RNA–Protein interactions for RNA: ENST00000546272.5

C12orf43-209, Transcript of chromosome 12 open reading frame 43, humanhuman

TSL 2

Gene C12orf43, Length 1,339 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf43-209ENST00000546272 NOGQ13253 232 aa24.04■■□□□ 1.44
C12orf43-209ENST00000546272 LARGE2Q8N3Y3 721 aa24.04■■□□□ 1.44
C12orf43-209ENST00000546272 ADARB2Q9NS39 739 aaKnown RBP24.04■■□□□ 1.44
C12orf43-209ENST00000546272 NIP7Q9Y221 180 aaKnown RBP eCLIP24.03■■□□□ 1.44
C12orf43-209ENST00000546272 KNSTRNQ9Y448 316 aa24.03■■□□□ 1.44
C12orf43-209ENST00000546272 GRIPAP1Q4V328 841 aa24.02■■□□□ 1.44
C12orf43-209ENST00000546272 GPRC5DQ9NZD1 345 aa24.01■■□□□ 1.43
C12orf43-209ENST00000546272 RGL2O15211 777 aa24■■□□□ 1.43
C12orf43-209ENST00000546272 ZEB1P37275 1124 aaPredicted RBP24■■□□□ 1.43
C12orf43-209ENST00000546272 IL17REQ8NFR9 667 aa24■■□□□ 1.43
C12orf43-209ENST00000546272 FAM177BA6PVY3 158 aa23.99■■□□□ 1.43
C12orf43-209ENST00000546272 GTF2E1P29083 439 aaPredicted RBP23.99■■□□□ 1.43
C12orf43-209ENST00000546272 GLIS2Q9BZE0 524 aaPredicted RBP23.99■■□□□ 1.43
C12orf43-209ENST00000546272 PIP4K2AP48426 406 aaPredicted RBP23.98■■□□□ 1.43
C12orf43-209ENST00000546272 CRY2Q49AN0 593 aa23.98■■□□□ 1.43
C12orf43-209ENST00000546272 NIM1KQ8IY84 436 aa23.98■■□□□ 1.43
C12orf43-209ENST00000546272 ZNF408Q9H9D4 720 aa23.98■■□□□ 1.43
C12orf43-209ENST00000546272 PGAP2Q9UHJ9 254 aa23.98■■□□□ 1.43
C12orf43-209ENST00000546272 GNAT3A8MTJ3 354 aa23.97■■□□□ 1.43
C12orf43-209ENST00000546272 PER1O15534 1290 aaPredicted RBP23.97■■□□□ 1.43
C12orf43-209ENST00000546272 ZIC5Q96T25 663 aa23.97■■□□□ 1.43
C12orf43-209ENST00000546272 SAGE1Q9NXZ1 904 aa23.97■■□□□ 1.43
C12orf43-209ENST00000546272 USP16Q9Y5T5 823 aa23.97■■□□□ 1.43
C12orf43-209ENST00000546272 AMER1Q5JTC6 1135 aaPredicted RBP23.95■■□□□ 1.42
C12orf43-209ENST00000546272 ZC3H15Q8WU90 426 aaKnown RBP23.95■■□□□ 1.42
C12orf43-209ENST00000546272 CDC37L1Q7L3B6 337 aa23.93■■□□□ 1.42
C12orf43-209ENST00000546272 RPGRQ92834 1020 aaKnown RBP23.93■■□□□ 1.42
C12orf43-209ENST00000546272 BTBD11A6QL63 1104 aa23.92■■□□□ 1.42
C12orf43-209ENST00000546272 PPIP5K2O43314 1243 aa23.92■■□□□ 1.42
C12orf43-209ENST00000546272 KCNQ3O43525 872 aa23.92■■□□□ 1.42
C12orf43-209ENST00000546272 HUNKP57058 714 aa23.92■■□□□ 1.42
C12orf43-209ENST00000546272 GAS2L2Q8NHY3 880 aa23.92■■□□□ 1.42
C12orf43-209ENST00000546272 NPC1L1Q9UHC9 1359 aa23.91■■□□□ 1.42
C12orf43-209ENST00000546272 AKAP11Q9UKA4 1901 aa23.91■■□□□ 1.42
C12orf43-209ENST00000546272 DIAPH1O60610 1272 aaKnown RBP23.91■■□□□ 1.42
C12orf43-209ENST00000546272 HOXA10P31260 410 aaPredicted RBP23.91■■□□□ 1.42
C12orf43-209ENST00000546272 NYXQ9GZU5 481 aa23.91■■□□□ 1.42
C12orf43-209ENST00000546272 VPS33BQ9H267 617 aa23.91■■□□□ 1.42
C12orf43-209ENST00000546272 CDHR2Q9BYE9 1310 aa23.91■■□□□ 1.42
C12orf43-209ENST00000546272 GCC1Q96CN9 775 aa23.9■■□□□ 1.42
C12orf43-209ENST00000546272 CEMIPQ8WUJ3 1361 aa23.9■■□□□ 1.42
C12orf43-209ENST00000546272 ABCC12Q96J65 1359 aa23.9■■□□□ 1.42
C12orf43-209ENST00000546272 GMPSP49915 693 aaPredicted RBP23.89■■□□□ 1.42
C12orf43-209ENST00000546272 CXCL9Q07325 125 aa23.89■■□□□ 1.42
C12orf43-209ENST00000546272 PRAMEF22A3QJZ6 481 aa23.88■■□□□ 1.41
C12orf43-209ENST00000546272 SNRPA1P09661 255 aaKnown RBP23.88■■□□□ 1.41
C12orf43-209ENST00000546272 HLFQ16534 295 aa23.88■■□□□ 1.41
C12orf43-209ENST00000546272 AOC3Q16853 763 aa23.88■■□□□ 1.41
C12orf43-209ENST00000546272 RGMBQ6NW40 437 aa23.88■■□□□ 1.41
C12orf43-209ENST00000546272 CTU1Q7Z7A3 348 aaKnown RBP23.88■■□□□ 1.41
C12orf43-209ENST00000546272 ZNRF3Q9ULT6 936 aa23.88■■□□□ 1.41
C12orf43-209ENST00000546272 RIC1Q4ADV7 1423 aa23.87■■□□□ 1.41
C12orf43-209ENST00000546272 FAM155AB1AL88 458 aaPredicted RBP23.87■■□□□ 1.41
C12orf43-209ENST00000546272 PPEF1O14829 653 aaPredicted RBP23.87■■□□□ 1.41
C12orf43-209ENST00000546272 TRPA1O75762 1119 aa23.87■■□□□ 1.41
C12orf43-209ENST00000546272 HIRAP54198 1017 aaPredicted RBP23.87■■□□□ 1.41
C12orf43-209ENST00000546272 CC2D1BQ5T0F9 858 aaKnown RBP23.87■■□□□ 1.41
C12orf43-209ENST00000546272 NUTM1Q86Y26 1132 aa23.87■■□□□ 1.41
C12orf43-209ENST00000546272 NBPF15Q8N660 670 aa23.87■■□□□ 1.41
C12orf43-209ENST00000546272 CRAMP1Q96RY5 1269 aa23.87■■□□□ 1.41
C12orf43-209ENST00000546272 NBPF26B4DH59 902 aa23.86■■□□□ 1.41
C12orf43-209ENST00000546272 NBPF10Q6P3W6 841 aaKnown RBP23.86■■□□□ 1.41
C12orf43-209ENST00000546272 CCDC102AQ96A19 550 aa23.86■■□□□ 1.41
C12orf43-209ENST00000546272 RBM17Q96I25 401 aaKnown RBP23.86■■□□□ 1.41
C12orf43-209ENST00000546272 RNF186Q9NXI6 227 aa23.86■■□□□ 1.41
C12orf43-209ENST00000546272 TCERG1O14776 1098 aaKnown RBP23.85■■□□□ 1.41
C12orf43-209ENST00000546272 KIF23Q02241 960 aaPredicted RBP23.85■■□□□ 1.41
C12orf43-209ENST00000546272 BCL2L13Q9BXK5 485 aa23.85■■□□□ 1.41
C12orf43-209ENST00000546272 TMX4Q9H1E5 349 aaPredicted RBP23.85■■□□□ 1.41
C12orf43-209ENST00000546272 CNGB1Q14028 1251 aaPredicted RBP23.84■■□□□ 1.41
C12orf43-209ENST00000546272 USP48Q86UV5 1035 aa23.84■■□□□ 1.41
C12orf43-209ENST00000546272 SLC51AQ86UW1 340 aa23.84■■□□□ 1.41
C12orf43-209ENST00000546272 TRPM4Q8TD43 1214 aa23.84■■□□□ 1.41
C12orf43-209ENST00000546272 TNIP1Q15025 636 aa23.83■■□□□ 1.4
C12orf43-209ENST00000546272 SUPT20HQ8NEM7 779 aa23.83■■□□□ 1.4
C12orf43-209ENST00000546272 HPS5Q9UPZ3 1129 aa23.83■■□□□ 1.4
C12orf43-209ENST00000546272 NUP98P52948 1817 aa23.83■■□□□ 1.4
C12orf43-209ENST00000546272 C2orf69Q8N8R5 385 aa23.82■■□□□ 1.4
C12orf43-209ENST00000546272 GBA2Q9HCG7 927 aaPredicted RBP23.82■■□□□ 1.4
C12orf43-209ENST00000546272 ZNF157P51786 506 aaPredicted RBP23.81■■□□□ 1.4
C12orf43-209ENST00000546272 CNOT7Q9UIV1 285 aaKnown RBP23.81■■□□□ 1.4
C12orf43-209ENST00000546272 IBTKQ9P2D0 1353 aaPredicted RBP23.8■■□□□ 1.4
C12orf43-209ENST00000546272 H7C1D1 291 aa23.8■■□□□ 1.4
C12orf43-209ENST00000546272 PKN2Q16513 984 aaKnown RBP23.8■■□□□ 1.4
C12orf43-209ENST00000546272 RTFDC1Q9BY42 306 aaPredicted RBP23.8■■□□□ 1.4
C12orf43-209ENST00000546272 ATP6V0A2Q9Y487 856 aa23.8■■□□□ 1.4
C12orf43-209ENST00000546272 POLR2AP24928 1970 aaKnown RBP23.79■■□□□ 1.4
C12orf43-209ENST00000546272 ERVV-1B6SEH8 477 aa23.79■■□□□ 1.4
C12orf43-209ENST00000546272 U2SURPO15042 1029 aaKnown RBP23.78■■□□□ 1.4
C12orf43-209ENST00000546272 RAD17O75943 681 aa23.78■■□□□ 1.4
C12orf43-209ENST00000546272 DLK2Q6UY11 383 aa23.78■■□□□ 1.4
C12orf43-209ENST00000546272 CSRNP1Q96S65 589 aa23.78■■□□□ 1.4
C12orf43-209ENST00000546272 HABP4Q5JVS0 413 aaKnown RBP23.77■■□□□ 1.4
C12orf43-209ENST00000546272 KRT26Q7Z3Y9 468 aa23.77■■□□□ 1.4
C12orf43-209ENST00000546272 SLC10A3P09131 477 aa23.76■■□□□ 1.39
C12orf43-209ENST00000546272 KIAA2012Q0VF49 1180 aa23.76■■□□□ 1.39
C12orf43-209ENST00000546272 REM2Q8IYK8 340 aaPredicted RBP23.76■■□□□ 1.39
C12orf43-209ENST00000546272 MICALL2Q8IY33 904 aa23.75■■□□□ 1.39
C12orf43-209ENST00000546272 MAP3K15Q6ZN16 1313 aa23.74■■□□□ 1.39
C12orf43-209ENST00000546272 SHTN1A0MZ66 631 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms