RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 FKBP4Q02790 459 aaKnown RBP eCLIP25.87■■□□□ 1.73
CHD4-213ENST00000545584 HDGFL1Q5TGJ6 251 aa25.87■■□□□ 1.73
CHD4-213ENST00000545584 UTP14AQ9BVJ6 771 aaKnown RBP25.87■■□□□ 1.73
CHD4-213ENST00000545584 RIC1Q4ADV7 1423 aa25.87■■□□□ 1.73
CHD4-213ENST00000545584 SMC1BQ8NDV3 1235 aa25.86■■□□□ 1.73
CHD4-213ENST00000545584 CHPF2Q9P2E5 772 aa25.85■■□□□ 1.73
CHD4-213ENST00000545584 CC2D2BQ6DHV5 1058 aa25.84■■□□□ 1.73
CHD4-213ENST00000545584 RBM17Q96I25 401 aaKnown RBP25.84■■□□□ 1.73
CHD4-213ENST00000545584 NLRP3Q96P20 1036 aa25.84■■□□□ 1.73
CHD4-213ENST00000545584 HOXA10P31260 410 aaPredicted RBP25.83■■□□□ 1.73
CHD4-213ENST00000545584 MBIPQ9NS73 344 aa25.83■■□□□ 1.73
CHD4-213ENST00000545584 DBF4Q9UBU7 674 aaPredicted RBP25.83■■□□□ 1.73
CHD4-213ENST00000545584 RNF123Q5XPI4 1314 aa25.83■■□□□ 1.73
CHD4-213ENST00000545584 GNAI1P63096 354 aa25.82■■□□□ 1.72
CHD4-213ENST00000545584 TCIRG1Q13488 830 aa25.82■■□□□ 1.72
CHD4-213ENST00000545584 DUSP27Q5VZP5 1158 aa25.82■■□□□ 1.72
CHD4-213ENST00000545584 OLFM4Q6UX06 510 aa25.82■■□□□ 1.72
CHD4-213ENST00000545584 CRAMP1Q96RY5 1269 aa25.82■■□□□ 1.72
CHD4-213ENST00000545584 ZNF277Q9NRM2 450 aaPredicted RBP25.82■■□□□ 1.72
CHD4-213ENST00000545584 IFT57Q9NWB7 429 aa25.82■■□□□ 1.72
CHD4-213ENST00000545584 WDR90Q96KV7 1748 aa25.8■■□□□ 1.72
CHD4-213ENST00000545584 ZNF853P0CG23 659 aa25.8■■□□□ 1.72
CHD4-213ENST00000545584 GRIPAP1Q4V328 841 aa25.8■■□□□ 1.72
CHD4-213ENST00000545584 SLC10A5Q5PT55 438 aa25.8■■□□□ 1.72
CHD4-213ENST00000545584 SYNE4Q8N205 404 aa25.8■■□□□ 1.72
CHD4-213ENST00000545584 TMX4Q9H1E5 349 aaPredicted RBP25.8■■□□□ 1.72
CHD4-213ENST00000545584 DDNO94850 711 aaPredicted RBP25.79■■□□□ 1.72
CHD4-213ENST00000545584 NLRP10Q86W26 655 aa25.79■■□□□ 1.72
CHD4-213ENST00000545584 PLBD2Q8NHP8 589 aa25.79■■□□□ 1.72
CHD4-213ENST00000545584 HYPKQ9NX55 129 aa25.79■■□□□ 1.72
CHD4-213ENST00000545584 CEP350Q5VT06 3117 aa25.79■■□□□ 1.72
CHD4-213ENST00000545584 ANKRD36CQ5JPF3 1778 aa25.78■■□□□ 1.72
CHD4-213ENST00000545584 POTECB2RU33 542 aa25.78■■□□□ 1.72
CHD4-213ENST00000545584 IARSP41252 1262 aaKnown RBP25.78■■□□□ 1.72
CHD4-213ENST00000545584 ANKRD13DQ6ZTN6 518 aa25.78■■□□□ 1.72
CHD4-213ENST00000545584 PSMD1Q99460 953 aa25.78■■□□□ 1.72
CHD4-213ENST00000545584 TRMT112Q9UI30 125 aaKnown RBP25.78■■□□□ 1.72
CHD4-213ENST00000545584 ZNF316A6NFI3 1004 aaPredicted RBP25.77■■□□□ 1.72
CHD4-213ENST00000545584 PPEF1O14829 653 aaPredicted RBP25.77■■□□□ 1.72
CHD4-213ENST00000545584 C3orf67Q6ZVT6 689 aa25.76■■□□□ 1.71
CHD4-213ENST00000545584 SH3TC1Q8TE82 1336 aa25.75■■□□□ 1.71
CHD4-213ENST00000545584 IQCA1LA6NCM1 817 aa25.75■■□□□ 1.71
CHD4-213ENST00000545584 ANP32CO43423 234 aa25.75■■□□□ 1.71
CHD4-213ENST00000545584 JDP2Q8WYK2 163 aa25.75■■□□□ 1.71
CHD4-213ENST00000545584 CHMP4AQ9BY43 222 aa25.75■■□□□ 1.71
CHD4-213ENST00000545584 TCERG1O14776 1098 aaKnown RBP25.74■■□□□ 1.71
CHD4-213ENST00000545584 CCDC184Q52MB2 194 aa25.74■■□□□ 1.71
CHD4-213ENST00000545584 ELL2O00472 640 aaPredicted RBP25.73■■□□□ 1.71
CHD4-213ENST00000545584 HCLS1P14317 486 aaPredicted RBP25.73■■□□□ 1.71
CHD4-213ENST00000545584 SNED1Q8TER0 1413 aa25.71■■□□□ 1.71
CHD4-213ENST00000545584 GOLGA2Q08379 1002 aa25.71■■□□□ 1.71
CHD4-213ENST00000545584 DDX46Q7L014 1031 aaKnown RBP25.71■■□□□ 1.71
CHD4-213ENST00000545584 DNAJC5GQ8N7S2 189 aa25.71■■□□□ 1.71
CHD4-213ENST00000545584 L3MBTL3Q96JM7 780 aaPredicted RBP25.71■■□□□ 1.71
CHD4-213ENST00000545584 ISCA1Q9BUE6 129 aa25.71■■□□□ 1.71
CHD4-213ENST00000545584 MRS2Q9HD23 443 aa25.71■■□□□ 1.71
CHD4-213ENST00000545584 ABCC4O15439 1325 aa25.7■■□□□ 1.71
CHD4-213ENST00000545584 ZNF541Q9H0D2 1346 aa25.7■■□□□ 1.71
CHD4-213ENST00000545584 FZD9O00144 591 aa25.7■■□□□ 1.7
CHD4-213ENST00000545584 BBOX1O75936 387 aa25.7■■□□□ 1.7
CHD4-213ENST00000545584 RIC3Q7Z5B4 369 aa25.7■■□□□ 1.7
CHD4-213ENST00000545584 ATP6V0A2Q9Y487 856 aa25.7■■□□□ 1.7
CHD4-213ENST00000545584 ATP5J2-PTCD1G3V325 749 aa25.69■■□□□ 1.7
CHD4-213ENST00000545584 EIF6P56537 245 aaKnown RBP25.69■■□□□ 1.7
CHD4-213ENST00000545584 LARGE2Q8N3Y3 721 aa25.69■■□□□ 1.7
CHD4-213ENST00000545584 HTRA3P83110 453 aa25.68■■□□□ 1.7
CHD4-213ENST00000545584 CHADLQ6NUI6 762 aa25.68■■□□□ 1.7
CHD4-213ENST00000545584 C8orf58Q8NAV2 365 aa25.68■■□□□ 1.7
CHD4-213ENST00000545584 CCDC27Q2M243 656 aa25.67■■□□□ 1.7
CHD4-213ENST00000545584 CCDC30Q5VVM6 783 aa25.67■■□□□ 1.7
CHD4-213ENST00000545584 ZNF428Q96B54 188 aa25.67■■□□□ 1.7
CHD4-213ENST00000545584 SCN4AP35499 1836 aa25.67■■□□□ 1.7
CHD4-213ENST00000545584 SP8Q8IXZ3 490 aa25.66■■□□□ 1.7
CHD4-213ENST00000545584 GPC2Q8N158 579 aa25.66■■□□□ 1.7
CHD4-213ENST00000545584 SUPT20HQ8NEM7 779 aa25.66■■□□□ 1.7
CHD4-213ENST00000545584 TAF1DQ9H5J8 278 aaPredicted RBP25.66■■□□□ 1.7
CHD4-213ENST00000545584 PHAXQ9H814 394 aaKnown RBP25.66■■□□□ 1.7
CHD4-213ENST00000545584 HACL1Q9UJ83 578 aa25.66■■□□□ 1.7
CHD4-213ENST00000545584 TRIM28Q13263 835 aaKnown RBP25.65■■□□□ 1.7
CHD4-213ENST00000545584 GRAPQ13588 217 aa25.65■■□□□ 1.7
CHD4-213ENST00000545584 GRAPLQ8TC17 118 aaPredicted RBP25.65■■□□□ 1.7
CHD4-213ENST00000545584 KLRG1Q96E93 195 aa25.65■■□□□ 1.7
CHD4-213ENST00000545584 FAM89AQ96GI7 184 aa25.65■■□□□ 1.7
CHD4-213ENST00000545584 LAMB2P55268 1798 aa25.64■■□□□ 1.7
CHD4-213ENST00000545584 PPIP5K2O43314 1243 aa25.64■■□□□ 1.7
CHD4-213ENST00000545584 DDX58O95786 925 aaKnown RBP25.64■■□□□ 1.7
CHD4-213ENST00000545584 TMC4Q7Z404 712 aa25.64■■□□□ 1.7
CHD4-213ENST00000545584 LDHDQ86WU2 507 aa25.64■■□□□ 1.7
CHD4-213ENST00000545584 WWC1Q8IX03 1113 aa25.64■■□□□ 1.7
CHD4-213ENST00000545584 NIM1KQ8IY84 436 aa25.64■■□□□ 1.7
CHD4-213ENST00000545584 VPS33BQ9H267 617 aa25.64■■□□□ 1.7
CHD4-213ENST00000545584 DPP8Q6V1X1 898 aaPredicted RBP25.63■■□□□ 1.69
CHD4-213ENST00000545584 MPNDQ8N594 471 aa25.63■■□□□ 1.69
CHD4-213ENST00000545584 GJA3Q9Y6H8 435 aa25.63■■□□□ 1.69
CHD4-213ENST00000545584 POTEIP0CG38 1075 aa25.62■■□□□ 1.69
CHD4-213ENST00000545584 POTEJP0CG39 1038 aa25.62■■□□□ 1.69
CHD4-213ENST00000545584 HSP90B1P14625 803 aaKnown RBP25.62■■□□□ 1.69
CHD4-213ENST00000545584 EPHX2P34913 555 aa25.62■■□□□ 1.69
CHD4-213ENST00000545584 NCBP3Q53F19 620 aaKnown RBP25.62■■□□□ 1.69
CHD4-213ENST00000545584 EAPPQ56P03 285 aaPredicted RBP25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms