RNA–Protein interactions for RNA: ENST00000543814.5

PAAF1-213, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 5

Gene PAAF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-213ENST00000543814 GRIPAP1Q4V328 841 aa22.86■■□□□ 1.25
PAAF1-213ENST00000543814 CIAPIN1Q6FI81 312 aa22.86■■□□□ 1.25
PAAF1-213ENST00000543814 GAS2L2Q8NHY3 880 aa22.86■■□□□ 1.25
PAAF1-213ENST00000543814 ADARB2Q9NS39 739 aaKnown RBP22.86■■□□□ 1.25
PAAF1-213ENST00000543814 CEMIPQ8WUJ3 1361 aa22.86■■□□□ 1.25
PAAF1-213ENST00000543814 BTBD11A6QL63 1104 aa22.85■■□□□ 1.25
PAAF1-213ENST00000543814 AMER1Q5JTC6 1135 aaPredicted RBP22.85■■□□□ 1.25
PAAF1-213ENST00000543814 GPRC5DQ9NZD1 345 aa22.85■■□□□ 1.25
PAAF1-213ENST00000543814 PRAMEF22A3QJZ6 481 aa22.84■■□□□ 1.25
PAAF1-213ENST00000543814 GTF2E1P29083 439 aaPredicted RBP22.84■■□□□ 1.25
PAAF1-213ENST00000543814 GLIS2Q9BZE0 524 aaPredicted RBP22.83■■□□□ 1.25
PAAF1-213ENST00000543814 PGAP2Q9UHJ9 254 aa22.83■■□□□ 1.25
PAAF1-213ENST00000543814 TIMELESSQ9UNS1 1208 aa22.83■■□□□ 1.25
PAAF1-213ENST00000543814 NBPF26B4DH59 902 aa22.82■■□□□ 1.24
PAAF1-213ENST00000543814 HOXA10P31260 410 aaPredicted RBP22.82■■□□□ 1.24
PAAF1-213ENST00000543814 HLFQ16534 295 aa22.82■■□□□ 1.24
PAAF1-213ENST00000543814 NBPF10Q6P3W6 841 aaKnown RBP22.82■■□□□ 1.24
PAAF1-213ENST00000543814 NIM1KQ8IY84 436 aa22.82■■□□□ 1.24
PAAF1-213ENST00000543814 NBPF15Q8N660 670 aa22.82■■□□□ 1.24
PAAF1-213ENST00000543814 ABCC12Q96J65 1359 aa22.81■■□□□ 1.24
PAAF1-213ENST00000543814 SOX10P56693 466 aa22.81■■□□□ 1.24
PAAF1-213ENST00000543814 NOGQ13253 232 aa22.81■■□□□ 1.24
PAAF1-213ENST00000543814 PRPF38BQ5VTL8 546 aaKnown RBP22.81■■□□□ 1.24
PAAF1-213ENST00000543814 ZIC5Q96T25 663 aa22.81■■□□□ 1.24
PAAF1-213ENST00000543814 PDE4DIPQ5VU43 2346 aa22.8■■□□□ 1.24
PAAF1-213ENST00000543814 SNRPA1P09661 255 aaKnown RBP22.8■■□□□ 1.24
PAAF1-213ENST00000543814 HSPA5P11021 654 aaKnown RBP22.79■■□□□ 1.24
PAAF1-213ENST00000543814 EIF4G2P78344 907 aaKnown RBP eCLIP22.79■■□□□ 1.24
PAAF1-213ENST00000543814 SLC51AQ86UW1 340 aa22.79■■□□□ 1.24
PAAF1-213ENST00000543814 NUTM1Q86Y26 1132 aa22.78■■□□□ 1.24
PAAF1-213ENST00000543814 RPGRQ92834 1020 aaKnown RBP22.78■■□□□ 1.24
PAAF1-213ENST00000543814 NYXQ9GZU5 481 aa22.78■■□□□ 1.24
PAAF1-213ENST00000543814 KIF7Q2M1P5 1343 aa22.78■■□□□ 1.24
PAAF1-213ENST00000543814 NPC1L1Q9UHC9 1359 aa22.77■■□□□ 1.24
PAAF1-213ENST00000543814 CXCL9Q07325 125 aa22.77■■□□□ 1.24
PAAF1-213ENST00000543814 ZC3H15Q8WU90 426 aaKnown RBP22.77■■□□□ 1.24
PAAF1-213ENST00000543814 CRAMP1Q96RY5 1269 aa22.77■■□□□ 1.24
PAAF1-213ENST00000543814 VPS33BQ9H267 617 aa22.77■■□□□ 1.24
PAAF1-213ENST00000543814 ZNF408Q9H9D4 720 aa22.77■■□□□ 1.24
PAAF1-213ENST00000543814 RIC1Q4ADV7 1423 aa22.76■■□□□ 1.23
PAAF1-213ENST00000543814 PPIP5K2O43314 1243 aa22.76■■□□□ 1.23
PAAF1-213ENST00000543814 PPEF1O14829 653 aaPredicted RBP22.75■■□□□ 1.23
PAAF1-213ENST00000543814 U2SURPO15042 1029 aaKnown RBP22.75■■□□□ 1.23
PAAF1-213ENST00000543814 GMPSP49915 693 aaPredicted RBP22.75■■□□□ 1.23
PAAF1-213ENST00000543814 HIRAP54198 1017 aaPredicted RBP22.75■■□□□ 1.23
PAAF1-213ENST00000543814 AOC3Q16853 763 aa22.75■■□□□ 1.23
PAAF1-213ENST00000543814 CDC37L1Q7L3B6 337 aa22.75■■□□□ 1.23
PAAF1-213ENST00000543814 SAGE1Q9NXZ1 904 aa22.75■■□□□ 1.23
PAAF1-213ENST00000543814 ZNRF3Q9ULT6 936 aa22.75■■□□□ 1.23
PAAF1-213ENST00000543814 COL3A1P02461 1466 aaPredicted RBP22.74■■□□□ 1.23
PAAF1-213ENST00000543814 CDHR2Q9BYE9 1310 aa22.74■■□□□ 1.23
PAAF1-213ENST00000543814 TCERG1O14776 1098 aaKnown RBP22.73■■□□□ 1.23
PAAF1-213ENST00000543814 HUNKP57058 714 aa22.73■■□□□ 1.23
PAAF1-213ENST00000543814 RBM17Q96I25 401 aaKnown RBP22.73■■□□□ 1.23
PAAF1-213ENST00000543814 FAM155AB1AL88 458 aaPredicted RBP22.72■■□□□ 1.23
PAAF1-213ENST00000543814 PHACTR3Q96KR7 559 aa22.72■■□□□ 1.23
PAAF1-213ENST00000543814 ERVV-1B6SEH8 477 aa22.71■■□□□ 1.23
PAAF1-213ENST00000543814 TRPM4Q8TD43 1214 aa22.7■■□□□ 1.22
PAAF1-213ENST00000543814 IBTKQ9P2D0 1353 aaPredicted RBP22.7■■□□□ 1.22
PAAF1-213ENST00000543814 RGMBQ6NW40 437 aa22.69■■□□□ 1.22
PAAF1-213ENST00000543814 USP48Q86UV5 1035 aa22.69■■□□□ 1.22
PAAF1-213ENST00000543814 RTFDC1Q9BY42 306 aaPredicted RBP22.69■■□□□ 1.22
PAAF1-213ENST00000543814 ATP6V0A2Q9Y487 856 aa22.69■■□□□ 1.22
PAAF1-213ENST00000543814 SUPT20HQ8NEM7 779 aa22.68■■□□□ 1.22
PAAF1-213ENST00000543814 BCL2L13Q9BXK5 485 aa22.68■■□□□ 1.22
PAAF1-213ENST00000543814 RNF186Q9NXI6 227 aa22.68■■□□□ 1.22
PAAF1-213ENST00000543814 MAP3K15Q6ZN16 1313 aa22.67■■□□□ 1.22
PAAF1-213ENST00000543814 UBN2Q6ZU65 1347 aa22.67■■□□□ 1.22
PAAF1-213ENST00000543814 TRPA1O75762 1119 aa22.67■■□□□ 1.22
PAAF1-213ENST00000543814 KIF23Q02241 960 aaPredicted RBP22.67■■□□□ 1.22
PAAF1-213ENST00000543814 DLK2Q6UY11 383 aa22.67■■□□□ 1.22
PAAF1-213ENST00000543814 C3orf67Q6ZVT6 689 aa22.67■■□□□ 1.22
PAAF1-213ENST00000543814 CCDC102AQ96A19 550 aa22.67■■□□□ 1.22
PAAF1-213ENST00000543814 TMX4Q9H1E5 349 aaPredicted RBP22.67■■□□□ 1.22
PAAF1-213ENST00000543814 NUP98P52948 1817 aa22.66■■□□□ 1.22
PAAF1-213ENST00000543814 PER1O15534 1290 aaPredicted RBP22.66■■□□□ 1.22
PAAF1-213ENST00000543814 TNIP1Q15025 636 aa22.66■■□□□ 1.22
PAAF1-213ENST00000543814 SUSD4Q5VX71 490 aa22.66■■□□□ 1.22
PAAF1-213ENST00000543814 CTU1Q7Z7A3 348 aaKnown RBP22.66■■□□□ 1.22
PAAF1-213ENST00000543814 CNOT7Q9UIV1 285 aaKnown RBP22.66■■□□□ 1.22
PAAF1-213ENST00000543814 GPTP24298 496 aa22.65■■□□□ 1.22
PAAF1-213ENST00000543814 PRKAR2BP31323 418 aa22.65■■□□□ 1.22
PAAF1-213ENST00000543814 CC2D1BQ5T0F9 858 aaKnown RBP22.65■■□□□ 1.22
PAAF1-213ENST00000543814 MCM10Q7L590 875 aa22.65■■□□□ 1.22
PAAF1-213ENST00000543814 SHTN1A0MZ66 631 aa22.64■■□□□ 1.21
PAAF1-213ENST00000543814 RAD17O75943 681 aa22.64■■□□□ 1.21
PAAF1-213ENST00000543814 NTSR2O95665 410 aa22.64■■□□□ 1.21
PAAF1-213ENST00000543814 KIAA2012Q0VF49 1180 aa22.64■■□□□ 1.21
PAAF1-213ENST00000543814 NGEFQ8N5V2 710 aa22.64■■□□□ 1.21
PAAF1-213ENST00000543814 RTF1Q92541 710 aaKnown RBP22.64■■□□□ 1.21
PAAF1-213ENST00000543814 H7C1D1 291 aa22.63■■□□□ 1.21
PAAF1-213ENST00000543814 TTLL7Q6ZT98 887 aa22.63■■□□□ 1.21
PAAF1-213ENST00000543814 ZNF34Q8IZ26 560 aa22.63■■□□□ 1.21
PAAF1-213ENST00000543814 RSPH6AQ9H0K4 717 aa22.63■■□□□ 1.21
PAAF1-213ENST00000543814 GBA2Q9HCG7 927 aaPredicted RBP22.63■■□□□ 1.21
PAAF1-213ENST00000543814 ZNF157P51786 506 aaPredicted RBP22.62■■□□□ 1.21
PAAF1-213ENST00000543814 C2orf69Q8N8R5 385 aa22.62■■□□□ 1.21
PAAF1-213ENST00000543814 NLRP3Q96P20 1036 aa22.62■■□□□ 1.21
PAAF1-213ENST00000543814 LAMB4A4D0S4 1761 aa22.62■■□□□ 1.21
PAAF1-213ENST00000543814 DPP8Q6V1X1 898 aaPredicted RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms