RNA–Protein interactions for RNA: ENST00000541681.1

VEGFB-203, Transcript of vascular endothelial growth factor B, humanhuman

TSL 3

Gene VEGFB, Length 225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-203ENST00000541681 HMMRO75330 724 aa8.16□□□□□ -1.1
VEGFB-203ENST00000541681 STARD3NLO95772 234 aa8.16□□□□□ -1.1
VEGFB-203ENST00000541681 CACNA1SQ13698 1873 aa8.16□□□□□ -1.1
VEGFB-203ENST00000541681 C9orf131Q5VYM1 1079 aa8.16□□□□□ -1.1
VEGFB-203ENST00000541681 NPM2Q86SE8 214 aaKnown RBP8.16□□□□□ -1.1
VEGFB-203ENST00000541681 CARMIL3Q8ND23 1372 aa8.16□□□□□ -1.1
VEGFB-203ENST00000541681 DDRGK1Q96HY6 314 aa8.16□□□□□ -1.1
VEGFB-203ENST00000541681 ZNF496Q96IT1 587 aaPredicted RBP8.16□□□□□ -1.1
VEGFB-203ENST00000541681 RNF181Q9P0P0 153 aa8.16□□□□□ -1.1
VEGFB-203ENST00000541681 DBF4Q9UBU7 674 aaPredicted RBP8.16□□□□□ -1.1
VEGFB-203ENST00000541681 NARFQ9UHQ1 456 aa8.16□□□□□ -1.1
VEGFB-203ENST00000541681 DLEC1Q9Y238 1755 aa8.16□□□□□ -1.1
VEGFB-203ENST00000541681 COL11A2P13942 1736 aaPredicted RBP8.15□□□□□ -1.1
VEGFB-203ENST00000541681 TIAM2Q8IVF5 1701 aa8.15□□□□□ -1.1
VEGFB-203ENST00000541681 KCNQ3O43525 872 aa8.15□□□□□ -1.1
VEGFB-203ENST00000541681 GNAI2P04899 355 aa8.15□□□□□ -1.1
VEGFB-203ENST00000541681 RASSF7Q02833 373 aa8.15□□□□□ -1.1
VEGFB-203ENST00000541681 ANKRD45Q5TZF3 282 aa8.15□□□□□ -1.1
VEGFB-203ENST00000541681 CEP85Q6P2H3 762 aa8.15□□□□□ -1.1
VEGFB-203ENST00000541681 SLC4A10Q6U841 1118 aa8.15□□□□□ -1.1
VEGFB-203ENST00000541681 C2CD5Q86YS7 1000 aa8.15□□□□□ -1.1
VEGFB-203ENST00000541681 C16orf71Q8IYS4 520 aaPredicted RBP8.15□□□□□ -1.1
VEGFB-203ENST00000541681 VSIG10Q8N0Z9 540 aa8.15□□□□□ -1.1
VEGFB-203ENST00000541681 CCDC24Q8N4L8 307 aa8.15□□□□□ -1.1
VEGFB-203ENST00000541681 FMNL2Q96PY5 1086 aa8.15□□□□□ -1.1
VEGFB-203ENST00000541681 C1orf115Q9H7X2 142 aa8.15□□□□□ -1.1
VEGFB-203ENST00000541681 NMRK2Q9NPI5 230 aa8.15□□□□□ -1.1
VEGFB-203ENST00000541681 ZNF219Q9P2Y4 722 aaPredicted RBP8.15□□□□□ -1.1
VEGFB-203ENST00000541681 BCORQ6W2J9 1755 aa8.15□□□□□ -1.11
VEGFB-203ENST00000541681 NRXN2Q9P2S2 1712 aa8.15□□□□□ -1.11
VEGFB-203ENST00000541681 A0A087WZG4 1122 aa8.14□□□□□ -1.11
VEGFB-203ENST00000541681 F6X3S4 739 aa8.14□□□□□ -1.11
VEGFB-203ENST00000541681 KIF3CO14782 793 aa8.14□□□□□ -1.11
VEGFB-203ENST00000541681 SERPINB2P05120 415 aa8.14□□□□□ -1.11
VEGFB-203ENST00000541681 HSPA6P17066 643 aa8.14□□□□□ -1.11
VEGFB-203ENST00000541681 EIF2S2P20042 333 aaKnown RBP8.14□□□□□ -1.11
VEGFB-203ENST00000541681 KCNA3P22001 575 aa8.14□□□□□ -1.11
VEGFB-203ENST00000541681 PIP4K2AP48426 406 aaPredicted RBP8.14□□□□□ -1.11
VEGFB-203ENST00000541681 ZNF790Q6PG37 636 aa8.14□□□□□ -1.11
VEGFB-203ENST00000541681 NECTIN2Q92692 538 aa8.14□□□□□ -1.11
VEGFB-203ENST00000541681 MEIS3Q99687 375 aa8.14□□□□□ -1.11
VEGFB-203ENST00000541681 PHAXQ9H814 394 aaKnown RBP8.14□□□□□ -1.11
VEGFB-203ENST00000541681 HYPKQ9NX55 129 aa8.14□□□□□ -1.11
VEGFB-203ENST00000541681 ZBTB47Q9UFB7 747 aaPredicted RBP8.14□□□□□ -1.11
VEGFB-203ENST00000541681 TBC1D2BQ9UPU7 963 aa8.14□□□□□ -1.11
VEGFB-203ENST00000541681 ANKRD31Q8N7Z5 1873 aa8.14□□□□□ -1.11
VEGFB-203ENST00000541681 IBTKQ9P2D0 1353 aaPredicted RBP8.13□□□□□ -1.11
VEGFB-203ENST00000541681 EIF5BO60841 1220 aaKnown RBP8.13□□□□□ -1.11
VEGFB-203ENST00000541681 A1BGP04217 495 aa8.13□□□□□ -1.11
VEGFB-203ENST00000541681 TM4SF1P30408 202 aa8.13□□□□□ -1.11
VEGFB-203ENST00000541681 ATP8B2P98198 1209 aa8.13□□□□□ -1.11
VEGFB-203ENST00000541681 TBC1D9BQ66K14 1250 aa8.13□□□□□ -1.11
VEGFB-203ENST00000541681 DNAAF4Q8WXU2 420 aa8.13□□□□□ -1.11
VEGFB-203ENST00000541681 LNPKQ9C0E8 428 aa8.13□□□□□ -1.11
VEGFB-203ENST00000541681 SRCIN1Q9C0H9 1055 aa8.13□□□□□ -1.11
VEGFB-203ENST00000541681 BCL2L12Q9HB09 334 aa8.13□□□□□ -1.11
VEGFB-203ENST00000541681 DDX21Q9NR30 783 aaKnown RBP eCLIP8.13□□□□□ -1.11
VEGFB-203ENST00000541681 CHPF2Q9P2E5 772 aa8.13□□□□□ -1.11
VEGFB-203ENST00000541681 HDAC5Q9UQL6 1122 aa8.13□□□□□ -1.11
VEGFB-203ENST00000541681 NOP58Q9Y2X3 529 aaKnown RBP8.13□□□□□ -1.11
VEGFB-203ENST00000541681 TNRC6CQ9HCJ0 1690 aaKnown RBP8.13□□□□□ -1.11
VEGFB-203ENST00000541681 MYH3P11055 1940 aa8.13□□□□□ -1.11
VEGFB-203ENST00000541681 NUP98P52948 1817 aa8.13□□□□□ -1.11
VEGFB-203ENST00000541681 H0YIN7 160 aa8.12□□□□□ -1.11
VEGFB-203ENST00000541681 EIF5P55010 431 aaKnown RBP8.12□□□□□ -1.11
VEGFB-203ENST00000541681 BMP2KLQ5H9B9 411 aa8.12□□□□□ -1.11
VEGFB-203ENST00000541681 KSR2Q6VAB6 950 aa8.12□□□□□ -1.11
VEGFB-203ENST00000541681 ERICH6Q7L0X2 663 aa8.12□□□□□ -1.11
VEGFB-203ENST00000541681 ZNF622Q969S3 477 aaKnown RBP eCLIP8.12□□□□□ -1.11
VEGFB-203ENST00000541681 USP44Q9H0E7 712 aa8.12□□□□□ -1.11
VEGFB-203ENST00000541681 UPF2Q9HAU5 1272 aaKnown RBP8.12□□□□□ -1.11
VEGFB-203ENST00000541681 SBF1O95248 1867 aa8.12□□□□□ -1.11
VEGFB-203ENST00000541681 ANKRD36CQ5JPF3 1778 aa8.12□□□□□ -1.11
VEGFB-203ENST00000541681 CCDC88AQ3V6T2 1871 aa8.11□□□□□ -1.11
VEGFB-203ENST00000541681 PRAMEF22A3QJZ6 481 aa8.11□□□□□ -1.11
VEGFB-203ENST00000541681 PI4KAP2A4QPH2 592 aa8.11□□□□□ -1.11
VEGFB-203ENST00000541681 ALDH1L1O75891 902 aa8.11□□□□□ -1.11
VEGFB-203ENST00000541681 DDX58O95786 925 aaKnown RBP8.11□□□□□ -1.11
VEGFB-203ENST00000541681 SNRPA1P09661 255 aaKnown RBP8.11□□□□□ -1.11
VEGFB-203ENST00000541681 UBTFL1P0CB47 393 aaPredicted RBP8.11□□□□□ -1.11
VEGFB-203ENST00000541681 BEND3Q5T5X7 828 aa8.11□□□□□ -1.11
VEGFB-203ENST00000541681 DZIP3Q86Y13 1208 aaKnown RBP8.11□□□□□ -1.11
VEGFB-203ENST00000541681 TTLL6Q8N841 843 aa8.11□□□□□ -1.11
VEGFB-203ENST00000541681 PI4KAP1Q8N8J0 262 aa8.11□□□□□ -1.11
VEGFB-203ENST00000541681 CNBD1Q8NA66 436 aa8.11□□□□□ -1.11
VEGFB-203ENST00000541681 TEX13AQ9BXU3 409 aaPredicted RBP8.11□□□□□ -1.11
VEGFB-203ENST00000541681 WDR90Q96KV7 1748 aa8.11□□□□□ -1.11
VEGFB-203ENST00000541681 CEP350Q5VT06 3117 aa8.1□□□□□ -1.11
VEGFB-203ENST00000541681 FAM177BA6PVY3 158 aa8.1□□□□□ -1.11
VEGFB-203ENST00000541681 TOMM70O94826 608 aa8.1□□□□□ -1.11
VEGFB-203ENST00000541681 SEC24BO95487 1268 aa8.1□□□□□ -1.11
VEGFB-203ENST00000541681 IL6STP40189 918 aaPredicted RBP8.1□□□□□ -1.11
VEGFB-203ENST00000541681 ST5P78524 1137 aa8.1□□□□□ -1.11
VEGFB-203ENST00000541681 PDIA6Q15084 440 aa8.1□□□□□ -1.11
VEGFB-203ENST00000541681 PLEKHM2Q8IWE5 1019 aa8.1□□□□□ -1.11
VEGFB-203ENST00000541681 SETDB2Q96T68 719 aa8.1□□□□□ -1.11
VEGFB-203ENST00000541681 ERBB4Q15303 1308 aa8.09□□□□□ -1.11
VEGFB-203ENST00000541681 C21orf2O43822 256 aa8.09□□□□□ -1.11
VEGFB-203ENST00000541681 CAMTA2O94983 1202 aa8.09□□□□□ -1.11
VEGFB-203ENST00000541681 PDE6BP35913 854 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms