RNA–Protein interactions for RNA: ENST00000544409.5

LRTOMT-221, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-221ENST00000544409 FMNL2Q96PY5 1086 aa14.74□□□□□ -0.05
LRTOMT-221ENST00000544409 HIP1O00291 1037 aa14.74□□□□□ -0.05
LRTOMT-221ENST00000544409 RASEFQ8IZ41 740 aa14.74□□□□□ -0.05
LRTOMT-221ENST00000544409 TTC14Q96N46 770 aa14.74□□□□□ -0.05
LRTOMT-221ENST00000544409 PPP1R9BQ96SB3 815 aa14.74□□□□□ -0.05
LRTOMT-221ENST00000544409 CYP27B1O15528 508 aa14.73□□□□□ -0.05
LRTOMT-221ENST00000544409 TERF1P54274 439 aa14.73□□□□□ -0.05
LRTOMT-221ENST00000544409 ANKRD13DQ6ZTN6 518 aa14.73□□□□□ -0.05
LRTOMT-221ENST00000544409 GPT2Q8TD30 523 aa14.73□□□□□ -0.05
LRTOMT-221ENST00000544409 EAF2Q96CJ1 260 aaPredicted RBP14.73□□□□□ -0.05
LRTOMT-221ENST00000544409 SPATA31A3Q5VYP0 1347 aa14.73□□□□□ -0.05
LRTOMT-221ENST00000544409 AFDNP55196 1824 aaKnown RBP14.73□□□□□ -0.05
LRTOMT-221ENST00000544409 BCL11BQ9C0K0 894 aaPredicted RBP14.73□□□□□ -0.05
LRTOMT-221ENST00000544409 CCDC8Q9H0W5 538 aaPredicted RBP14.73□□□□□ -0.05
LRTOMT-221ENST00000544409 SIL1Q9H173 461 aa14.73□□□□□ -0.05
LRTOMT-221ENST00000544409 USP16Q9Y5T5 823 aa14.73□□□□□ -0.05
LRTOMT-221ENST00000544409 WDR33Q9C0J8 1336 aaKnown RBP14.72□□□□□ -0.05
LRTOMT-221ENST00000544409 MBD3O95983 291 aa14.72□□□□□ -0.05
LRTOMT-221ENST00000544409 CABP4P57796 275 aa14.72□□□□□ -0.05
LRTOMT-221ENST00000544409 LIMCH1Q9UPQ0 1083 aa14.72□□□□□ -0.05
LRTOMT-221ENST00000544409 CPDO75976 1380 aa14.72□□□□□ -0.05
LRTOMT-221ENST00000544409 AK2P54819 239 aa14.72□□□□□ -0.05
LRTOMT-221ENST00000544409 PTH1RQ03431 593 aa14.71□□□□□ -0.05
LRTOMT-221ENST00000544409 CHAMP1Q96JM3 812 aa14.71□□□□□ -0.05
LRTOMT-221ENST00000544409 CASTP20810 708 aaKnown RBP14.71□□□□□ -0.05
LRTOMT-221ENST00000544409 LRP10Q7Z4F1 713 aa14.71□□□□□ -0.05
LRTOMT-221ENST00000544409 LAMB4A4D0S4 1761 aa14.71□□□□□ -0.05
LRTOMT-221ENST00000544409 PARP4Q9UKK3 1724 aaKnown RBP14.71□□□□□ -0.06
LRTOMT-221ENST00000544409 PRPF40BQ6NWY9 871 aaKnown RBP14.71□□□□□ -0.06
LRTOMT-221ENST00000544409 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.71□□□□□ -0.06
LRTOMT-221ENST00000544409 CCDC171Q6TFL3 1326 aa14.7□□□□□ -0.06
LRTOMT-221ENST00000544409 ARFGEF2Q9Y6D5 1785 aa14.7□□□□□ -0.06
LRTOMT-221ENST00000544409 EPHA10Q5JZY3 1008 aa14.7□□□□□ -0.06
LRTOMT-221ENST00000544409 KCNB2Q92953 911 aa14.7□□□□□ -0.06
LRTOMT-221ENST00000544409 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.7□□□□□ -0.06
LRTOMT-221ENST00000544409 RUFY3Q7L099 469 aa14.7□□□□□ -0.06
LRTOMT-221ENST00000544409 TM6SF1Q9BZW5 370 aa14.7□□□□□ -0.06
LRTOMT-221ENST00000544409 RBM27Q9P2N5 1060 aaKnown RBP14.7□□□□□ -0.06
LRTOMT-221ENST00000544409 KLHDC4Q8TBB5 520 aa14.69□□□□□ -0.06
LRTOMT-221ENST00000544409 TLR7Q9NYK1 1049 aaKnown RBP14.69□□□□□ -0.06
LRTOMT-221ENST00000544409 PIP4K2AP48426 406 aaPredicted RBP14.69□□□□□ -0.06
LRTOMT-221ENST00000544409 NMIQ13287 307 aaPredicted RBP14.69□□□□□ -0.06
LRTOMT-221ENST00000544409 JAKMIP1Q96N16 626 aaKnown RBP14.69□□□□□ -0.06
LRTOMT-221ENST00000544409 COPRSQ9NQ92 184 aa14.69□□□□□ -0.06
LRTOMT-221ENST00000544409 ZKSCAN1P17029 563 aaPredicted RBP14.69□□□□□ -0.06
LRTOMT-221ENST00000544409 DMTNQ08495 405 aa14.69□□□□□ -0.06
LRTOMT-221ENST00000544409 VPS53Q5VIR6 699 aa14.69□□□□□ -0.06
LRTOMT-221ENST00000544409 FSD1Q9BTV5 496 aa14.69□□□□□ -0.06
LRTOMT-221ENST00000544409 BOLA2Q9H3K6 86 aa14.69□□□□□ -0.06
LRTOMT-221ENST00000544409 PDRG1Q9NUG6 133 aa14.69□□□□□ -0.06
LRTOMT-221ENST00000544409 CYP46A1Q9Y6A2 500 aa14.69□□□□□ -0.06
LRTOMT-221ENST00000544409 COL15A1P39059 1388 aa14.68□□□□□ -0.06
LRTOMT-221ENST00000544409 RPAP1Q9BWH6 1393 aaPredicted RBP14.68□□□□□ -0.06
LRTOMT-221ENST00000544409 KCNJ4P48050 445 aa14.68□□□□□ -0.06
LRTOMT-221ENST00000544409 NECTIN1Q15223 517 aa14.68□□□□□ -0.06
LRTOMT-221ENST00000544409 ZSCAN20P17040 1043 aaPredicted RBP14.68□□□□□ -0.06
LRTOMT-221ENST00000544409 FAM227BQ96M60 508 aa14.68□□□□□ -0.06
LRTOMT-221ENST00000544409 ZSWIM6Q9HCJ5 1215 aa14.68□□□□□ -0.06
LRTOMT-221ENST00000544409 TMEM63CQ9P1W3 806 aa14.68□□□□□ -0.06
LRTOMT-221ENST00000544409 RBM8AQ9Y5S9 174 aaKnown RBP14.68□□□□□ -0.06
LRTOMT-221ENST00000544409 UBE3BQ7Z3V4 1068 aa14.67□□□□□ -0.06
LRTOMT-221ENST00000544409 MTERF4Q7Z6M4 381 aaKnown RBP14.67□□□□□ -0.06
LRTOMT-221ENST00000544409 PLBD2Q8NHP8 589 aa14.67□□□□□ -0.06
LRTOMT-221ENST00000544409 ZSCAN31Q96LW9 406 aaPredicted RBP14.67□□□□□ -0.06
LRTOMT-221ENST00000544409 SNRKQ9NRH2 765 aa14.67□□□□□ -0.06
LRTOMT-221ENST00000544409 SMC3Q9UQE7 1217 aa14.67□□□□□ -0.06
LRTOMT-221ENST00000544409 CPA1P15085 419 aa14.67□□□□□ -0.06
LRTOMT-221ENST00000544409 NSFL1CQ9UNZ2 370 aaKnown RBP14.67□□□□□ -0.06
LRTOMT-221ENST00000544409 DYNC1I1O14576 645 aa14.67□□□□□ -0.06
LRTOMT-221ENST00000544409 GTF2E1P29083 439 aaPredicted RBP14.67□□□□□ -0.06
LRTOMT-221ENST00000544409 RFX5P48382 616 aaPredicted RBP14.67□□□□□ -0.06
LRTOMT-221ENST00000544409 ADCK5Q3MIX3 580 aa14.67□□□□□ -0.06
LRTOMT-221ENST00000544409 MAP4K1Q92918 833 aa14.67□□□□□ -0.06
LRTOMT-221ENST00000544409 GLI3P10071 1580 aa14.66□□□□□ -0.06
LRTOMT-221ENST00000544409 A0A087WZG4 1122 aa14.66□□□□□ -0.06
LRTOMT-221ENST00000544409 RABL6Q3YEC7 729 aaPredicted RBP14.66□□□□□ -0.06
LRTOMT-221ENST00000544409 CREB3L3Q68CJ9 461 aa14.66□□□□□ -0.06
LRTOMT-221ENST00000544409 LRSAM1Q6UWE0 723 aa14.66□□□□□ -0.06
LRTOMT-221ENST00000544409 JARID2Q92833 1246 aaPredicted RBP14.66□□□□□ -0.06
LRTOMT-221ENST00000544409 SYAP1Q96A49 352 aaPredicted RBP14.66□□□□□ -0.06
LRTOMT-221ENST00000544409 LARP6Q9BRS8 491 aaKnown RBP14.66□□□□□ -0.06
LRTOMT-221ENST00000544409 SH2B1Q9NRF2 756 aaPredicted RBP14.66□□□□□ -0.06
LRTOMT-221ENST00000544409 PRIM1P49642 420 aaKnown RBP14.66□□□□□ -0.06
LRTOMT-221ENST00000544409 PTPN12Q05209 780 aaKnown RBP14.66□□□□□ -0.06
LRTOMT-221ENST00000544409 PCDH11XQ9BZA7 1347 aa14.66□□□□□ -0.06
LRTOMT-221ENST00000544409 PCDH11YQ9BZA8 1340 aa14.66□□□□□ -0.06
LRTOMT-221ENST00000544409 ATP5J2-PTCD1G3V325 749 aa14.65□□□□□ -0.06
LRTOMT-221ENST00000544409 PTCD1O75127 700 aaKnown RBP14.65□□□□□ -0.06
LRTOMT-221ENST00000544409 RBSNQ9H1K0 784 aa14.65□□□□□ -0.06
LRTOMT-221ENST00000544409 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.65□□□□□ -0.06
LRTOMT-221ENST00000544409 NOL7Q9UMY1 257 aaKnown RBP14.65□□□□□ -0.06
LRTOMT-221ENST00000544409 A0A0D9SFI3 127 aa14.65□□□□□ -0.06
LRTOMT-221ENST00000544409 ZSCAN22P10073 491 aaPredicted RBP14.65□□□□□ -0.06
LRTOMT-221ENST00000544409 PSMA5P28066 241 aa14.65□□□□□ -0.06
LRTOMT-221ENST00000544409 TNNI3KQ59H18 835 aa14.65□□□□□ -0.06
LRTOMT-221ENST00000544409 RNF20Q5VTR2 975 aa14.65□□□□□ -0.06
LRTOMT-221ENST00000544409 FPGT-TNNI3KV9GXZ4 949 aa14.65□□□□□ -0.06
LRTOMT-221ENST00000544409 WDR17Q8IZU2 1322 aa14.65□□□□□ -0.06
LRTOMT-221ENST00000544409 XIRP1Q702N8 1843 aaKnown RBP14.65□□□□□ -0.06
LRTOMT-221ENST00000544409 STX6O43752 255 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms