RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 CCDC112Q8NEF3 446 aa6.31□□□□□ -1.4
KDM3B-209ENST00000542866 IP6K1Q92551 441 aa6.31□□□□□ -1.4
KDM3B-209ENST00000542866 FUCA2Q9BTY2 467 aa6.31□□□□□ -1.4
KDM3B-209ENST00000542866 NUP62CLQ9H1M0 184 aa6.31□□□□□ -1.4
KDM3B-209ENST00000542866 OGFRQ9NZT2 677 aa6.31□□□□□ -1.4
KDM3B-209ENST00000542866 NCBP1Q09161 790 aaKnown RBP6.3□□□□□ -1.4
KDM3B-209ENST00000542866 FAM200AQ8TCP9 573 aa6.3□□□□□ -1.4
KDM3B-209ENST00000542866 SYTL4Q96C24 671 aaPredicted RBP6.3□□□□□ -1.4
KDM3B-209ENST00000542866 JAKMIP1Q96N16 626 aaKnown RBP6.3□□□□□ -1.4
KDM3B-209ENST00000542866 FEZ1Q99689 392 aa6.3□□□□□ -1.4
KDM3B-209ENST00000542866 BTG4Q9NY30 223 aa6.3□□□□□ -1.4
KDM3B-209ENST00000542866 DCAF8L1A6NGE4 600 aa6.3□□□□□ -1.4
KDM3B-209ENST00000542866 HOXC9P31274 260 aa6.3□□□□□ -1.4
KDM3B-209ENST00000542866 KCNJ4P48050 445 aa6.3□□□□□ -1.4
KDM3B-209ENST00000542866 TYRO3Q06418 890 aa6.3□□□□□ -1.4
KDM3B-209ENST00000542866 ANO6Q4KMQ2 910 aa6.3□□□□□ -1.4
KDM3B-209ENST00000542866 LARP1BQ659C4 914 aaKnown RBP6.3□□□□□ -1.4
KDM3B-209ENST00000542866 ZNF530Q6P9A1 599 aaPredicted RBP6.3□□□□□ -1.4
KDM3B-209ENST00000542866 PLCD3Q8N3E9 789 aa6.3□□□□□ -1.4
KDM3B-209ENST00000542866 TNMDQ9H2S6 317 aa6.3□□□□□ -1.4
KDM3B-209ENST00000542866 PDRG1Q9NUG6 133 aa6.3□□□□□ -1.4
KDM3B-209ENST00000542866 TFIP11Q9UBB9 837 aaKnown RBP6.3□□□□□ -1.4
KDM3B-209ENST00000542866 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.3□□□□□ -1.4
KDM3B-209ENST00000542866 KCNG1Q9UIX4 513 aa6.3□□□□□ -1.4
KDM3B-209ENST00000542866 MTMR6Q9Y217 621 aa6.3□□□□□ -1.4
KDM3B-209ENST00000542866 V9GYY5 206 aaPredicted RBP6.3□□□□□ -1.4
KDM3B-209ENST00000542866 SALL3Q9BXA9 1300 aa6.3□□□□□ -1.4
KDM3B-209ENST00000542866 MST1RQ04912 1400 aa6.3□□□□□ -1.4
KDM3B-209ENST00000542866 NPHP1O15259 732 aa6.3□□□□□ -1.4
KDM3B-209ENST00000542866 CTIFO43310 598 aaKnown RBP6.3□□□□□ -1.4
KDM3B-209ENST00000542866 UBTFL1P0CB47 393 aaPredicted RBP6.3□□□□□ -1.4
KDM3B-209ENST00000542866 LIG1P18858 919 aa6.3□□□□□ -1.4
KDM3B-209ENST00000542866 FLIIQ13045 1269 aa6.3□□□□□ -1.4
KDM3B-209ENST00000542866 OS9Q13438 667 aaPredicted RBP6.3□□□□□ -1.4
KDM3B-209ENST00000542866 PRPF40BQ6NWY9 871 aaKnown RBP6.3□□□□□ -1.4
KDM3B-209ENST00000542866 CNPY4Q8N129 248 aa6.3□□□□□ -1.4
KDM3B-209ENST00000542866 TCHHQ07283 1943 aa6.29□□□□□ -1.4
KDM3B-209ENST00000542866 SGSM2O43147 1006 aa6.29□□□□□ -1.4
KDM3B-209ENST00000542866 KRT85P78386 507 aa6.29□□□□□ -1.4
KDM3B-209ENST00000542866 CNTROBQ8N137 903 aa6.29□□□□□ -1.4
KDM3B-209ENST00000542866 RNF216Q9NWF9 866 aaPredicted RBP6.29□□□□□ -1.4
KDM3B-209ENST00000542866 STAP2Q9UGK3 403 aa6.29□□□□□ -1.4
KDM3B-209ENST00000542866 SBNO1A3KN83 1393 aa6.29□□□□□ -1.4
KDM3B-209ENST00000542866 CPSF1Q10570 1443 aaKnown RBP6.29□□□□□ -1.4
KDM3B-209ENST00000542866 SMTNL1A8MU46 457 aa6.29□□□□□ -1.4
KDM3B-209ENST00000542866 TTC14Q96N46 770 aa6.29□□□□□ -1.4
KDM3B-209ENST00000542866 CBX8Q9HC52 389 aa6.29□□□□□ -1.4
KDM3B-209ENST00000542866 DACT1Q9NYF0 836 aa6.29□□□□□ -1.4
KDM3B-209ENST00000542866 MRVI1Q9Y6F6 885 aa6.29□□□□□ -1.4
KDM3B-209ENST00000542866 RAD50Q92878 1312 aa6.29□□□□□ -1.4
KDM3B-209ENST00000542866 KIAA0232Q92628 1395 aa6.29□□□□□ -1.4
KDM3B-209ENST00000542866 SSH2Q76I76 1423 aa6.29□□□□□ -1.4
KDM3B-209ENST00000542866 TTC6Q86TZ1 520 aa6.29□□□□□ -1.4
KDM3B-209ENST00000542866 CLIP2Q9UDT6 1046 aa6.29□□□□□ -1.4
KDM3B-209ENST00000542866 CTNNA3Q9UI47 895 aa6.29□□□□□ -1.4
KDM3B-209ENST00000542866 CYP46A1Q9Y6A2 500 aa6.29□□□□□ -1.4
KDM3B-209ENST00000542866 TNS3Q68CZ2 1445 aa6.28□□□□□ -1.4
KDM3B-209ENST00000542866 HSPA1LP34931 641 aa6.28□□□□□ -1.4
KDM3B-209ENST00000542866 ADCK5Q3MIX3 580 aa6.28□□□□□ -1.4
KDM3B-209ENST00000542866 ZSCAN25Q6NSZ9 544 aa6.28□□□□□ -1.4
KDM3B-209ENST00000542866 PPP1R42Q7Z4L9 355 aa6.28□□□□□ -1.4
KDM3B-209ENST00000542866 ARHGEF25Q86VW2 580 aa6.28□□□□□ -1.4
KDM3B-209ENST00000542866 BICD2Q8TD16 824 aa6.28□□□□□ -1.4
KDM3B-209ENST00000542866 LSG1Q9H089 658 aaKnown RBP6.28□□□□□ -1.4
KDM3B-209ENST00000542866 MAP2P11137 1827 aaKnown RBP6.28□□□□□ -1.4
KDM3B-209ENST00000542866 ERICH4A6NGS2 130 aa6.28□□□□□ -1.4
KDM3B-209ENST00000542866 SOS2Q07890 1332 aaPredicted RBP6.28□□□□□ -1.4
KDM3B-209ENST00000542866 AMOTQ4VCS5 1084 aa6.28□□□□□ -1.4
KDM3B-209ENST00000542866 CCDC30Q5VVM6 783 aa6.28□□□□□ -1.4
KDM3B-209ENST00000542866 CEP135Q66GS9 1140 aa6.28□□□□□ -1.4
KDM3B-209ENST00000542866 CDC42BPGQ6DT37 1551 aa6.28□□□□□ -1.4
KDM3B-209ENST00000542866 TTC5Q8N0Z6 440 aa6.28□□□□□ -1.4
KDM3B-209ENST00000542866 RHPN1Q8TCX5 695 aa6.28□□□□□ -1.4
KDM3B-209ENST00000542866 TCEANC2Q96MN5 208 aa6.28□□□□□ -1.4
KDM3B-209ENST00000542866 DNAJC25Q9H1X3 360 aa6.28□□□□□ -1.4
KDM3B-209ENST00000542866 HYPKQ9NX55 129 aa6.28□□□□□ -1.4
KDM3B-209ENST00000542866 NRXN3Q9Y4C0 1643 aa6.28□□□□□ -1.4
KDM3B-209ENST00000542866 JCADQ9P266 1359 aa6.28□□□□□ -1.4
KDM3B-209ENST00000542866 SRGAP3O43295 1099 aa6.27□□□□□ -1.4
KDM3B-209ENST00000542866 ZNF165P49910 485 aa6.27□□□□□ -1.4
KDM3B-209ENST00000542866 ZNF75DP51815 510 aa6.27□□□□□ -1.4
KDM3B-209ENST00000542866 PTH1RQ03431 593 aa6.27□□□□□ -1.4
KDM3B-209ENST00000542866 STK3Q13188 491 aa6.27□□□□□ -1.4
KDM3B-209ENST00000542866 MTHFSDQ2M296 383 aaKnown RBP6.27□□□□□ -1.4
KDM3B-209ENST00000542866 SPATA32Q96LK8 384 aa6.27□□□□□ -1.4
KDM3B-209ENST00000542866 TRMT1Q9NXH9 659 aaKnown RBP6.27□□□□□ -1.4
KDM3B-209ENST00000542866 PAXBP1Q9Y5B6 917 aa6.27□□□□□ -1.4
KDM3B-209ENST00000542866 GOLGA6L19H0YKK7 550 aa6.27□□□□□ -1.41
KDM3B-209ENST00000542866 EXOC5O00471 708 aa6.27□□□□□ -1.41
KDM3B-209ENST00000542866 ME3Q16798 604 aa6.27□□□□□ -1.41
KDM3B-209ENST00000542866 CDC37L1Q7L3B6 337 aa6.27□□□□□ -1.41
KDM3B-209ENST00000542866 CACTINQ8WUQ7 758 aaKnown RBP6.27□□□□□ -1.41
KDM3B-209ENST00000542866 ZSCAN31Q96LW9 406 aaPredicted RBP6.27□□□□□ -1.41
KDM3B-209ENST00000542866 EYA1Q99502 592 aa6.27□□□□□ -1.41
KDM3B-209ENST00000542866 AATKQ6ZMQ8 1374 aa6.27□□□□□ -1.41
KDM3B-209ENST00000542866 ZKSCAN1P17029 563 aaPredicted RBP6.27□□□□□ -1.41
KDM3B-209ENST00000542866 EIF2S2P20042 333 aaKnown RBP6.27□□□□□ -1.41
KDM3B-209ENST00000542866 MAPK8IP2Q13387 824 aaPredicted RBP6.27□□□□□ -1.41
KDM3B-209ENST00000542866 TAF3Q5VWG9 929 aa6.27□□□□□ -1.41
KDM3B-209ENST00000542866 FILIP1Q7Z7B0 1213 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms