RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 AIMP1Q12904 312 aaKnown RBP7.89□□□□□ -1.15
PTPRO-208ENST00000542557 WDR33Q9C0J8 1336 aaKnown RBP7.89□□□□□ -1.15
PTPRO-208ENST00000542557 RFX7Q2KHR2 1363 aa7.89□□□□□ -1.15
PTPRO-208ENST00000542557 JCADQ9P266 1359 aa7.89□□□□□ -1.15
PTPRO-208ENST00000542557 PRPF40AO75400 957 aaKnown RBP7.89□□□□□ -1.15
PTPRO-208ENST00000542557 CCDC173Q0VFZ6 552 aa7.89□□□□□ -1.15
PTPRO-208ENST00000542557 CAVIN1Q6NZI2 390 aaKnown RBP7.89□□□□□ -1.15
PTPRO-208ENST00000542557 COPS6Q7L5N1 327 aa7.89□□□□□ -1.15
PTPRO-208ENST00000542557 RASEFQ8IZ41 740 aa7.89□□□□□ -1.15
PTPRO-208ENST00000542557 GPT2Q8TD30 523 aa7.89□□□□□ -1.15
PTPRO-208ENST00000542557 RRAGDQ9NQL2 400 aaPredicted RBP7.89□□□□□ -1.15
PTPRO-208ENST00000542557 RPAP1Q9BWH6 1393 aaPredicted RBP7.89□□□□□ -1.15
PTPRO-208ENST00000542557 CCDC171Q6TFL3 1326 aa7.89□□□□□ -1.15
PTPRO-208ENST00000542557 RABL6Q3YEC7 729 aaPredicted RBP7.89□□□□□ -1.15
PTPRO-208ENST00000542557 ANKRD13DQ6ZTN6 518 aa7.89□□□□□ -1.15
PTPRO-208ENST00000542557 EAF2Q96CJ1 260 aaPredicted RBP7.89□□□□□ -1.15
PTPRO-208ENST00000542557 PPP1R9BQ96SB3 815 aa7.89□□□□□ -1.15
PTPRO-208ENST00000542557 COPRSQ9NQ92 184 aa7.89□□□□□ -1.15
PTPRO-208ENST00000542557 LIMCH1Q9UPQ0 1083 aa7.89□□□□□ -1.15
PTPRO-208ENST00000542557 NUP188Q5SRE5 1749 aa7.88□□□□□ -1.15
PTPRO-208ENST00000542557 NASPP49321 788 aaPredicted RBP7.88□□□□□ -1.15
PTPRO-208ENST00000542557 AK2P54819 239 aa7.88□□□□□ -1.15
PTPRO-208ENST00000542557 VPS53Q5VIR6 699 aa7.88□□□□□ -1.15
PTPRO-208ENST00000542557 MYD88Q99836 296 aa7.88□□□□□ -1.15
PTPRO-208ENST00000542557 ABCA3Q99758 1704 aa7.88□□□□□ -1.15
PTPRO-208ENST00000542557 MED23Q9ULK4 1368 aa7.88□□□□□ -1.15
PTPRO-208ENST00000542557 MYL6BP14649 208 aa7.88□□□□□ -1.15
PTPRO-208ENST00000542557 CLCN1P35523 988 aa7.88□□□□□ -1.15
PTPRO-208ENST00000542557 NECTIN1Q15223 517 aa7.88□□□□□ -1.15
PTPRO-208ENST00000542557 TMEM87AQ8NBN3 555 aa7.88□□□□□ -1.15
PTPRO-208ENST00000542557 DDX17Q92841 729 aaKnown RBP7.88□□□□□ -1.15
PTPRO-208ENST00000542557 ZSWIM6Q9HCJ5 1215 aa7.88□□□□□ -1.15
PTPRO-208ENST00000542557 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.88□□□□□ -1.15
PTPRO-208ENST00000542557 RFX5P48382 616 aaPredicted RBP7.87□□□□□ -1.15
PTPRO-208ENST00000542557 NOL8Q76FK4 1167 aaKnown RBP7.87□□□□□ -1.15
PTPRO-208ENST00000542557 RUFY3Q7L099 469 aa7.87□□□□□ -1.15
PTPRO-208ENST00000542557 WDR17Q8IZU2 1322 aa7.87□□□□□ -1.15
PTPRO-208ENST00000542557 PCDH11XQ9BZA7 1347 aa7.87□□□□□ -1.15
PTPRO-208ENST00000542557 PCDH11YQ9BZA8 1340 aa7.87□□□□□ -1.15
PTPRO-208ENST00000542557 KCPQ6ZWJ8 1503 aa7.87□□□□□ -1.15
PTPRO-208ENST00000542557 CABP4P57796 275 aa7.87□□□□□ -1.15
PTPRO-208ENST00000542557 PTH1RQ03431 593 aa7.87□□□□□ -1.15
PTPRO-208ENST00000542557 CHRNA2Q15822 529 aa7.87□□□□□ -1.15
PTPRO-208ENST00000542557 EPHA10Q5JZY3 1008 aa7.87□□□□□ -1.15
PTPRO-208ENST00000542557 PLBD2Q8NHP8 589 aa7.87□□□□□ -1.15
PTPRO-208ENST00000542557 CABLES1Q8TDN4 633 aa7.87□□□□□ -1.15
PTPRO-208ENST00000542557 MAP4K1Q92918 833 aa7.87□□□□□ -1.15
PTPRO-208ENST00000542557 ZSCAN31Q96LW9 406 aaPredicted RBP7.87□□□□□ -1.15
PTPRO-208ENST00000542557 SH2B1Q9NRF2 756 aaPredicted RBP7.87□□□□□ -1.15
PTPRO-208ENST00000542557 USP16Q9Y5T5 823 aa7.87□□□□□ -1.15
PTPRO-208ENST00000542557 TJP1Q07157 1748 aa7.87□□□□□ -1.15
PTPRO-208ENST00000542557 SHANK3Q9BYB0 1731 aa7.87□□□□□ -1.15
PTPRO-208ENST00000542557 COL5A2P05997 1499 aaPredicted RBP7.86□□□□□ -1.15
PTPRO-208ENST00000542557 NCLP19338 710 aaKnown RBP7.86□□□□□ -1.15
PTPRO-208ENST00000542557 CASTP20810 708 aaKnown RBP7.86□□□□□ -1.15
PTPRO-208ENST00000542557 LRSAM1Q6UWE0 723 aa7.86□□□□□ -1.15
PTPRO-208ENST00000542557 ANP32BQ92688 251 aaKnown RBP7.86□□□□□ -1.15
PTPRO-208ENST00000542557 CCDC8Q9H0W5 538 aaPredicted RBP7.86□□□□□ -1.15
PTPRO-208ENST00000542557 TLR7Q9NYK1 1049 aaKnown RBP7.86□□□□□ -1.15
PTPRO-208ENST00000542557 CYP46A1Q9Y6A2 500 aa7.86□□□□□ -1.15
PTPRO-208ENST00000542557 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.86□□□□□ -1.15
PTPRO-208ENST00000542557 ZKSCAN1P17029 563 aaPredicted RBP7.86□□□□□ -1.15
PTPRO-208ENST00000542557 CASP7P55210 303 aa7.86□□□□□ -1.15
PTPRO-208ENST00000542557 PTPN12Q05209 780 aaKnown RBP7.86□□□□□ -1.15
PTPRO-208ENST00000542557 NMIQ13287 307 aaPredicted RBP7.86□□□□□ -1.15
PTPRO-208ENST00000542557 PRPF40BQ6NWY9 871 aaKnown RBP7.86□□□□□ -1.15
PTPRO-208ENST00000542557 TRIM44Q96DX7 344 aaPredicted RBP7.86□□□□□ -1.15
PTPRO-208ENST00000542557 TMEM63CQ9P1W3 806 aa7.86□□□□□ -1.15
PTPRO-208ENST00000542557 RBM8AQ9Y5S9 174 aaKnown RBP7.86□□□□□ -1.15
PTPRO-208ENST00000542557 TNS2Q63HR2 1409 aa7.86□□□□□ -1.15
PTPRO-208ENST00000542557 ERVV-2B6SEH9 535 aa7.85□□□□□ -1.15
PTPRO-208ENST00000542557 ATP5JP18859 108 aa7.85□□□□□ -1.15
PTPRO-208ENST00000542557 CREB3L3Q68CJ9 461 aa7.85□□□□□ -1.15
PTPRO-208ENST00000542557 SYAP1Q96A49 352 aaPredicted RBP7.85□□□□□ -1.15
PTPRO-208ENST00000542557 JAKMIP1Q96N16 626 aaKnown RBP7.85□□□□□ -1.15
PTPRO-208ENST00000542557 FSD1Q9BTV5 496 aa7.85□□□□□ -1.15
PTPRO-208ENST00000542557 SIL1Q9H173 461 aa7.85□□□□□ -1.15
PTPRO-208ENST00000542557 PDRG1Q9NUG6 133 aa7.85□□□□□ -1.15
PTPRO-208ENST00000542557 ESPNB1AK53 854 aa7.85□□□□□ -1.15
PTPRO-208ENST00000542557 ZSCAN22P10073 491 aaPredicted RBP7.85□□□□□ -1.15
PTPRO-208ENST00000542557 PSMA5P28066 241 aa7.85□□□□□ -1.15
PTPRO-208ENST00000542557 NKX1-1Q15270 411 aaPredicted RBP7.85□□□□□ -1.15
PTPRO-208ENST00000542557 RNF20Q5VTR2 975 aa7.85□□□□□ -1.15
PTPRO-208ENST00000542557 BRINP3Q76B58 766 aa7.85□□□□□ -1.15
PTPRO-208ENST00000542557 TICAM2Q86XR7 235 aa7.85□□□□□ -1.15
PTPRO-208ENST00000542557 FAM227BQ96M60 508 aa7.85□□□□□ -1.15
PTPRO-208ENST00000542557 ALDH8A1Q9H2A2 487 aaPredicted RBP7.85□□□□□ -1.15
PTPRO-208ENST00000542557 HMG20BQ9P0W2 317 aa7.85□□□□□ -1.15
PTPRO-208ENST00000542557 SOS2Q07890 1332 aaPredicted RBP7.85□□□□□ -1.15
PTPRO-208ENST00000542557 A0A0D9SFI3 127 aa7.85□□□□□ -1.15
PTPRO-208ENST00000542557 STX6O43752 255 aa7.85□□□□□ -1.15
PTPRO-208ENST00000542557 TSGA10IPQ3SY00 556 aa7.85□□□□□ -1.15
PTPRO-208ENST00000542557 TNNI3KQ59H18 835 aa7.85□□□□□ -1.15
PTPRO-208ENST00000542557 FOXD4L5Q5VV16 416 aaPredicted RBP7.85□□□□□ -1.15
PTPRO-208ENST00000542557 FOXD4L4Q8WXT5 416 aaPredicted RBP7.85□□□□□ -1.15
PTPRO-208ENST00000542557 RBM27Q9P2N5 1060 aaKnown RBP7.85□□□□□ -1.15
PTPRO-208ENST00000542557 SMC3Q9UQE7 1217 aa7.85□□□□□ -1.15
PTPRO-208ENST00000542557 ATP6V1DQ9Y5K8 247 aa7.85□□□□□ -1.15
PTPRO-208ENST00000542557 FPGT-TNNI3KV9GXZ4 949 aa7.85□□□□□ -1.15
PTPRO-208ENST00000542557 SLC27A2O14975 620 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms