RNA–Protein interactions for RNA: ENST00000546006.5

CCDC189-212, Transcript of coiled-coil domain containing 189, humanhuman

TSL 2

Gene CCDC189, Length 1,533 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-212ENST00000546006 SERPINB2P05120 415 aa23.47■■□□□ 1.35
CCDC189-212ENST00000546006 MS4A1P11836 297 aa23.47■■□□□ 1.35
CCDC189-212ENST00000546006 PPP1R42Q7Z4L9 355 aa23.47■■□□□ 1.35
CCDC189-212ENST00000546006 FAM177BA6PVY3 158 aa23.46■■□□□ 1.35
CCDC189-212ENST00000546006 PTGER2P43116 358 aa23.46■■□□□ 1.35
CCDC189-212ENST00000546006 INTS3Q68E01 1043 aaKnown RBP23.46■■□□□ 1.35
CCDC189-212ENST00000546006 NBPF5PQ86XG9 351 aaPredicted RBP23.46■■□□□ 1.35
CCDC189-212ENST00000546006 UTP14AQ9BVJ6 771 aaKnown RBP23.46■■□□□ 1.35
CCDC189-212ENST00000546006 SUPT16HQ9Y5B9 1047 aaKnown RBP23.46■■□□□ 1.35
CCDC189-212ENST00000546006 RNF123Q5XPI4 1314 aa23.46■■□□□ 1.35
CCDC189-212ENST00000546006 IBTKQ9P2D0 1353 aaPredicted RBP23.46■■□□□ 1.35
CCDC189-212ENST00000546006 NTSR2O95665 410 aa23.45■■□□□ 1.34
CCDC189-212ENST00000546006 RLBP1P12271 317 aa23.45■■□□□ 1.34
CCDC189-212ENST00000546006 GCKRQ14397 625 aa23.45■■□□□ 1.34
CCDC189-212ENST00000546006 NYXQ9GZU5 481 aa23.45■■□□□ 1.34
CCDC189-212ENST00000546006 TPTE2Q6XPS3 522 aa23.44■■□□□ 1.34
CCDC189-212ENST00000546006 TMEM57Q8N5G2 664 aa23.44■■□□□ 1.34
CCDC189-212ENST00000546006 AFDNP55196 1824 aaKnown RBP23.44■■□□□ 1.34
CCDC189-212ENST00000546006 N4BP2Q86UW6 1770 aaPredicted RBP23.44■■□□□ 1.34
CCDC189-212ENST00000546006 PDE3AQ14432 1141 aa23.43■■□□□ 1.34
CCDC189-212ENST00000546006 CNBD1Q8NA66 436 aa23.43■■□□□ 1.34
CCDC189-212ENST00000546006 PANK1Q8TE04 598 aa23.43■■□□□ 1.34
CCDC189-212ENST00000546006 TRMT112Q9UI30 125 aaKnown RBP23.43■■□□□ 1.34
CCDC189-212ENST00000546006 NRXN2Q9P2S2 1712 aa23.42■■□□□ 1.34
CCDC189-212ENST00000546006 PRR5LQ6MZQ0 368 aa23.42■■□□□ 1.34
CCDC189-212ENST00000546006 ZBTB38Q8NAP3 1195 aaPredicted RBP23.42■■□□□ 1.34
CCDC189-212ENST00000546006 SH3TC1Q8TE82 1336 aa23.41■■□□□ 1.34
CCDC189-212ENST00000546006 NPHP1O15259 732 aa23.41■■□□□ 1.34
CCDC189-212ENST00000546006 PCCAP05165 728 aaPredicted RBP23.41■■□□□ 1.34
CCDC189-212ENST00000546006 GTF2E1P29083 439 aaPredicted RBP23.41■■□□□ 1.34
CCDC189-212ENST00000546006 C20orf194Q5TEA3 1177 aa23.41■■□□□ 1.34
CCDC189-212ENST00000546006 NUTM1Q86Y26 1132 aa23.41■■□□□ 1.34
CCDC189-212ENST00000546006 H7C1W4 665 aa23.4■■□□□ 1.34
CCDC189-212ENST00000546006 ERFEQ4G0M1 354 aa23.4■■□□□ 1.34
CCDC189-212ENST00000546006 FAM89AQ96GI7 184 aa23.4■■□□□ 1.34
CCDC189-212ENST00000546006 GRM8O00222 908 aa23.39■■□□□ 1.34
CCDC189-212ENST00000546006 ST5P78524 1137 aa23.39■■□□□ 1.34
CCDC189-212ENST00000546006 C9orf78Q9NZ63 289 aaPredicted RBP23.39■■□□□ 1.34
CCDC189-212ENST00000546006 RTL5Q5HYW3 569 aaPredicted RBP23.38■■□□□ 1.33
CCDC189-212ENST00000546006 ITPRIPQ8IWB1 547 aa23.38■■□□□ 1.33
CCDC189-212ENST00000546006 UBE3BQ7Z3V4 1068 aa23.38■■□□□ 1.33
CCDC189-212ENST00000546006 SYNE4Q8N205 404 aa23.38■■□□□ 1.33
CCDC189-212ENST00000546006 CCDC24Q8N4L8 307 aa23.38■■□□□ 1.33
CCDC189-212ENST00000546006 JARID2Q92833 1246 aaPredicted RBP23.38■■□□□ 1.33
CCDC189-212ENST00000546006 USP44Q9H0E7 712 aa23.38■■□□□ 1.33
CCDC189-212ENST00000546006 ABCC12Q96J65 1359 aa23.37■■□□□ 1.33
CCDC189-212ENST00000546006 UTYO14607 1347 aa23.37■■□□□ 1.33
CCDC189-212ENST00000546006 CASP7P55210 303 aa23.37■■□□□ 1.33
CCDC189-212ENST00000546006 MVPQ14764 893 aaKnown RBP23.37■■□□□ 1.33
CCDC189-212ENST00000546006 COG6Q9Y2V7 657 aa23.37■■□□□ 1.33
CCDC189-212ENST00000546006 CDHR2Q9BYE9 1310 aa23.36■■□□□ 1.33
CCDC189-212ENST00000546006 C10orf71Q711Q0 1435 aa23.36■■□□□ 1.33
CCDC189-212ENST00000546006 SLC10A5Q5PT55 438 aa23.36■■□□□ 1.33
CCDC189-212ENST00000546006 IRS4O14654 1257 aaPredicted RBP23.35■■□□□ 1.33
CCDC189-212ENST00000546006 NBPF7P0C2Y1 421 aaPredicted RBP23.35■■□□□ 1.33
CCDC189-212ENST00000546006 BRIP1Q9BX63 1249 aa23.35■■□□□ 1.33
CCDC189-212ENST00000546006 RIC1Q4ADV7 1423 aa23.35■■□□□ 1.33
CCDC189-212ENST00000546006 HCLS1P14317 486 aaPredicted RBP23.33■■□□□ 1.33
CCDC189-212ENST00000546006 HSP90B1P14625 803 aaKnown RBP23.33■■□□□ 1.33
CCDC189-212ENST00000546006 MEIS3Q99687 375 aa23.33■■□□□ 1.33
CCDC189-212ENST00000546006 DDX19BQ9UMR2 479 aa23.33■■□□□ 1.33
CCDC189-212ENST00000546006 GNAI3P08754 354 aa23.33■■□□□ 1.32
CCDC189-212ENST00000546006 ZBTB7BO15156 539 aaPredicted RBP23.32■■□□□ 1.32
CCDC189-212ENST00000546006 UBTFL1P0CB47 393 aaPredicted RBP23.32■■□□□ 1.32
CCDC189-212ENST00000546006 PDE8AO60658 829 aa23.31■■□□□ 1.32
CCDC189-212ENST00000546006 NLRP3Q96P20 1036 aa23.31■■□□□ 1.32
CCDC189-212ENST00000546006 PLA2G12BQ9BX93 195 aa23.31■■□□□ 1.32
CCDC189-212ENST00000546006 PPP1R1BQ9UD71 204 aaPredicted RBP23.31■■□□□ 1.32
CCDC189-212ENST00000546006 LRP5O75197 1615 aa23.31■■□□□ 1.32
CCDC189-212ENST00000546006 DDX60Q8IY21 1712 aaKnown RBP23.3■■□□□ 1.32
CCDC189-212ENST00000546006 LAMB2P55268 1798 aa23.3■■□□□ 1.32
CCDC189-212ENST00000546006 PDE6BP35913 854 aa23.3■■□□□ 1.32
CCDC189-212ENST00000546006 SUCLG2Q96I99 432 aa23.3■■□□□ 1.32
CCDC189-212ENST00000546006 CD2APQ9Y5K6 639 aa23.3■■□□□ 1.32
CCDC189-212ENST00000546006 KIF13BQ9NQT8 1826 aa23.3■■□□□ 1.32
CCDC189-212ENST00000546006 ANKRD31Q8N7Z5 1873 aa23.3■■□□□ 1.32
CCDC189-212ENST00000546006 HDAC5Q9UQL6 1122 aa23.29■■□□□ 1.32
CCDC189-212ENST00000546006 TNRC6CQ9HCJ0 1690 aaKnown RBP23.29■■□□□ 1.32
CCDC189-212ENST00000546006 KLRG2A4D1S0 409 aaPredicted RBP23.28■■□□□ 1.32
CCDC189-212ENST00000546006 C3orf67Q6ZVT6 689 aa23.28■■□□□ 1.32
CCDC189-212ENST00000546006 KLHL34Q8N239 644 aa23.28■■□□□ 1.32
CCDC189-212ENST00000546006 KAZALD1Q96I82 304 aa23.28■■□□□ 1.32
CCDC189-212ENST00000546006 CHMP4BQ9H444 224 aaKnown RBP23.28■■□□□ 1.32
CCDC189-212ENST00000546006 CRBNQ96SW2 442 aa23.28■■□□□ 1.32
CCDC189-212ENST00000546006 PDZRN3Q9UPQ7 1066 aa23.28■■□□□ 1.32
CCDC189-212ENST00000546006 CTSWP56202 376 aa23.27■■□□□ 1.32
CCDC189-212ENST00000546006 FOXO4P98177 505 aa23.27■■□□□ 1.32
CCDC189-212ENST00000546006 SF3B3Q15393 1217 aaKnown RBP23.27■■□□□ 1.32
CCDC189-212ENST00000546006 CRY2Q49AN0 593 aa23.27■■□□□ 1.32
CCDC189-212ENST00000546006 EPHA10Q5JZY3 1008 aa23.27■■□□□ 1.32
CCDC189-212ENST00000546006 GNAI2P04899 355 aa23.26■■□□□ 1.31
CCDC189-212ENST00000546006 TGFB2P61812 414 aa23.26■■□□□ 1.31
CCDC189-212ENST00000546006 LRRFIP2Q9Y608 721 aaKnown RBP23.26■■□□□ 1.31
CCDC189-212ENST00000546006 C2CD5Q86YS7 1000 aa23.25■■□□□ 1.31
CCDC189-212ENST00000546006 FHDC1Q9C0D6 1143 aaPredicted RBP23.25■■□□□ 1.31
CCDC189-212ENST00000546006 BICC1Q9H694 974 aaKnown RBP23.25■■□□□ 1.31
CCDC189-212ENST00000546006 ZBTB40Q9NUA8 1239 aa23.25■■□□□ 1.31
CCDC189-212ENST00000546006 H0YIN7 160 aa23.24■■□□□ 1.31
CCDC189-212ENST00000546006 CSF1RP07333 972 aa23.24■■□□□ 1.31
CCDC189-212ENST00000546006 TTLL11Q8NHH1 800 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms