RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 H7C1W4 665 aa10.75□□□□□ -0.69
THBS3-210ENST00000541576 RXRBP28702 533 aa10.75□□□□□ -0.69
THBS3-210ENST00000541576 HLFQ16534 295 aa10.75□□□□□ -0.69
THBS3-210ENST00000541576 OTUD7AQ8TE49 926 aaPredicted RBP10.74□□□□□ -0.69
THBS3-210ENST00000541576 COL15A1P39059 1388 aa10.74□□□□□ -0.69
THBS3-210ENST00000541576 CNTNAP4Q9C0A0 1308 aa10.74□□□□□ -0.69
THBS3-210ENST00000541576 SURF6O75683 361 aaKnown RBP10.74□□□□□ -0.69
THBS3-210ENST00000541576 CASP7P55210 303 aa10.74□□□□□ -0.69
THBS3-210ENST00000541576 EPHA10Q5JZY3 1008 aa10.73□□□□□ -0.69
THBS3-210ENST00000541576 LRRCC1Q9C099 1032 aa10.73□□□□□ -0.69
THBS3-210ENST00000541576 LY75O60449 1722 aa10.73□□□□□ -0.69
THBS3-210ENST00000541576 GPTP24298 496 aa10.73□□□□□ -0.69
THBS3-210ENST00000541576 HSP90AB4PQ58FF6 505 aa10.73□□□□□ -0.69
THBS3-210ENST00000541576 PLEKHM2Q8IWE5 1019 aa10.73□□□□□ -0.69
THBS3-210ENST00000541576 NUP98P52948 1817 aa10.72□□□□□ -0.69
THBS3-210ENST00000541576 RAB11FIP3O75154 756 aa10.72□□□□□ -0.69
THBS3-210ENST00000541576 TRIM37O94972 964 aa10.72□□□□□ -0.69
THBS3-210ENST00000541576 RC3H1Q5TC82 1133 aaKnown RBP10.72□□□□□ -0.69
THBS3-210ENST00000541576 RABL6Q3YEC7 729 aaPredicted RBP10.72□□□□□ -0.69
THBS3-210ENST00000541576 CAMTA2O94983 1202 aa10.71□□□□□ -0.69
THBS3-210ENST00000541576 NLRP10Q86W26 655 aa10.71□□□□□ -0.69
THBS3-210ENST00000541576 ANKRD36CQ5JPF3 1778 aa10.71□□□□□ -0.69
THBS3-210ENST00000541576 SEC24BO95487 1268 aa10.71□□□□□ -0.69
THBS3-210ENST00000541576 PCCAP05165 728 aaPredicted RBP10.71□□□□□ -0.69
THBS3-210ENST00000541576 OS9Q13438 667 aaPredicted RBP10.71□□□□□ -0.69
THBS3-210ENST00000541576 RGS17Q9UGC6 210 aaPredicted RBP10.71□□□□□ -0.69
THBS3-210ENST00000541576 ZBTB38Q8NAP3 1195 aaPredicted RBP10.71□□□□□ -0.7
THBS3-210ENST00000541576 PA2G4Q9UQ80 394 aaKnown RBP10.71□□□□□ -0.7
THBS3-210ENST00000541576 GNPATO15228 680 aa10.7□□□□□ -0.7
THBS3-210ENST00000541576 RPS6KA4O75676 772 aa10.7□□□□□ -0.7
THBS3-210ENST00000541576 LMBR1LQ6UX01 489 aa10.7□□□□□ -0.7
THBS3-210ENST00000541576 ZNF34Q8IZ26 560 aa10.7□□□□□ -0.7
THBS3-210ENST00000541576 RHPN1Q8TCX5 695 aa10.7□□□□□ -0.7
THBS3-210ENST00000541576 KIF1BPQ96EK5 621 aa10.7□□□□□ -0.7
THBS3-210ENST00000541576 FAM89AQ96GI7 184 aa10.7□□□□□ -0.7
THBS3-210ENST00000541576 FOXO4P98177 505 aa10.7□□□□□ -0.7
THBS3-210ENST00000541576 ZNF652Q9Y2D9 606 aa10.7□□□□□ -0.7
THBS3-210ENST00000541576 TAF1LQ8IZX4 1826 aa10.69□□□□□ -0.7
THBS3-210ENST00000541576 ERC1Q8IUD2 1116 aa10.69□□□□□ -0.7
THBS3-210ENST00000541576 G3BP1Q13283 466 aaKnown RBP eCLIP10.69□□□□□ -0.7
THBS3-210ENST00000541576 BMP2KLQ5H9B9 411 aa10.69□□□□□ -0.7
THBS3-210ENST00000541576 POTEAQ6S8J7 498 aa10.69□□□□□ -0.7
THBS3-210ENST00000541576 UBE2Q2Q8WVN8 375 aa10.69□□□□□ -0.7
THBS3-210ENST00000541576 IL1RAPL2Q9NP60 686 aa10.69□□□□□ -0.7
THBS3-210ENST00000541576 TRMT112Q9UI30 125 aaKnown RBP10.69□□□□□ -0.7
THBS3-210ENST00000541576 CHMP3Q9Y3E7 222 aa10.69□□□□□ -0.7
THBS3-210ENST00000541576 RTCBQ9Y3I0 505 aaKnown RBP10.69□□□□□ -0.7
THBS3-210ENST00000541576 UBN2Q6ZU65 1347 aa10.69□□□□□ -0.7
THBS3-210ENST00000541576 SLC27A3Q5K4L6 730 aa10.69□□□□□ -0.7
THBS3-210ENST00000541576 CDHR2Q9BYE9 1310 aa10.69□□□□□ -0.7
THBS3-210ENST00000541576 LRRC4BQ9NT99 713 aa10.69□□□□□ -0.7
THBS3-210ENST00000541576 GSPT1P15170 499 aaKnown RBP10.68□□□□□ -0.7
THBS3-210ENST00000541576 RFX5P48382 616 aaPredicted RBP10.68□□□□□ -0.7
THBS3-210ENST00000541576 GSE1Q14687 1217 aa10.68□□□□□ -0.7
THBS3-210ENST00000541576 PARP10Q53GL7 1025 aa10.68□□□□□ -0.7
THBS3-210ENST00000541576 CLEC4GQ6UXB4 293 aa10.68□□□□□ -0.7
THBS3-210ENST00000541576 KLHDC4Q8TBB5 520 aa10.68□□□□□ -0.7
THBS3-210ENST00000541576 PLA2G12BQ9BX93 195 aa10.68□□□□□ -0.7
THBS3-210ENST00000541576 COPRSQ9NQ92 184 aa10.68□□□□□ -0.7
THBS3-210ENST00000541576 AK7Q96M32 723 aa10.68□□□□□ -0.7
THBS3-210ENST00000541576 SIL1Q9H173 461 aa10.68□□□□□ -0.7
THBS3-210ENST00000541576 NIP7Q9Y221 180 aaKnown RBP eCLIP10.68□□□□□ -0.7
THBS3-210ENST00000541576 C4BP0C0L5 1744 aa10.68□□□□□ -0.7
THBS3-210ENST00000541576 SALL3Q9BXA9 1300 aa10.67□□□□□ -0.7
THBS3-210ENST00000541576 PTPN12Q05209 780 aaKnown RBP10.67□□□□□ -0.7
THBS3-210ENST00000541576 BCORQ6W2J9 1755 aa10.67□□□□□ -0.7
THBS3-210ENST00000541576 RGL2O15211 777 aa10.67□□□□□ -0.7
THBS3-210ENST00000541576 PDE1AP54750 535 aa10.67□□□□□ -0.7
THBS3-210ENST00000541576 TTC22Q5TAA0 569 aa10.67□□□□□ -0.7
THBS3-210ENST00000541576 TSHZ3Q63HK5 1081 aa10.67□□□□□ -0.7
THBS3-210ENST00000541576 SMIM5Q71RC9 77 aa10.67□□□□□ -0.7
THBS3-210ENST00000541576 SYNE4Q8N205 404 aa10.67□□□□□ -0.7
THBS3-210ENST00000541576 NARFQ9UHQ1 456 aa10.67□□□□□ -0.7
THBS3-210ENST00000541576 IRS4O14654 1257 aaPredicted RBP10.67□□□□□ -0.7
THBS3-210ENST00000541576 MX1P20591 662 aa10.67□□□□□ -0.7
THBS3-210ENST00000541576 NFKBIBQ15653 356 aa10.67□□□□□ -0.7
THBS3-210ENST00000541576 SUSD4Q5VX71 490 aa10.67□□□□□ -0.7
THBS3-210ENST00000541576 OSBPL3Q9H4L5 887 aa10.67□□□□□ -0.7
THBS3-210ENST00000541576 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.67□□□□□ -0.7
THBS3-210ENST00000541576 ZPR1O75312 459 aa10.66□□□□□ -0.7
THBS3-210ENST00000541576 CLASRPQ8N2M8 674 aaKnown RBP10.66□□□□□ -0.7
THBS3-210ENST00000541576 UTP14AQ9BVJ6 771 aaKnown RBP10.66□□□□□ -0.7
THBS3-210ENST00000541576 SH3TC1Q8TE82 1336 aa10.66□□□□□ -0.7
THBS3-210ENST00000541576 USPL1Q5W0Q7 1092 aa10.66□□□□□ -0.7
THBS3-210ENST00000541576 FAM177BA6PVY3 158 aa10.65□□□□□ -0.7
THBS3-210ENST00000541576 SASH1O94885 1247 aa10.65□□□□□ -0.7
THBS3-210ENST00000541576 TRAPPC3LQ5T215 181 aa10.65□□□□□ -0.7
THBS3-210ENST00000541576 AMIGO3Q86WK7 504 aa10.65□□□□□ -0.7
THBS3-210ENST00000541576 NUTM1Q86Y26 1132 aa10.65□□□□□ -0.7
THBS3-210ENST00000541576 ARHGEF1Q92888 912 aaKnown RBP10.65□□□□□ -0.7
THBS3-210ENST00000541576 PHF14O94880 888 aa10.65□□□□□ -0.7
THBS3-210ENST00000541576 APBA3O96018 575 aa10.65□□□□□ -0.7
THBS3-210ENST00000541576 CSF1RP07333 972 aa10.65□□□□□ -0.7
THBS3-210ENST00000541576 HMGB2P26583 209 aaKnown RBP10.65□□□□□ -0.7
THBS3-210ENST00000541576 TXNRD1Q16881 649 aa10.65□□□□□ -0.7
THBS3-210ENST00000541576 CCDC57Q2TAC2 916 aa10.65□□□□□ -0.7
THBS3-210ENST00000541576 SRP68Q9UHB9 627 aaKnown RBP10.65□□□□□ -0.7
THBS3-210ENST00000541576 SCN7AQ01118 1682 aa10.65□□□□□ -0.7
THBS3-210ENST00000541576 PDE8AO60658 829 aa10.65□□□□□ -0.71
THBS3-210ENST00000541576 RFC4P35249 363 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms