RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 PSMD1Q99460 953 aa13.38□□□□□ -0.27
CHFR-220ENST00000541817 SAGE1Q9NXZ1 904 aa13.38□□□□□ -0.27
CHFR-220ENST00000541817 MRC1P22897 1456 aa13.37□□□□□ -0.27
CHFR-220ENST00000541817 KLRG2A4D1S0 409 aaPredicted RBP13.37□□□□□ -0.27
CHFR-220ENST00000541817 IL6STP40189 918 aaPredicted RBP13.37□□□□□ -0.27
CHFR-220ENST00000541817 GMPSP49915 693 aaPredicted RBP13.37□□□□□ -0.27
CHFR-220ENST00000541817 NIM1KQ8IY84 436 aa13.37□□□□□ -0.27
CHFR-220ENST00000541817 TTC5Q8N0Z6 440 aa13.37□□□□□ -0.27
CHFR-220ENST00000541817 TRPM4Q8TD43 1214 aa13.37□□□□□ -0.27
CHFR-220ENST00000541817 CSRNP1Q96S65 589 aa13.37□□□□□ -0.27
CHFR-220ENST00000541817 ALDH1B1P30837 517 aa13.36□□□□□ -0.27
CHFR-220ENST00000541817 ZNF157P51786 506 aaPredicted RBP13.36□□□□□ -0.27
CHFR-220ENST00000541817 NPM2Q86SE8 214 aaKnown RBP13.36□□□□□ -0.27
CHFR-220ENST00000541817 CXCL9Q07325 125 aa13.35□□□□□ -0.27
CHFR-220ENST00000541817 AOC3Q16853 763 aa13.35□□□□□ -0.27
CHFR-220ENST00000541817 CDC37L1Q7L3B6 337 aa13.35□□□□□ -0.27
CHFR-220ENST00000541817 POLR3GLQ9BT43 218 aa13.35□□□□□ -0.27
CHFR-220ENST00000541817 PGAP2Q9UHJ9 254 aa13.35□□□□□ -0.27
CHFR-220ENST00000541817 NIP7Q9Y221 180 aaKnown RBP eCLIP13.35□□□□□ -0.27
CHFR-220ENST00000541817 HEG1Q9ULI3 1381 aa13.34□□□□□ -0.27
CHFR-220ENST00000541817 PPIP5K2O43314 1243 aa13.34□□□□□ -0.27
CHFR-220ENST00000541817 HMOX1P09601 288 aa13.34□□□□□ -0.27
CHFR-220ENST00000541817 MTHFSDQ2M296 383 aaKnown RBP13.34□□□□□ -0.27
CHFR-220ENST00000541817 TPTE2Q6XPS3 522 aa13.34□□□□□ -0.27
CHFR-220ENST00000541817 CCER1Q8TC90 406 aaPredicted RBP13.34□□□□□ -0.27
CHFR-220ENST00000541817 HDAC9Q9UKV0 1011 aa13.34□□□□□ -0.27
CHFR-220ENST00000541817 POLR2AP24928 1970 aaKnown RBP13.34□□□□□ -0.27
CHFR-220ENST00000541817 NPC1L1Q9UHC9 1359 aa13.33□□□□□ -0.27
CHFR-220ENST00000541817 BCL2L13Q9BXK5 485 aa13.33□□□□□ -0.28
CHFR-220ENST00000541817 PRAMEF22A3QJZ6 481 aa13.32□□□□□ -0.28
CHFR-220ENST00000541817 POTEFA5A3E0 1075 aa13.32□□□□□ -0.28
CHFR-220ENST00000541817 KCNQ3O43525 872 aa13.32□□□□□ -0.28
CHFR-220ENST00000541817 RAD17O75943 681 aa13.32□□□□□ -0.28
CHFR-220ENST00000541817 TBC1D8O95759 1140 aa13.32□□□□□ -0.28
CHFR-220ENST00000541817 GTF2E1P29083 439 aaPredicted RBP13.32□□□□□ -0.28
CHFR-220ENST00000541817 IL13P35225 146 aa13.32□□□□□ -0.28
CHFR-220ENST00000541817 CDCA8Q53HL2 280 aa13.32□□□□□ -0.28
CHFR-220ENST00000541817 NUTM1Q86Y26 1132 aa13.32□□□□□ -0.28
CHFR-220ENST00000541817 ZNF296Q8WUU4 475 aaPredicted RBP13.32□□□□□ -0.28
CHFR-220ENST00000541817 CCDC102AQ96A19 550 aa13.32□□□□□ -0.28
CHFR-220ENST00000541817 GBA2Q9HCG7 927 aaPredicted RBP13.32□□□□□ -0.28
CHFR-220ENST00000541817 COLQQ9Y215 455 aaPredicted RBP13.32□□□□□ -0.28
CHFR-220ENST00000541817 MKI67P46013 3256 aaKnown RBP13.31□□□□□ -0.28
CHFR-220ENST00000541817 ADM5C9JUS6 153 aa13.31□□□□□ -0.28
CHFR-220ENST00000541817 C2orf69Q8N8R5 385 aa13.31□□□□□ -0.28
CHFR-220ENST00000541817 USP16Q9Y5T5 823 aa13.31□□□□□ -0.28
CHFR-220ENST00000541817 SLC10A3P09131 477 aa13.3□□□□□ -0.28
CHFR-220ENST00000541817 HLFQ16534 295 aa13.3□□□□□ -0.28
CHFR-220ENST00000541817 ZNF790Q6PG37 636 aa13.3□□□□□ -0.28
CHFR-220ENST00000541817 SAMD7Q7Z3H4 446 aa13.3□□□□□ -0.28
CHFR-220ENST00000541817 SLC17A8Q8NDX2 589 aa13.3□□□□□ -0.28
CHFR-220ENST00000541817 TEX13AQ9BXU3 409 aaPredicted RBP13.3□□□□□ -0.28
CHFR-220ENST00000541817 CNOT7Q9UIV1 285 aaKnown RBP13.3□□□□□ -0.28
CHFR-220ENST00000541817 ABCC12Q96J65 1359 aa13.3□□□□□ -0.28
CHFR-220ENST00000541817 PKN2Q16513 984 aaKnown RBP13.29□□□□□ -0.28
CHFR-220ENST00000541817 ZC3H15Q8WU90 426 aaKnown RBP13.29□□□□□ -0.28
CHFR-220ENST00000541817 RPGRQ92834 1020 aaKnown RBP13.29□□□□□ -0.28
CHFR-220ENST00000541817 ZNRF3Q9ULT6 936 aa13.29□□□□□ -0.28
CHFR-220ENST00000541817 PPEF1O14829 653 aaPredicted RBP13.28□□□□□ -0.28
CHFR-220ENST00000541817 EGFRP00533 1210 aa13.28□□□□□ -0.28
CHFR-220ENST00000541817 TBC1D10BQ4KMP7 808 aaPredicted RBP13.28□□□□□ -0.28
CHFR-220ENST00000541817 RBM26Q5T8P6 1007 aaKnown RBP13.28□□□□□ -0.28
CHFR-220ENST00000541817 CC2D2BQ6DHV5 1058 aa13.28□□□□□ -0.28
CHFR-220ENST00000541817 FBXO46Q6PJ61 603 aaPredicted RBP13.28□□□□□ -0.28
CHFR-220ENST00000541817 CLEC4GQ6UXB4 293 aa13.28□□□□□ -0.28
CHFR-220ENST00000541817 KRT26Q7Z3Y9 468 aa13.28□□□□□ -0.28
CHFR-220ENST00000541817 ZNF652Q9Y2D9 606 aa13.28□□□□□ -0.28
CHFR-220ENST00000541817 ZBTB12Q9Y330 459 aaPredicted RBP13.28□□□□□ -0.28
CHFR-220ENST00000541817 TEFQ10587 303 aa13.27□□□□□ -0.29
CHFR-220ENST00000541817 CRY2Q49AN0 593 aa13.27□□□□□ -0.29
CHFR-220ENST00000541817 MICALL2Q8IY33 904 aa13.27□□□□□ -0.29
CHFR-220ENST00000541817 IL17REQ8NFR9 667 aa13.27□□□□□ -0.29
CHFR-220ENST00000541817 FMNL2Q96PY5 1086 aa13.27□□□□□ -0.29
CHFR-220ENST00000541817 H7C1D1 291 aa13.26□□□□□ -0.29
CHFR-220ENST00000541817 C3orf67Q6ZVT6 689 aa13.26□□□□□ -0.29
CHFR-220ENST00000541817 RASAL3Q86YV0 1011 aa13.26□□□□□ -0.29
CHFR-220ENST00000541817 PAPPA2Q9BXP8 1791 aa13.25□□□□□ -0.29
CHFR-220ENST00000541817 MORC1Q86VD1 984 aa13.25□□□□□ -0.29
CHFR-220ENST00000541817 R3HDMLQ9H3Y0 253 aa13.25□□□□□ -0.29
CHFR-220ENST00000541817 YDJCA8MPS7 323 aa13.24□□□□□ -0.29
CHFR-220ENST00000541817 NBPF26B4DH59 902 aa13.24□□□□□ -0.29
CHFR-220ENST00000541817 GPR25O00155 361 aa13.24□□□□□ -0.29
CHFR-220ENST00000541817 EN2P19622 333 aaPredicted RBP13.24□□□□□ -0.29
CHFR-220ENST00000541817 NBPF10Q6P3W6 841 aaKnown RBP13.24□□□□□ -0.29
CHFR-220ENST00000541817 NGEFQ8N5V2 710 aa13.24□□□□□ -0.29
CHFR-220ENST00000541817 RBM17Q96I25 401 aaKnown RBP13.24□□□□□ -0.29
CHFR-220ENST00000541817 SIPA1L3O60292 1781 aaPredicted RBP13.23□□□□□ -0.29
CHFR-220ENST00000541817 ASTN2O75129 1339 aaPredicted RBP13.23□□□□□ -0.29
CHFR-220ENST00000541817 HOXA10P31260 410 aaPredicted RBP13.23□□□□□ -0.29
CHFR-220ENST00000541817 MKRN3Q13064 507 aaKnown RBP13.23□□□□□ -0.29
CHFR-220ENST00000541817 TNIP1Q15025 636 aa13.23□□□□□ -0.29
CHFR-220ENST00000541817 MOB2Q70IA6 237 aa13.23□□□□□ -0.29
CHFR-220ENST00000541817 DCPSQ96C86 337 aaKnown RBP13.23□□□□□ -0.29
CHFR-220ENST00000541817 GPTP24298 496 aa13.22□□□□□ -0.29
CHFR-220ENST00000541817 SZT2Q5T011 3432 aa13.21□□□□□ -0.29
CHFR-220ENST00000541817 GRIPAP1Q4V328 841 aa13.21□□□□□ -0.29
CHFR-220ENST00000541817 CDCA5Q96FF9 252 aa13.21□□□□□ -0.29
CHFR-220ENST00000541817 CRAMP1Q96RY5 1269 aa13.21□□□□□ -0.29
CHFR-220ENST00000541817 PANK3Q9H999 370 aa13.21□□□□□ -0.29
CHFR-220ENST00000541817 SCAF8Q9UPN6 1271 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms