RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 NLRP10Q86W26 655 aa13.62□□□□□ -0.23
PAAF1-216ENST00000546039 CLUAP1Q96AJ1 413 aa13.62□□□□□ -0.23
PAAF1-216ENST00000546039 NYXQ9GZU5 481 aa13.62□□□□□ -0.23
PAAF1-216ENST00000546039 CWC25Q9NXE8 425 aaPredicted RBP13.62□□□□□ -0.23
PAAF1-216ENST00000546039 TNNQ9UQP3 1299 aa13.62□□□□□ -0.23
PAAF1-216ENST00000546039 TNRC6CQ9HCJ0 1690 aaKnown RBP13.62□□□□□ -0.23
PAAF1-216ENST00000546039 CACNA1SQ13698 1873 aa13.61□□□□□ -0.23
PAAF1-216ENST00000546039 POLRMTO00411 1230 aaKnown RBP13.61□□□□□ -0.23
PAAF1-216ENST00000546039 MMP10P09238 476 aa13.61□□□□□ -0.23
PAAF1-216ENST00000546039 DDR1Q08345 913 aa13.61□□□□□ -0.23
PAAF1-216ENST00000546039 CWF19L2Q2TBE0 894 aaKnown RBP13.61□□□□□ -0.23
PAAF1-216ENST00000546039 INTS3Q68E01 1043 aaKnown RBP13.61□□□□□ -0.23
PAAF1-216ENST00000546039 SUPT16HQ9Y5B9 1047 aaKnown RBP13.61□□□□□ -0.23
PAAF1-216ENST00000546039 PARP3Q9Y6F1 533 aa13.61□□□□□ -0.23
PAAF1-216ENST00000546039 COL11A2P13942 1736 aaPredicted RBP13.61□□□□□ -0.23
PAAF1-216ENST00000546039 NTSR2O95665 410 aa13.6□□□□□ -0.23
PAAF1-216ENST00000546039 RLBP1P12271 317 aa13.6□□□□□ -0.23
PAAF1-216ENST00000546039 POLD1P28340 1107 aa13.6□□□□□ -0.23
PAAF1-216ENST00000546039 RIC1Q4ADV7 1423 aa13.6□□□□□ -0.23
PAAF1-216ENST00000546039 NBPF5PQ86XG9 351 aaPredicted RBP13.6□□□□□ -0.23
PAAF1-216ENST00000546039 TMEM57Q8N5G2 664 aa13.6□□□□□ -0.23
PAAF1-216ENST00000546039 KIAA1551Q9HCM1 1747 aa13.59□□□□□ -0.23
PAAF1-216ENST00000546039 SERPINB2P05120 415 aa13.59□□□□□ -0.23
PAAF1-216ENST00000546039 GCKRQ14397 625 aa13.59□□□□□ -0.23
PAAF1-216ENST00000546039 SUSD4Q5VX71 490 aa13.59□□□□□ -0.23
PAAF1-216ENST00000546039 CNBD1Q8NA66 436 aa13.59□□□□□ -0.23
PAAF1-216ENST00000546039 PANK1Q8TE04 598 aa13.59□□□□□ -0.23
PAAF1-216ENST00000546039 UTP14AQ9BVJ6 771 aaKnown RBP13.59□□□□□ -0.23
PAAF1-216ENST00000546039 SPON1Q9HCB6 807 aa13.59□□□□□ -0.23
PAAF1-216ENST00000546039 SPEF2Q9C093 1822 aa13.59□□□□□ -0.23
PAAF1-216ENST00000546039 BRCA1P38398 1863 aaKnown RBP13.59□□□□□ -0.23
PAAF1-216ENST00000546039 GRM8O00222 908 aa13.58□□□□□ -0.24
PAAF1-216ENST00000546039 NPHP1O15259 732 aa13.58□□□□□ -0.24
PAAF1-216ENST00000546039 PCCAP05165 728 aaPredicted RBP13.58□□□□□ -0.24
PAAF1-216ENST00000546039 TPTE2Q6XPS3 522 aa13.58□□□□□ -0.24
PAAF1-216ENST00000546039 ITPRIPQ8IWB1 547 aa13.58□□□□□ -0.24
PAAF1-216ENST00000546039 ZBTB38Q8NAP3 1195 aaPredicted RBP13.58□□□□□ -0.24
PAAF1-216ENST00000546039 C9orf78Q9NZ63 289 aaPredicted RBP13.58□□□□□ -0.24
PAAF1-216ENST00000546039 TRMT112Q9UI30 125 aaKnown RBP13.58□□□□□ -0.24
PAAF1-216ENST00000546039 ATF5Q9Y2D1 282 aaPredicted RBP13.58□□□□□ -0.24
PAAF1-216ENST00000546039 SH3TC1Q8TE82 1336 aa13.58□□□□□ -0.24
PAAF1-216ENST00000546039 CDHR2Q9BYE9 1310 aa13.58□□□□□ -0.24
PAAF1-216ENST00000546039 C10orf71Q711Q0 1435 aa13.57□□□□□ -0.24
PAAF1-216ENST00000546039 FAM177BA6PVY3 158 aa13.57□□□□□ -0.24
PAAF1-216ENST00000546039 HSP90B1P14625 803 aaKnown RBP13.57□□□□□ -0.24
PAAF1-216ENST00000546039 ST5P78524 1137 aa13.57□□□□□ -0.24
PAAF1-216ENST00000546039 MVPQ14764 893 aaKnown RBP13.57□□□□□ -0.24
PAAF1-216ENST00000546039 C20orf194Q5TEA3 1177 aa13.57□□□□□ -0.24
PAAF1-216ENST00000546039 SGIP1Q9BQI5 828 aa13.57□□□□□ -0.24
PAAF1-216ENST00000546039 DDX19BQ9UMR2 479 aa13.57□□□□□ -0.24
PAAF1-216ENST00000546039 UTYO14607 1347 aa13.57□□□□□ -0.24
PAAF1-216ENST00000546039 ABCC12Q96J65 1359 aa13.57□□□□□ -0.24
PAAF1-216ENST00000546039 GNAI3P08754 354 aa13.56□□□□□ -0.24
PAAF1-216ENST00000546039 GTF2E1P29083 439 aaPredicted RBP13.56□□□□□ -0.24
PAAF1-216ENST00000546039 PRR5LQ6MZQ0 368 aa13.56□□□□□ -0.24
PAAF1-216ENST00000546039 UBE3BQ7Z3V4 1068 aa13.56□□□□□ -0.24
PAAF1-216ENST00000546039 CHMP4BQ9H444 224 aaKnown RBP13.56□□□□□ -0.24
PAAF1-216ENST00000546039 COG6Q9Y2V7 657 aa13.56□□□□□ -0.24
PAAF1-216ENST00000546039 TAF1P21675 1872 aa13.55□□□□□ -0.24
PAAF1-216ENST00000546039 H7C1W4 665 aa13.55□□□□□ -0.24
PAAF1-216ENST00000546039 PTGER2P43116 358 aa13.55□□□□□ -0.24
PAAF1-216ENST00000546039 NUTM1Q86Y26 1132 aa13.55□□□□□ -0.24
PAAF1-216ENST00000546039 FAM89AQ96GI7 184 aa13.55□□□□□ -0.24
PAAF1-216ENST00000546039 USP44Q9H0E7 712 aa13.55□□□□□ -0.24
PAAF1-216ENST00000546039 HDAC5Q9UQL6 1122 aa13.55□□□□□ -0.24
PAAF1-216ENST00000546039 UBTFL1P0CB47 393 aaPredicted RBP13.54□□□□□ -0.24
PAAF1-216ENST00000546039 CASP7P55210 303 aa13.54□□□□□ -0.24
PAAF1-216ENST00000546039 ERFEQ4G0M1 354 aa13.54□□□□□ -0.24
PAAF1-216ENST00000546039 MEIS3Q99687 375 aa13.54□□□□□ -0.24
PAAF1-216ENST00000546039 IRS4O14654 1257 aaPredicted RBP13.53□□□□□ -0.24
PAAF1-216ENST00000546039 NBPF7P0C2Y1 421 aaPredicted RBP13.53□□□□□ -0.24
PAAF1-216ENST00000546039 RTL5Q5HYW3 569 aaPredicted RBP13.53□□□□□ -0.24
PAAF1-216ENST00000546039 SLC10A5Q5PT55 438 aa13.53□□□□□ -0.24
PAAF1-216ENST00000546039 PLA2G12BQ9BX93 195 aa13.53□□□□□ -0.24
PAAF1-216ENST00000546039 A0A1B0GUL6 1792 aa13.53□□□□□ -0.24
PAAF1-216ENST00000546039 PDE8AO60658 829 aa13.52□□□□□ -0.25
PAAF1-216ENST00000546039 SYNE4Q8N205 404 aa13.52□□□□□ -0.25
PAAF1-216ENST00000546039 BRIP1Q9BX63 1249 aa13.52□□□□□ -0.25
PAAF1-216ENST00000546039 ARFGEF1Q9Y6D6 1849 aa13.52□□□□□ -0.25
PAAF1-216ENST00000546039 ZBTB7BO15156 539 aaPredicted RBP13.51□□□□□ -0.25
PAAF1-216ENST00000546039 PDE6BP35913 854 aa13.51□□□□□ -0.25
PAAF1-216ENST00000546039 JARID2Q92833 1246 aaPredicted RBP13.51□□□□□ -0.25
PAAF1-216ENST00000546039 SUCLG2Q96I99 432 aa13.51□□□□□ -0.25
PAAF1-216ENST00000546039 CRBNQ96SW2 442 aa13.51□□□□□ -0.25
PAAF1-216ENST00000546039 PDZRN3Q9UPQ7 1066 aa13.51□□□□□ -0.25
PAAF1-216ENST00000546039 LRRC37AA6NMS7 1700 aa13.5□□□□□ -0.25
PAAF1-216ENST00000546039 GNAI2P04899 355 aa13.5□□□□□ -0.25
PAAF1-216ENST00000546039 NEFLP07196 543 aa13.5□□□□□ -0.25
PAAF1-216ENST00000546039 HCLS1P14317 486 aaPredicted RBP13.5□□□□□ -0.25
PAAF1-216ENST00000546039 CTSWP56202 376 aa13.5□□□□□ -0.25
PAAF1-216ENST00000546039 AAMPQ13685 434 aa13.5□□□□□ -0.25
PAAF1-216ENST00000546039 CCDC24Q8N4L8 307 aa13.5□□□□□ -0.25
PAAF1-216ENST00000546039 NLRP3Q96P20 1036 aa13.5□□□□□ -0.25
PAAF1-216ENST00000546039 RTL9Q8NET4 1388 aa13.49□□□□□ -0.25
PAAF1-216ENST00000546039 SLX4Q8IY92 1834 aa13.49□□□□□ -0.25
PAAF1-216ENST00000546039 ZBTB40Q9NUA8 1239 aa13.49□□□□□ -0.25
PAAF1-216ENST00000546039 PPP1R1BQ9UD71 204 aaPredicted RBP13.49□□□□□ -0.25
PAAF1-216ENST00000546039 CD2APQ9Y5K6 639 aa13.49□□□□□ -0.25
PAAF1-216ENST00000546039 LRRFIP2Q9Y608 721 aaKnown RBP13.49□□□□□ -0.25
PAAF1-216ENST00000546039 KLRG2A4D1S0 409 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms