□ -0.47
SSH1-203ENST00000546433 ZFYVE9O95405 1425 aa12.12□□□□□ -0.47
SSH1-203ENST00000546433 PLXNC1O60486 1568 aa12.12□□□□□ -0.47
SSH1-203ENST00000546433 CCDC183Q5T5S1 534 aa12.12□□□□□ -0.47
SSH1-203ENST00000546433 SPTY2D1Q68D10 685 aaPredicted RBP12.12□□□□□ -0.47
SSH1-203ENST00000546433 MPHOSPH6Q99547 160 aaKnown RBP12.12□□□□□ -0.47
SSH1-203ENST00000546433 FER1L4A9Z1Z3 1794 aa12.12□□□□□ -0.47
SSH1-203ENST00000546433 ZRSR2Q15696 482 aaKnown RBP12.12□□□□□ -0.47
SSH1-203ENST00000546433 CARD10Q9BWT7 1032 aa12.12□□□□□ -0.47
SSH1-203ENST00000546433 SBNO1A3KN83 1393 aa12.12□□□□□ -0.47
SSH1-203ENST00000546433 CTAGE5O15320 804 aa12.12□□□□□ -0.47
SSH1-203ENST00000546433 IFIT5Q13325 482 aaKnown RBP12.12□□□□□ -0.47
SSH1-203ENST00000546433 TCIRG1Q13488 830 aa12.12□□□□□ -0.47
SSH1-203ENST00000546433 DNAAF4Q8WXU2 420 aa12.12□□□□□ -0.47
SSH1-203ENST00000546433 FAM135BQ49AJ0 1406 aa12.12□□□□□ -0.47
SSH1-203ENST00000546433 LDHCP07864 332 aa12.12□□□□□ -0.47
SSH1-203ENST00000546433 ZHX3Q9H4I2 956 aa12.12□□□□□ -0.47
SSH1-203ENST00000546433 ANO10Q9NW15 660 aa12.12□□□□□ -0.47
SSH1-203ENST00000546433 DBF4Q9UBU7 674 aaPredicted RBP12.12□□□□□ -0.47
SSH1-203ENST00000546433 GJA3Q9Y6H8 435 aa12.12□□□□□ -0.47
SSH1-203ENST00000546433 RALGAPBQ86X10 1494 aa12.11□□□□□ -0.47
SSH1-203ENST00000546433 ZNF804AQ7Z570 1209 aa12.11□□□□□ -0.47
SSH1-203ENST00000546433 PLA2R1Q13018 1463 aa12.11□□□□□ -0.47
SSH1-203ENST00000546433 DIP2CQ9Y2E4 1556 aa12.11□□□□□ -0.47
SSH1-203ENST00000546433 ZMYM4Q5VZL5 1548 aa12.11□□□□□ -0.47
SSH1-203ENST00000546433 GSTO1P78417 241 aa12.11□□□□□ -0.47
SSH1-203ENST00000546433 PRPF40BQ6NWY9 871 aaKnown RBP12.11□□□□□ -0.47
SSH1-203ENST00000546433 ZNF397Q8NF99 534 aaPredicted RBP12.11□□□□□ -0.47
SSH1-203ENST00000546433 ESPNB1AK53 854 aa12.11□□□□□ -0.47
SSH1-203ENST00000546433 NIM1KQ8IY84 436 aa12.11□□□□□ -0.47
SSH1-203ENST00000546433 CWC25Q9NXE8 425 aaPredicted RBP12.11□□□□□ -0.47
SSH1-203ENST00000546433 EPB41L2O43491 1005 aaKnown RBP12.1□□□□□ -0.47
SSH1-203ENST00000546433 PRIM1P49642 420 aaKnown RBP12.1□□□□□ -0.47
SSH1-203ENST00000546433 PDCL2Q8N4E4 241 aa12.1□□□□□ -0.47
SSH1-203ENST00000546433 MADDQ8WXG6 1647 aa12.1□□□□□ -0.47
SSH1-203ENST00000546433 DESP17661 470 aa12.1□□□□□ -0.47
SSH1-203ENST00000546433 MAP3K12Q12852 859 aa12.1□□□□□ -0.47
SSH1-203ENST00000546433 DZIP1Q86YF9 867 aaKnown RBP12.1□□□□□ -0.47
SSH1-203ENST00000546433 MYD88Q99836 296 aa12.1□□□□□ -0.47
SSH1-203ENST00000546433 RNF41Q9H4P4 317 aaPredicted RBP12.1□□□□□ -0.47
SSH1-203ENST00000546433 TNS3Q68CZ2 1445 aa12.1□□□□□ -0.47
SSH1-203ENST00000546433 PARP10Q53GL7 1025 aa12.1□□□□□ -0.47
SSH1-203ENST00000546433 ZSCAN30Q86W11 494 aa12.1□□□□□ -0.47
SSH1-203ENST00000546433 CCDC83Q8IWF9 413 aa12.1□□□□□ -0.47
SSH1-203ENST00000546433 SEC63Q9UGP8 760 aaKnown RBP12.1□□□□□ -0.47
SSH1-203ENST00000546433 SPATA31A3Q5VYP0 1347 aa12.1□□□□□ -0.47
SSH1-203ENST00000546433 ZGPATQ8N5A5 531 aaKnown RBP12.09□□□□□ -0.47
SSH1-203ENST00000546433 VPS72Q15906 364 aa12.09□□□□□ -0.47
SSH1-203ENST00000546433 STK11IPQ8N1F8 1099 aa12.09□□□□□ -0.47
SSH1-203ENST00000546433 EVI5LQ96CN4 794 aa12.09□□□□□ -0.47
SSH1-203ENST00000546433 LIMCH1Q9UPQ0 1083 aa12.09□□□□□ -0.47
SSH1-203ENST00000546433 ZSCAN12O43309 604 aa12.09□□□□□ -0.47
SSH1-203ENST00000546433 PPP1R12BO60237 982 aaPredicted RBP12.09□□□□□ -0.47
SSH1-203ENST00000546433 ZNF76P36508 570 aa12.09□□□□□ -0.47
SSH1-203ENST00000546433 GBP3Q9H0R5 595 aa12.09□□□□□ -0.47
SSH1-203ENST00000546433 SYNMO15061 1565 aa12.09□□□□□ -0.47
SSH1-203ENST00000546433 EIF5P55010 431 aaKnown RBP12.09□□□□□ -0.47
SSH1-203ENST00000546433 CNKSR1Q969H4 720 aa12.09□□□□□ -0.47
SSH1-203ENST00000546433 ANKRD2Q9GZV1 360 aa12.09□□□□□ -0.47
SSH1-203ENST00000546433 ZC3H13Q5T200 1668 aaKnown RBP12.09□□□□□ -0.47
SSH1-203ENST00000546433 ERVV-2B6SEH9 535 aa12.09□□□□□ -0.47
SSH1-203ENST00000546433 CCDC148Q8NFR7 591 aa12.09□□□□□ -0.47
SSH1-203ENST00000546433 THUMPD2Q9BTF0 503 aaKnown RBP12.09□□□□□ -0.47
SSH1-203ENST00000546433 NAPBQ9H115 298 aa12.09□□□□□ -0.47
SSH1-203ENST00000546433 GPTP24298 496 aa12.08□□□□□ -0.48
SSH1-203ENST00000546433 BMP2KLQ5H9B9 411 aa12.08□□□□□ -0.48
SSH1-203ENST00000546433 TSPYL1Q9H0U9 437 aa12.08□□□□□ -0.48
SSH1-203ENST00000546433 UQCRHLA0A096LP55 91 aa12.08□□□□□ -0.48
SSH1-203ENST00000546433 UQCRHP07919 91 aa12.08□□□□□ -0.48
SSH1-203ENST00000546433 SLC27A3Q5K4L6 730 aa12.08□□□□□ -0.48
SSH1-203ENST00000546433 JAKMIP3Q5VZ66 844 aa12.08□□□□□ -0.48
SSH1-203ENST00000546433 TAF4BQ92750 862 aa12.08□□□□□ -0.48
SSH1-203ENST00000546433 ZC3H12CQ9C0D7 883 aaKnown RBP12.08□□□□□ -0.48
SSH1-203ENST00000546433 PRAG1Q86YV5 1406 aa12.08□□□□□ -0.48
SSH1-203ENST00000546433 TET3O43151 1660 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms