RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 UQCRHLA0A096LP55 91 aa22.69■■□□□ 1.22
MSLN-202ENST00000545450 EXOC5O00471 708 aa22.69■■□□□ 1.22
MSLN-202ENST00000545450 PTCD1O75127 700 aaKnown RBP22.69■■□□□ 1.22
MSLN-202ENST00000545450 UQCRHP07919 91 aa22.69■■□□□ 1.22
MSLN-202ENST00000545450 CWF19L2Q2TBE0 894 aaKnown RBP22.69■■□□□ 1.22
MSLN-202ENST00000545450 FOXD4L5Q5VV16 416 aaPredicted RBP22.69■■□□□ 1.22
MSLN-202ENST00000545450 FOXD4L4Q8WXT5 416 aaPredicted RBP22.69■■□□□ 1.22
MSLN-202ENST00000545450 ANAPC15P60006 121 aa22.68■■□□□ 1.22
MSLN-202ENST00000545450 IL17RAQ96F46 866 aa22.68■■□□□ 1.22
MSLN-202ENST00000545450 ALDH1L1O75891 902 aa22.67■■□□□ 1.22
MSLN-202ENST00000545450 PIGBQ92521 554 aa22.67■■□□□ 1.22
MSLN-202ENST00000545450 DOT1LQ8TEK3 1739 aa22.67■■□□□ 1.22
MSLN-202ENST00000545450 DYNC1I1O14576 645 aa22.66■■□□□ 1.22
MSLN-202ENST00000545450 RIC3Q7Z5B4 369 aa22.66■■□□□ 1.22
MSLN-202ENST00000545450 TSPY26PQ9H489 355 aa22.66■■□□□ 1.22
MSLN-202ENST00000545450 FAM13BQ9NYF5 915 aa22.66■■□□□ 1.22
MSLN-202ENST00000545450 MCCP23508 829 aa22.66■■□□□ 1.22
MSLN-202ENST00000545450 LINS1Q8NG48 757 aa22.66■■□□□ 1.22
MSLN-202ENST00000545450 THRAP3Q9Y2W1 955 aaKnown RBP22.66■■□□□ 1.22
MSLN-202ENST00000545450 SPATA31A5Q5VU36 1347 aa22.65■■□□□ 1.22
MSLN-202ENST00000545450 SPATA31A7Q8IWB4 1347 aa22.65■■□□□ 1.22
MSLN-202ENST00000545450 AFDNP55196 1824 aaKnown RBP22.65■■□□□ 1.22
MSLN-202ENST00000545450 NBPF26B4DH59 902 aa22.65■■□□□ 1.22
MSLN-202ENST00000545450 NBPF14Q5TI25 921 aa22.65■■□□□ 1.22
MSLN-202ENST00000545450 NBPF10Q6P3W6 841 aaKnown RBP22.65■■□□□ 1.22
MSLN-202ENST00000545450 NBPF15Q8N660 670 aa22.65■■□□□ 1.22
MSLN-202ENST00000545450 RNF214Q8ND24 703 aa22.65■■□□□ 1.22
MSLN-202ENST00000545450 SYAP1Q96A49 352 aaPredicted RBP22.65■■□□□ 1.22
MSLN-202ENST00000545450 ASAP1Q9ULH1 1129 aa22.65■■□□□ 1.22
MSLN-202ENST00000545450 EXOC6BQ9Y2D4 811 aa22.65■■□□□ 1.22
MSLN-202ENST00000545450 JCADQ9P266 1359 aa22.65■■□□□ 1.22
MSLN-202ENST00000545450 PALD1Q9ULE6 856 aa22.65■■□□□ 1.22
MSLN-202ENST00000545450 IGKV5-2P06315 115 aa22.64■■□□□ 1.21
MSLN-202ENST00000545450 SASS6Q6UVJ0 657 aa22.64■■□□□ 1.21
MSLN-202ENST00000545450 CDCA7Q9BWT1 371 aaPredicted RBP22.63■■□□□ 1.21
MSLN-202ENST00000545450 BCL9O00512 1426 aa22.63■■□□□ 1.21
MSLN-202ENST00000545450 ANKRD13DQ6ZTN6 518 aa22.63■■□□□ 1.21
MSLN-202ENST00000545450 PPP1R42Q7Z4L9 355 aa22.63■■□□□ 1.21
MSLN-202ENST00000545450 SSH3Q8TE77 659 aa22.63■■□□□ 1.21
MSLN-202ENST00000545450 ATG3Q9NT62 314 aa22.63■■□□□ 1.21
MSLN-202ENST00000545450 C9orf78Q9NZ63 289 aaPredicted RBP22.63■■□□□ 1.21
MSLN-202ENST00000545450 A1BGP04217 495 aa22.62■■□□□ 1.21
MSLN-202ENST00000545450 CHMLP26374 656 aa22.62■■□□□ 1.21
MSLN-202ENST00000545450 NUP188Q5SRE5 1749 aa22.62■■□□□ 1.21
MSLN-202ENST00000545450 MTERF4Q7Z6M4 381 aaKnown RBP22.62■■□□□ 1.21
MSLN-202ENST00000545450 POLA2Q14181 598 aa22.62■■□□□ 1.21
MSLN-202ENST00000545450 METTL22Q9BUU2 404 aaPredicted RBP22.62■■□□□ 1.21
MSLN-202ENST00000545450 MX1P20591 662 aa22.61■■□□□ 1.21
MSLN-202ENST00000545450 LRRCC1Q9C099 1032 aa22.61■■□□□ 1.21
MSLN-202ENST00000545450 PHF14O94880 888 aa22.6■■□□□ 1.21
MSLN-202ENST00000545450 DDB1Q16531 1140 aa22.6■■□□□ 1.21
MSLN-202ENST00000545450 TSHZ3Q63HK5 1081 aa22.6■■□□□ 1.21
MSLN-202ENST00000545450 MYD88Q99836 296 aa22.6■■□□□ 1.21
MSLN-202ENST00000545450 CCDC9Q9Y3X0 531 aaKnown RBP22.6■■□□□ 1.21
MSLN-202ENST00000545450 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.6■■□□□ 1.21
MSLN-202ENST00000545450 NEURL1BA8MQ27 555 aa22.6■■□□□ 1.21
MSLN-202ENST00000545450 GRM8O00222 908 aa22.6■■□□□ 1.21
MSLN-202ENST00000545450 UTYO14607 1347 aa22.6■■□□□ 1.21
MSLN-202ENST00000545450 NEXNQ0ZGT2 675 aa22.59■■□□□ 1.21
MSLN-202ENST00000545450 CERKQ8TCT0 537 aa22.59■■□□□ 1.21
MSLN-202ENST00000545450 C8orf37Q96NL8 207 aa22.59■■□□□ 1.21
MSLN-202ENST00000545450 STAP2Q9UGK3 403 aa22.59■■□□□ 1.21
MSLN-202ENST00000545450 TUBGCP6Q96RT7 1819 aa22.59■■□□□ 1.21
MSLN-202ENST00000545450 SRGAP3O43295 1099 aa22.59■■□□□ 1.21
MSLN-202ENST00000545450 ANO2Q9NQ90 1003 aa22.59■■□□□ 1.21
MSLN-202ENST00000545450 BCL9LQ86UU0 1499 aa22.58■■□□□ 1.21
MSLN-202ENST00000545450 KIAA2012Q0VF49 1180 aa22.58■■□□□ 1.21
MSLN-202ENST00000545450 AEBP2Q6ZN18 517 aaPredicted RBP22.58■■□□□ 1.21
MSLN-202ENST00000545450 UNC5CLQ8IV45 518 aa22.58■■□□□ 1.21
MSLN-202ENST00000545450 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.58■■□□□ 1.21
MSLN-202ENST00000545450 EPB41L2O43491 1005 aaKnown RBP22.57■■□□□ 1.2
MSLN-202ENST00000545450 GADD45BO75293 160 aaPredicted RBP22.57■■□□□ 1.2
MSLN-202ENST00000545450 PTMAP06454 111 aaKnown RBP22.57■■□□□ 1.2
MSLN-202ENST00000545450 UVSSAQ2YD98 709 aa22.57■■□□□ 1.2
MSLN-202ENST00000545450 BARGINQ6ZT62 677 aa22.57■■□□□ 1.2
MSLN-202ENST00000545450 FAM184AQ8NB25 1140 aa22.57■■□□□ 1.2
MSLN-202ENST00000545450 SYTL4Q96C24 671 aaPredicted RBP22.57■■□□□ 1.2
MSLN-202ENST00000545450 WDR33Q9C0J8 1336 aaKnown RBP22.57■■□□□ 1.2
MSLN-202ENST00000545450 TTLL7Q6ZT98 887 aa22.57■■□□□ 1.2
MSLN-202ENST00000545450 PLBD2Q8NHP8 589 aa22.57■■□□□ 1.2
MSLN-202ENST00000545450 KAZALD1Q96I82 304 aa22.57■■□□□ 1.2
MSLN-202ENST00000545450 SUCLG2Q96I99 432 aa22.57■■□□□ 1.2
MSLN-202ENST00000545450 MTX1Q13505 466 aa22.56■■□□□ 1.2
MSLN-202ENST00000545450 GCKRQ14397 625 aa22.56■■□□□ 1.2
MSLN-202ENST00000545450 USP48Q86UV5 1035 aa22.56■■□□□ 1.2
MSLN-202ENST00000545450 DNAJC10Q8IXB1 793 aa22.56■■□□□ 1.2
MSLN-202ENST00000545450 MARCH10Q8NA82 808 aaPredicted RBP22.56■■□□□ 1.2
MSLN-202ENST00000545450 TMEM87AQ8NBN3 555 aa22.56■■□□□ 1.2
MSLN-202ENST00000545450 NGLY1Q96IV0 654 aa22.56■■□□□ 1.2
MSLN-202ENST00000545450 NOL8Q76FK4 1167 aaKnown RBP22.55■■□□□ 1.2
MSLN-202ENST00000545450 RILPL2Q969X0 211 aa22.55■■□□□ 1.2
MSLN-202ENST00000545450 TRIM6-TRIM34B2RNG4 842 aa22.55■■□□□ 1.2
MSLN-202ENST00000545450 SLC4A9Q96Q91 983 aa22.55■■□□□ 1.2
MSLN-202ENST00000545450 UPF3BQ9BZI7 483 aaKnown RBP22.54■■□□□ 1.2
MSLN-202ENST00000545450 GDPD2Q9HCC8 539 aa22.54■■□□□ 1.2
MSLN-202ENST00000545450 TJP1Q07157 1748 aa22.54■■□□□ 1.2
MSLN-202ENST00000545450 SURF6O75683 361 aaKnown RBP22.53■■□□□ 1.2
MSLN-202ENST00000545450 AOX1Q06278 1338 aa22.53■■□□□ 1.2
MSLN-202ENST00000545450 ATP5J2-PTCD1G3V325 749 aa22.53■■□□□ 1.2
MSLN-202ENST00000545450 BICC1Q9H694 974 aaKnown RBP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms