RNA–Protein interactions for RNA: ENST00000542832.1

DDX47-208, Transcript of DEAD-box helicase 47, human

TSL 5

Gene DDX47, Length 554 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX47-208	ENST00000542832	EIF5	P55010	431 aa	Known RBP	11.13	□□□□□ -0.63
DDX47-208	ENST00000542832	HSP90AB3P	Q58FF7	597 aa		11.13	□□□□□ -0.63
DDX47-208	ENST00000542832	CLEC4G	Q6UXB4	293 aa		11.13	□□□□□ -0.63
DDX47-208	ENST00000542832	COPS6	Q7L5N1	327 aa		11.13	□□□□□ -0.63
DDX47-208	ENST00000542832	G2E3	Q7L622	706 aa		11.13	□□□□□ -0.63
DDX47-208	ENST00000542832	DNAJC10	Q8IXB1	793 aa		11.13	□□□□□ -0.63
DDX47-208	ENST00000542832	PI4KAP1	Q8N8J0	262 aa		11.13	□□□□□ -0.63
DDX47-208	ENST00000542832	FBXO22	Q8NEZ5	403 aa		11.13	□□□□□ -0.63
DDX47-208	ENST00000542832	CLUAP1	Q96AJ1	413 aa		11.13	□□□□□ -0.63
DDX47-208	ENST00000542832	SLC4A9	Q96Q91	983 aa		11.13	□□□□□ -0.63
DDX47-208	ENST00000542832	SRCIN1	Q9C0H9	1055 aa		11.13	□□□□□ -0.63
DDX47-208	ENST00000542832	PHAX	Q9H814	394 aa	Known RBP	11.13	□□□□□ -0.63
DDX47-208	ENST00000542832	TOGARAM1	Q9Y4F4	1720 aa		11.12	□□□□□ -0.63
DDX47-208	ENST00000542832	ATP10D	Q9P241	1426 aa		11.12	□□□□□ -0.63
DDX47-208	ENST00000542832	PRAMEF22	A3QJZ6	481 aa		11.12	□□□□□ -0.63
DDX47-208	ENST00000542832	NBPF26	B4DH59	902 aa		11.12	□□□□□ -0.63
DDX47-208	ENST00000542832	A1BG	P04217	495 aa		11.12	□□□□□ -0.63
DDX47-208	ENST00000542832	RLBP1	P12271	317 aa		11.12	□□□□□ -0.63
DDX47-208	ENST00000542832	C20orf194	Q5TEA3	1177 aa		11.12	□□□□□ -0.63
DDX47-208	ENST00000542832	NBPF14	Q5TI25	921 aa		11.12	□□□□□ -0.63
DDX47-208	ENST00000542832	NBPF10	Q6P3W6	841 aa	Known RBP	11.12	□□□□□ -0.63
DDX47-208	ENST00000542832	RIC3	Q7Z5B4	369 aa		11.12	□□□□□ -0.63
DDX47-208	ENST00000542832	TMEM57	Q8N5G2	664 aa		11.12	□□□□□ -0.63
DDX47-208	ENST00000542832	NBPF15	Q8N660	670 aa		11.12	□□□□□ -0.63
DDX47-208	ENST00000542832	PANK1	Q8TE04	598 aa		11.12	□□□□□ -0.63
DDX47-208	ENST00000542832	METTL22	Q9BUU2	404 aa	Predicted RBP	11.12	□□□□□ -0.63
DDX47-208	ENST00000542832	CCDC87	Q9NVE4	849 aa		11.12	□□□□□ -0.63
DDX47-208	ENST00000542832	COG6	Q9Y2V7	657 aa		11.12	□□□□□ -0.63
DDX47-208	ENST00000542832	STK24	Q9Y6E0	443 aa		11.12	□□□□□ -0.63
DDX47-208	ENST00000542832	CIC	Q96RK0	1608 aa	Predicted RBP	11.12	□□□□□ -0.63
DDX47-208	ENST00000542832	PXDNL	A1KZ92	1463 aa		11.12	□□□□□ -0.63
DDX47-208	ENST00000542832	RGS12	O14924	1447 aa		11.11	□□□□□ -0.63
DDX47-208	ENST00000542832	TCERG1	O14776	1098 aa	Known RBP	11.11	□□□□□ -0.63
DDX47-208	ENST00000542832	RPS6KA4	O75676	772 aa		11.11	□□□□□ -0.63
DDX47-208	ENST00000542832	ECM2	O94769	699 aa	Predicted RBP	11.11	□□□□□ -0.63
DDX47-208	ENST00000542832	BEND3	Q5T5X7	828 aa		11.11	□□□□□ -0.63
DDX47-208	ENST00000542832	INTS5	Q6P9B9	1019 aa	Known RBP	11.11	□□□□□ -0.63
DDX47-208	ENST00000542832	ITPRIP	Q8IWB1	547 aa		11.11	□□□□□ -0.63
DDX47-208	ENST00000542832	RPAP2	Q8IXW5	612 aa	Predicted RBP	11.11	□□□□□ -0.63
DDX47-208	ENST00000542832	EXOC6	Q8TAG9	804 aa		11.11	□□□□□ -0.63
DDX47-208	ENST00000542832	XAGE3	Q8WTP9	111 aa		11.11	□□□□□ -0.63
DDX47-208	ENST00000542832	CRBN	Q96SW2	442 aa		11.11	□□□□□ -0.63
DDX47-208	ENST00000542832	ZSWIM6	Q9HCJ5	1215 aa		11.11	□□□□□ -0.63
DDX47-208	ENST00000542832	CRKL	P46109	303 aa	Known RBP	11.1	□□□□□ -0.63
DDX47-208	ENST00000542832	CCDC191	Q8NCU4	936 aa		11.1	□□□□□ -0.63
DDX47-208	ENST00000542832	NECTIN2	Q92692	538 aa		11.1	□□□□□ -0.63
DDX47-208	ENST00000542832	CCNL1	Q9UK58	526 aa	Predicted RBP	11.1	□□□□□ -0.63
DDX47-208	ENST00000542832	NHS	Q6T4R5	1651 aa		11.1	□□□□□ -0.63
DDX47-208	ENST00000542832	UTY	O14607	1347 aa		11.09	□□□□□ -0.63
DDX47-208	ENST00000542832	TRIM37	O94972	964 aa		11.09	□□□□□ -0.63
DDX47-208	ENST00000542832	HSP90B1	P14625	803 aa	Known RBP	11.09	□□□□□ -0.63
DDX47-208	ENST00000542832	MYL6B	P14649	208 aa		11.09	□□□□□ -0.63
DDX47-208	ENST00000542832	HDAC1	Q13547	482 aa	Predicted RBP	11.09	□□□□□ -0.63
DDX47-208	ENST00000542832	PROSER3	Q2NL68	480 aa		11.09	□□□□□ -0.63
DDX47-208	ENST00000542832	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.09	□□□□□ -0.63
DDX47-208	ENST00000542832	KIF6	Q6ZMV9	814 aa		11.09	□□□□□ -0.63
DDX47-208	ENST00000542832	FLAD1	Q8NFF5	587 aa		11.09	□□□□□ -0.63
DDX47-208	ENST00000542832	RWDD1	Q9H446	243 aa	Predicted RBP	11.09	□□□□□ -0.63
DDX47-208	ENST00000542832	MAP3K2	Q9Y2U5	619 aa		11.09	□□□□□ -0.63
DDX47-208	ENST00000542832	DOT1L	Q8TEK3	1739 aa		11.09	□□□□□ -0.63
DDX47-208	ENST00000542832	MAP3K15	Q6ZN16	1313 aa		11.09	□□□□□ -0.63
DDX47-208	ENST00000542832	COL15A1	P39059	1388 aa		11.08	□□□□□ -0.64
DDX47-208	ENST00000542832	TCIRG1	Q13488	830 aa		11.08	□□□□□ -0.64
DDX47-208	ENST00000542832	ITPK1	Q13572	414 aa		11.08	□□□□□ -0.64
DDX47-208	ENST00000542832	SLC4A10	Q6U841	1118 aa		11.08	□□□□□ -0.64
DDX47-208	ENST00000542832	CCDC136	Q96JN2	1154 aa		11.08	□□□□□ -0.64
DDX47-208	ENST00000542832	MFRP	Q9BY79	579 aa		11.08	□□□□□ -0.64
DDX47-208	ENST00000542832	USP44	Q9H0E7	712 aa		11.08	□□□□□ -0.64
DDX47-208	ENST00000542832	ZNF652	Q9Y2D9	606 aa		11.08	□□□□□ -0.64
DDX47-208	ENST00000542832	RTCB	Q9Y3I0	505 aa	Known RBP	11.08	□□□□□ -0.64
DDX47-208	ENST00000542832	ADCY9	O60503	1353 aa		11.07	□□□□□ -0.64
DDX47-208	ENST00000542832	STK25	O00506	426 aa		11.07	□□□□□ -0.64
DDX47-208	ENST00000542832	APBA3	O96018	575 aa		11.07	□□□□□ -0.64
DDX47-208	ENST00000542832	GNAI2	P04899	355 aa		11.07	□□□□□ -0.64
DDX47-208	ENST00000542832	AIMP1	Q12904	312 aa	Known RBP	11.07	□□□□□ -0.64
DDX47-208	ENST00000542832	FAM182B	Q5T319	152 aa		11.07	□□□□□ -0.64
DDX47-208	ENST00000542832	ZBTB1	Q9Y2K1	713 aa		11.07	□□□□□ -0.64
DDX47-208	ENST00000542832	SBF2	Q86WG5	1849 aa		11.07	□□□□□ -0.64
DDX47-208	ENST00000542832	LAMB4	A4D0S4	1761 aa		11.06	□□□□□ -0.64
DDX47-208	ENST00000542832		F6X3S4	739 aa		11.06	□□□□□ -0.64
DDX47-208	ENST00000542832	HMMR	O75330	724 aa		11.06	□□□□□ -0.64
DDX47-208	ENST00000542832	SSFA2	P28290	1259 aa		11.06	□□□□□ -0.64
DDX47-208	ENST00000542832	SF3B2	Q13435	895 aa	Known RBP	11.06	□□□□□ -0.64
DDX47-208	ENST00000542832	GCKR	Q14397	625 aa		11.06	□□□□□ -0.64
DDX47-208	ENST00000542832	TXNRD1	Q16881	649 aa		11.06	□□□□□ -0.64
DDX47-208	ENST00000542832	PARP10	Q53GL7	1025 aa		11.06	□□□□□ -0.64
DDX47-208	ENST00000542832	TRAPPC3L	Q5T215	181 aa		11.06	□□□□□ -0.64
DDX47-208	ENST00000542832	GPR153	Q6NV75	609 aa		11.06	□□□□□ -0.64
DDX47-208	ENST00000542832	CENPQ	Q7L2Z9	268 aa	Predicted RBP	11.06	□□□□□ -0.64
DDX47-208	ENST00000542832	DZIP3	Q86Y13	1208 aa	Known RBP	11.06	□□□□□ -0.64
DDX47-208	ENST00000542832	AK7	Q96M32	723 aa		11.06	□□□□□ -0.64
DDX47-208	ENST00000542832	ISCA1	Q9BUE6	129 aa		11.06	□□□□□ -0.64
DDX47-208	ENST00000542832	C9orf78	Q9NZ63	289 aa	Predicted RBP	11.06	□□□□□ -0.64
DDX47-208	ENST00000542832	NEURL1B	A8MQ27	555 aa		11.05	□□□□□ -0.64
DDX47-208	ENST00000542832	GRM8	O00222	908 aa		11.05	□□□□□ -0.64
DDX47-208	ENST00000542832	ANXA1	P04083	346 aa		11.05	□□□□□ -0.64
DDX47-208	ENST00000542832	UBTFL1	P0CB47	393 aa	Predicted RBP	11.05	□□□□□ -0.64
DDX47-208	ENST00000542832	IRX6	P78412	446 aa	Predicted RBP	11.05	□□□□□ -0.64
DDX47-208	ENST00000542832	MTX1	Q13505	466 aa		11.05	□□□□□ -0.64
DDX47-208	ENST00000542832	VARS2	Q5ST30	1063 aa	Known RBP	11.05	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms