RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 ATP5J2-PTCD1G3V325 749 aa19.42■□□□□ 0.7
SCNN1A-221ENST00000543768 PTCD1O75127 700 aaKnown RBP19.42■□□□□ 0.7
SCNN1A-221ENST00000543768 UBE3BQ7Z3V4 1068 aa19.42■□□□□ 0.7
SCNN1A-221ENST00000543768 SLAIN2Q9P270 581 aa19.42■□□□□ 0.7
SCNN1A-221ENST00000543768 NBPF26B4DH59 902 aa19.42■□□□□ 0.7
SCNN1A-221ENST00000543768 PRPF40AO75400 957 aaKnown RBP19.42■□□□□ 0.7
SCNN1A-221ENST00000543768 CASP7P55210 303 aa19.42■□□□□ 0.7
SCNN1A-221ENST00000543768 PTPN12Q05209 780 aaKnown RBP19.42■□□□□ 0.7
SCNN1A-221ENST00000543768 NBPF14Q5TI25 921 aa19.42■□□□□ 0.7
SCNN1A-221ENST00000543768 NBPF10Q6P3W6 841 aaKnown RBP19.42■□□□□ 0.7
SCNN1A-221ENST00000543768 NBPF15Q8N660 670 aa19.42■□□□□ 0.7
SCNN1A-221ENST00000543768 KCNB2Q92953 911 aa19.42■□□□□ 0.7
SCNN1A-221ENST00000543768 FOXD4L5Q5VV16 416 aaPredicted RBP19.41■□□□□ 0.7
SCNN1A-221ENST00000543768 FOXD4L4Q8WXT5 416 aaPredicted RBP19.41■□□□□ 0.7
SCNN1A-221ENST00000543768 ERVV-2B6SEH9 535 aa19.41■□□□□ 0.7
SCNN1A-221ENST00000543768 BOLA2Q9H3K6 86 aa19.41■□□□□ 0.7
SCNN1A-221ENST00000543768 ERBB4Q15303 1308 aa19.4■□□□□ 0.7
SCNN1A-221ENST00000543768 A0A087WZG4 1122 aa19.4■□□□□ 0.7
SCNN1A-221ENST00000543768 AK2P54819 239 aa19.4■□□□□ 0.7
SCNN1A-221ENST00000543768 NKX1-1Q15270 411 aaPredicted RBP19.4■□□□□ 0.7
SCNN1A-221ENST00000543768 FAM227BQ96M60 508 aa19.4■□□□□ 0.7
SCNN1A-221ENST00000543768 RRAGDQ9NQL2 400 aaPredicted RBP19.4■□□□□ 0.7
SCNN1A-221ENST00000543768 NECTIN1Q15223 517 aa19.4■□□□□ 0.7
SCNN1A-221ENST00000543768 RUFY3Q7L099 469 aa19.4■□□□□ 0.7
SCNN1A-221ENST00000543768 SNRKQ9NRH2 765 aa19.4■□□□□ 0.7
SCNN1A-221ENST00000543768 ABCA3Q99758 1704 aa19.4■□□□□ 0.7
SCNN1A-221ENST00000543768 SHANK3Q9BYB0 1731 aa19.4■□□□□ 0.7
SCNN1A-221ENST00000543768 CCDC171Q6TFL3 1326 aa19.39■□□□□ 0.69
SCNN1A-221ENST00000543768 HIP1O00291 1037 aa19.39■□□□□ 0.69
SCNN1A-221ENST00000543768 NMIQ13287 307 aaPredicted RBP19.39■□□□□ 0.69
SCNN1A-221ENST00000543768 GPT2Q8TD30 523 aa19.39■□□□□ 0.69
SCNN1A-221ENST00000543768 ADCK5Q3MIX3 580 aa19.39■□□□□ 0.69
SCNN1A-221ENST00000543768 PRPF40BQ6NWY9 871 aaKnown RBP19.39■□□□□ 0.69
SCNN1A-221ENST00000543768 CARD10Q9BWT7 1032 aa19.39■□□□□ 0.69
SCNN1A-221ENST00000543768 KCPQ6ZWJ8 1503 aa19.39■□□□□ 0.69
SCNN1A-221ENST00000543768 PAPPAQ13219 1627 aa19.38■□□□□ 0.69
SCNN1A-221ENST00000543768 CPA1P15085 419 aa19.38■□□□□ 0.69
SCNN1A-221ENST00000543768 CASTP20810 708 aaKnown RBP19.38■□□□□ 0.69
SCNN1A-221ENST00000543768 CAVIN1Q6NZI2 390 aaKnown RBP19.38■□□□□ 0.69
SCNN1A-221ENST00000543768 NUP188Q5SRE5 1749 aa19.38■□□□□ 0.69
SCNN1A-221ENST00000543768 IL2RBP14784 551 aa19.37■□□□□ 0.69
SCNN1A-221ENST00000543768 NCLP19338 710 aaKnown RBP19.37■□□□□ 0.69
SCNN1A-221ENST00000543768 ZNF445P59923 1031 aa19.37■□□□□ 0.69
SCNN1A-221ENST00000543768 MAP4K1Q92918 833 aa19.37■□□□□ 0.69
SCNN1A-221ENST00000543768 LIMCH1Q9UPQ0 1083 aa19.37■□□□□ 0.69
SCNN1A-221ENST00000543768 ZNF335Q9H4Z2 1342 aaPredicted RBP19.37■□□□□ 0.69
SCNN1A-221ENST00000543768 TFCP2Q12800 502 aa19.37■□□□□ 0.69
SCNN1A-221ENST00000543768 TTLL7Q6ZT98 887 aa19.37■□□□□ 0.69
SCNN1A-221ENST00000543768 TM6SF1Q9BZW5 370 aa19.37■□□□□ 0.69
SCNN1A-221ENST00000543768 TNNI3KQ59H18 835 aa19.36■□□□□ 0.69
SCNN1A-221ENST00000543768 LARP6Q9BRS8 491 aaKnown RBP19.36■□□□□ 0.69
SCNN1A-221ENST00000543768 ZSWIM6Q9HCJ5 1215 aa19.36■□□□□ 0.69
SCNN1A-221ENST00000543768 DBNLQ9UJU6 430 aaKnown RBP19.36■□□□□ 0.69
SCNN1A-221ENST00000543768 FPGT-TNNI3KV9GXZ4 949 aa19.36■□□□□ 0.69
SCNN1A-221ENST00000543768 A0A0D9SFI3 127 aa19.36■□□□□ 0.69
SCNN1A-221ENST00000543768 H7C1W4 665 aa19.36■□□□□ 0.69
SCNN1A-221ENST00000543768 ZSCAN23Q3MJ62 389 aa19.36■□□□□ 0.69
SCNN1A-221ENST00000543768 RBM8AQ9Y5S9 174 aaKnown RBP19.36■□□□□ 0.69
SCNN1A-221ENST00000543768 A1BGP04217 495 aa19.35■□□□□ 0.69
SCNN1A-221ENST00000543768 JAKMIP1Q96N16 626 aaKnown RBP19.35■□□□□ 0.69
SCNN1A-221ENST00000543768 FSD1Q9BTV5 496 aa19.35■□□□□ 0.69
SCNN1A-221ENST00000543768 RPAP1Q9BWH6 1393 aaPredicted RBP19.35■□□□□ 0.69
SCNN1A-221ENST00000543768 ATP5JP18859 108 aa19.35■□□□□ 0.69
SCNN1A-221ENST00000543768 FOXO4P98177 505 aa19.35■□□□□ 0.69
SCNN1A-221ENST00000543768 VPS53Q5VIR6 699 aa19.35■□□□□ 0.69
SCNN1A-221ENST00000543768 DDX54Q8TDD1 881 aaKnown RBP19.35■□□□□ 0.69
SCNN1A-221ENST00000543768 CREB3L3Q68CJ9 461 aa19.34■□□□□ 0.69
SCNN1A-221ENST00000543768 LMBR1LQ6UX01 489 aa19.34■□□□□ 0.69
SCNN1A-221ENST00000543768 NSFL1CQ9UNZ2 370 aaKnown RBP19.34■□□□□ 0.69
SCNN1A-221ENST00000543768 MED23Q9ULK4 1368 aa19.34■□□□□ 0.69
SCNN1A-221ENST00000543768 EDC3Q96F86 508 aaKnown RBP19.34■□□□□ 0.69
SCNN1A-221ENST00000543768 TJP1Q07157 1748 aa19.34■□□□□ 0.69
SCNN1A-221ENST00000543768 WDR33Q9C0J8 1336 aaKnown RBP19.34■□□□□ 0.69
SCNN1A-221ENST00000543768 TNS2Q63HR2 1409 aa19.33■□□□□ 0.69
SCNN1A-221ENST00000543768 LARGE1O95461 756 aa19.33■□□□□ 0.69
SCNN1A-221ENST00000543768 STRN4Q9NRL3 753 aa19.33■□□□□ 0.69
SCNN1A-221ENST00000543768 PDRG1Q9NUG6 133 aa19.33■□□□□ 0.69
SCNN1A-221ENST00000543768 TCHHQ07283 1943 aa19.33■□□□□ 0.68
SCNN1A-221ENST00000543768 RBM27Q9P2N5 1060 aaKnown RBP19.33■□□□□ 0.68
SCNN1A-221ENST00000543768 CYP46A1Q9Y6A2 500 aa19.33■□□□□ 0.68
SCNN1A-221ENST00000543768 ZKSCAN1P17029 563 aaPredicted RBP19.32■□□□□ 0.68
SCNN1A-221ENST00000543768 GLIPR1L2Q4G1C9 344 aa19.32■□□□□ 0.68
SCNN1A-221ENST00000543768 CWC25Q9NXE8 425 aaPredicted RBP19.32■□□□□ 0.68
SCNN1A-221ENST00000543768 SLC27A2O14975 620 aa19.32■□□□□ 0.68
SCNN1A-221ENST00000543768 ZNF589Q86UQ0 364 aaPredicted RBP19.32■□□□□ 0.68
SCNN1A-221ENST00000543768 TMEM63CQ9P1W3 806 aa19.32■□□□□ 0.68
SCNN1A-221ENST00000543768 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.32■□□□□ 0.68
SCNN1A-221ENST00000543768 JCADQ9P266 1359 aa19.31■□□□□ 0.68
SCNN1A-221ENST00000543768 TOGARAM1Q9Y4F4 1720 aa19.31■□□□□ 0.68
SCNN1A-221ENST00000543768 DBNDD2Q9BQY9 259 aa19.31■□□□□ 0.68
SCNN1A-221ENST00000543768 KCNJ4P48050 445 aa19.3■□□□□ 0.68
SCNN1A-221ENST00000543768 EVA1CP58658 441 aa19.3■□□□□ 0.68
SCNN1A-221ENST00000543768 COL9A3Q14050 684 aaPredicted RBP19.3■□□□□ 0.68
SCNN1A-221ENST00000543768 MBD3O95983 291 aa19.29■□□□□ 0.68
SCNN1A-221ENST00000543768 ATG9AQ7Z3C6 839 aa19.29■□□□□ 0.68
SCNN1A-221ENST00000543768 CCDC191Q8NCU4 936 aa19.29■□□□□ 0.68
SCNN1A-221ENST00000543768 PKNOX2Q96KN3 472 aa19.29■□□□□ 0.68
SCNN1A-221ENST00000543768 ZSCAN31Q96LW9 406 aaPredicted RBP19.29■□□□□ 0.68
SCNN1A-221ENST00000543768 ZBTB3Q9H5J0 574 aa19.29■□□□□ 0.68
SCNN1A-221ENST00000543768 NHSL1Q5SYE7 1610 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms