RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 ZSCAN22P10073 491 aaPredicted RBP14.95□□□□□ -0.02
PAAF1-215ENST00000544909 NLRP2Q9NX02 1062 aa14.95□□□□□ -0.02
PAAF1-215ENST00000544909 XPCQ01831 940 aaPredicted RBP14.94□□□□□ -0.02
PAAF1-215ENST00000544909 ANKRD13DQ6ZTN6 518 aa14.94□□□□□ -0.02
PAAF1-215ENST00000544909 RUFY3Q7L099 469 aa14.94□□□□□ -0.02
PAAF1-215ENST00000544909 RASEFQ8IZ41 740 aa14.94□□□□□ -0.02
PAAF1-215ENST00000544909 TMEM63CQ9P1W3 806 aa14.94□□□□□ -0.02
PAAF1-215ENST00000544909 SPATA31A3Q5VYP0 1347 aa14.94□□□□□ -0.02
PAAF1-215ENST00000544909 STX6O43752 255 aa14.94□□□□□ -0.02
PAAF1-215ENST00000544909 ATP5JP18859 108 aa14.94□□□□□ -0.02
PAAF1-215ENST00000544909 CASTP20810 708 aaKnown RBP14.94□□□□□ -0.02
PAAF1-215ENST00000544909 PDCP20941 246 aa14.94□□□□□ -0.02
PAAF1-215ENST00000544909 KRT32Q14532 448 aa14.94□□□□□ -0.02
PAAF1-215ENST00000544909 EAF2Q96CJ1 260 aaPredicted RBP14.94□□□□□ -0.02
PAAF1-215ENST00000544909 SMC3Q9UQE7 1217 aa14.94□□□□□ -0.02
PAAF1-215ENST00000544909 ARFGEF2Q9Y6D5 1785 aa14.93□□□□□ -0.02
PAAF1-215ENST00000544909 PRIM1P49642 420 aaKnown RBP14.93□□□□□ -0.02
PAAF1-215ENST00000544909 XAGE3Q8WTP9 111 aa14.93□□□□□ -0.02
PAAF1-215ENST00000544909 ZNF496Q96IT1 587 aaPredicted RBP14.93□□□□□ -0.02
PAAF1-215ENST00000544909 PDRG1Q9NUG6 133 aa14.93□□□□□ -0.02
PAAF1-215ENST00000544909 UBR2Q8IWV8 1755 aa14.92□□□□□ -0.02
PAAF1-215ENST00000544909 UBE2HP62256 183 aa14.92□□□□□ -0.02
PAAF1-215ENST00000544909 UVSSAQ2YD98 709 aa14.92□□□□□ -0.02
PAAF1-215ENST00000544909 USPL1Q5W0Q7 1092 aa14.92□□□□□ -0.02
PAAF1-215ENST00000544909 NFATC2IPQ8NCF5 419 aa14.92□□□□□ -0.02
PAAF1-215ENST00000544909 PLBD2Q8NHP8 589 aa14.92□□□□□ -0.02
PAAF1-215ENST00000544909 PA2G4Q9UQ80 394 aaKnown RBP14.92□□□□□ -0.02
PAAF1-215ENST00000544909 MAP4K4O95819 1239 aaPredicted RBP14.92□□□□□ -0.02
PAAF1-215ENST00000544909 ZC3H6P61129 1189 aaKnown RBP14.92□□□□□ -0.02
PAAF1-215ENST00000544909 COPS6Q7L5N1 327 aa14.92□□□□□ -0.02
PAAF1-215ENST00000544909 GPR108Q9NPR9 543 aa14.92□□□□□ -0.02
PAAF1-215ENST00000544909 PCDH11XQ9BZA7 1347 aa14.91□□□□□ -0.02
PAAF1-215ENST00000544909 PCDH11YQ9BZA8 1340 aa14.91□□□□□ -0.02
PAAF1-215ENST00000544909 PAPPAQ13219 1627 aa14.91□□□□□ -0.02
PAAF1-215ENST00000544909 PRAMEF22A3QJZ6 481 aa14.91□□□□□ -0.02
PAAF1-215ENST00000544909 F13A1P00488 732 aa14.91□□□□□ -0.02
PAAF1-215ENST00000544909 SYT1P21579 422 aa14.91□□□□□ -0.02
PAAF1-215ENST00000544909 CREB3L3Q68CJ9 461 aa14.91□□□□□ -0.02
PAAF1-215ENST00000544909 JAKMIP1Q96N16 626 aaKnown RBP14.91□□□□□ -0.02
PAAF1-215ENST00000544909 RBM8AQ9Y5S9 174 aaKnown RBP14.91□□□□□ -0.02
PAAF1-215ENST00000544909 SPEF2Q9C093 1822 aa14.91□□□□□ -0.02
PAAF1-215ENST00000544909 ERVV-2B6SEH9 535 aa14.9□□□□□ -0.02
PAAF1-215ENST00000544909 CYP27B1O15528 508 aa14.9□□□□□ -0.02
PAAF1-215ENST00000544909 RFX5P48382 616 aaPredicted RBP14.9□□□□□ -0.02
PAAF1-215ENST00000544909 TERF1P54274 439 aa14.9□□□□□ -0.02
PAAF1-215ENST00000544909 CCDC183Q5T5S1 534 aa14.9□□□□□ -0.02
PAAF1-215ENST00000544909 RBSNQ9H1K0 784 aa14.9□□□□□ -0.02
PAAF1-215ENST00000544909 ATG3Q9NT62 314 aa14.9□□□□□ -0.02
PAAF1-215ENST00000544909 NOL7Q9UMY1 257 aaKnown RBP14.9□□□□□ -0.02
PAAF1-215ENST00000544909 AFDNP55196 1824 aaKnown RBP14.9□□□□□ -0.02
PAAF1-215ENST00000544909 PTH1RQ03431 593 aa14.89□□□□□ -0.03
PAAF1-215ENST00000544909 PRPF40BQ6NWY9 871 aaKnown RBP14.89□□□□□ -0.03
PAAF1-215ENST00000544909 FSD1Q9BTV5 496 aa14.89□□□□□ -0.03
PAAF1-215ENST00000544909 TSPY26PQ9H489 355 aa14.89□□□□□ -0.03
PAAF1-215ENST00000544909 STRCP1A6NGW2 1772 aa14.89□□□□□ -0.03
PAAF1-215ENST00000544909 ELP1O95163 1332 aa14.89□□□□□ -0.03
PAAF1-215ENST00000544909 SYCE3A1L190 88 aa14.89□□□□□ -0.03
PAAF1-215ENST00000544909 CSB-PGBD3P0DP91 1061 aa14.89□□□□□ -0.03
PAAF1-215ENST00000544909 PTPN12Q05209 780 aaKnown RBP14.89□□□□□ -0.03
PAAF1-215ENST00000544909 AIMP1Q12904 312 aaKnown RBP14.89□□□□□ -0.03
PAAF1-215ENST00000544909 NMIQ13287 307 aaPredicted RBP14.89□□□□□ -0.03
PAAF1-215ENST00000544909 NKX1-1Q15270 411 aaPredicted RBP14.89□□□□□ -0.03
PAAF1-215ENST00000544909 MYD88Q99836 296 aa14.89□□□□□ -0.03
PAAF1-215ENST00000544909 FBXO3Q9UK99 471 aa14.89□□□□□ -0.03
PAAF1-215ENST00000544909 SLC27A2O14975 620 aa14.88□□□□□ -0.03
PAAF1-215ENST00000544909 MSNP26038 577 aaKnown RBP14.88□□□□□ -0.03
PAAF1-215ENST00000544909 CASP7P55210 303 aa14.88□□□□□ -0.03
PAAF1-215ENST00000544909 CABP4P57796 275 aa14.88□□□□□ -0.03
PAAF1-215ENST00000544909 SLC39A6Q13433 755 aa14.88□□□□□ -0.03
PAAF1-215ENST00000544909 TNNI3KQ59H18 835 aa14.88□□□□□ -0.03
PAAF1-215ENST00000544909 CHMP4CQ96CF2 233 aa14.88□□□□□ -0.03
PAAF1-215ENST00000544909 FPGT-TNNI3KV9GXZ4 949 aa14.88□□□□□ -0.03
PAAF1-215ENST00000544909 WDR17Q8IZU2 1322 aa14.88□□□□□ -0.03
PAAF1-215ENST00000544909 TNS2Q63HR2 1409 aa14.88□□□□□ -0.03
PAAF1-215ENST00000544909 PALLDQ8WX93 1383 aa14.87□□□□□ -0.03
PAAF1-215ENST00000544909 ZNF500O60304 480 aaPredicted RBP14.87□□□□□ -0.03
PAAF1-215ENST00000544909 KCNJ4P48050 445 aa14.87□□□□□ -0.03
PAAF1-215ENST00000544909 BLOC1S2Q6QNY1 142 aa14.87□□□□□ -0.03
PAAF1-215ENST00000544909 USP48Q86UV5 1035 aa14.87□□□□□ -0.03
PAAF1-215ENST00000544909 NUP188Q5SRE5 1749 aa14.87□□□□□ -0.03
PAAF1-215ENST00000544909 NOL8Q76FK4 1167 aaKnown RBP14.87□□□□□ -0.03
PAAF1-215ENST00000544909 HAUS7Q99871 368 aa14.87□□□□□ -0.03
PAAF1-215ENST00000544909 CCDC39Q9UFE4 941 aa14.87□□□□□ -0.03
PAAF1-215ENST00000544909 MTMR6Q9Y217 621 aa14.87□□□□□ -0.03
PAAF1-215ENST00000544909 U3KPZ7 1027 aaPredicted RBP14.87□□□□□ -0.03
PAAF1-215ENST00000544909 SH3TC1Q8TE82 1336 aa14.86□□□□□ -0.03
PAAF1-215ENST00000544909 HMGB1P09429 215 aaKnown RBP14.86□□□□□ -0.03
PAAF1-215ENST00000544909 MYL6BP14649 208 aa14.86□□□□□ -0.03
PAAF1-215ENST00000544909 RPS6KB1P23443 525 aa14.86□□□□□ -0.03
PAAF1-215ENST00000544909 GJB2P29033 226 aa14.86□□□□□ -0.03
PAAF1-215ENST00000544909 ADCK5Q3MIX3 580 aa14.86□□□□□ -0.03
PAAF1-215ENST00000544909 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.86□□□□□ -0.03
PAAF1-215ENST00000544909 RBM27Q9P2N5 1060 aaKnown RBP14.86□□□□□ -0.03
PAAF1-215ENST00000544909 USP16Q9Y5T5 823 aa14.86□□□□□ -0.03
PAAF1-215ENST00000544909 A0A0D9SFI3 127 aa14.85□□□□□ -0.03
PAAF1-215ENST00000544909 H7C1W4 665 aa14.85□□□□□ -0.03
PAAF1-215ENST00000544909 TAF5LO75529 589 aa14.85□□□□□ -0.03
PAAF1-215ENST00000544909 FAM227BQ96M60 508 aa14.85□□□□□ -0.03
PAAF1-215ENST00000544909 CCDC8Q9H0W5 538 aaPredicted RBP14.85□□□□□ -0.03
PAAF1-215ENST00000544909 DBNLQ9UJU6 430 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms