RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 AVENQ9NQS1 362 aaPredicted RBP7.47□□□□□ -1.21
MDM2-227ENST00000540709 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.47□□□□□ -1.21
MDM2-227ENST00000540709 ACIN1Q9UKV3 1341 aaKnown RBP7.47□□□□□ -1.21
MDM2-227ENST00000540709 FKBP5Q13451 457 aaPredicted RBP7.46□□□□□ -1.22
MDM2-227ENST00000540709 GPAT2Q6NUI2 795 aa7.46□□□□□ -1.22
MDM2-227ENST00000540709 CCDC82Q8N4S0 544 aa7.46□□□□□ -1.22
MDM2-227ENST00000540709 PBXIP1Q96AQ6 731 aa7.46□□□□□ -1.22
MDM2-227ENST00000540709 PNMA5Q96PV4 448 aa7.46□□□□□ -1.22
MDM2-227ENST00000540709 ELOA3CA0A087WX78 387 aaPredicted RBP7.45□□□□□ -1.22
MDM2-227ENST00000540709 ELOA3DA6NLF2 546 aaPredicted RBP7.45□□□□□ -1.22
MDM2-227ENST00000540709 TGFBR3LH3BV60 316 aa7.45□□□□□ -1.22
MDM2-227ENST00000540709 ATG7O95352 703 aa7.45□□□□□ -1.22
MDM2-227ENST00000540709 IDH3AP50213 366 aa7.45□□□□□ -1.22
MDM2-227ENST00000540709 SRPK2P78362 688 aaKnown RBP7.45□□□□□ -1.22
MDM2-227ENST00000540709 SWI5Q1ZZU3 235 aa7.45□□□□□ -1.22
MDM2-227ENST00000540709 ELOA3BQ3SY89 546 aa7.45□□□□□ -1.22
MDM2-227ENST00000540709 TMEM164Q5U3C3 297 aa7.45□□□□□ -1.22
MDM2-227ENST00000540709 ELOA3Q8NG57 546 aa7.45□□□□□ -1.22
MDM2-227ENST00000540709 QTRT2Q9H974 415 aaKnown RBP7.45□□□□□ -1.22
MDM2-227ENST00000540709 BCS1LQ9Y276 419 aa7.45□□□□□ -1.22
MDM2-227ENST00000540709 ELOAQ14241 798 aaKnown RBP7.44□□□□□ -1.22
MDM2-227ENST00000540709 NAA30Q147X3 362 aaPredicted RBP7.44□□□□□ -1.22
MDM2-227ENST00000540709 C11orf91Q3C1V1 193 aa7.44□□□□□ -1.22
MDM2-227ENST00000540709 KRT25Q7Z3Z0 450 aa7.44□□□□□ -1.22
MDM2-227ENST00000540709 DCAF5Q96JK2 942 aa7.44□□□□□ -1.22
MDM2-227ENST00000540709 SUV39H2Q9H5I1 410 aa7.44□□□□□ -1.22
MDM2-227ENST00000540709 SIN3BO75182 1162 aa7.43□□□□□ -1.22
MDM2-227ENST00000540709 EPB42P16452 691 aa7.43□□□□□ -1.22
MDM2-227ENST00000540709 IFT43Q96FT9 208 aa7.43□□□□□ -1.22
MDM2-227ENST00000540709 UBE2OQ9C0C9 1292 aaKnown RBP7.43□□□□□ -1.22
MDM2-227ENST00000540709 USP20Q9Y2K6 914 aa7.43□□□□□ -1.22
MDM2-227ENST00000540709 PIK3R2O00459 728 aa7.42□□□□□ -1.22
MDM2-227ENST00000540709 GNB5O14775 395 aa7.42□□□□□ -1.22
MDM2-227ENST00000540709 MICAL2O94851 1124 aa7.42□□□□□ -1.22
MDM2-227ENST00000540709 ADH7P40394 386 aa7.42□□□□□ -1.22
MDM2-227ENST00000540709 KCNQ4P56696 695 aa7.42□□□□□ -1.22
MDM2-227ENST00000540709 FAM69CQ0P6D2 419 aa7.42□□□□□ -1.22
MDM2-227ENST00000540709 IER5Q5VY09 327 aa7.42□□□□□ -1.22
MDM2-227ENST00000540709 LINC00114Q6XXX2 140 aa7.42□□□□□ -1.22
MDM2-227ENST00000540709 LRFN2Q9ULH4 789 aa7.42□□□□□ -1.22
MDM2-227ENST00000540709 HOXB4P17483 251 aaPredicted RBP7.41□□□□□ -1.22
MDM2-227ENST00000540709 NFKB1P19838 968 aa7.41□□□□□ -1.22
MDM2-227ENST00000540709 DGKGP49619 791 aa7.41□□□□□ -1.22
MDM2-227ENST00000540709 CCINQ13939 588 aa7.41□□□□□ -1.22
MDM2-227ENST00000540709 COX20Q5RI15 118 aa7.41□□□□□ -1.22
MDM2-227ENST00000540709 CAPN12Q6ZSI9 719 aa7.41□□□□□ -1.22
MDM2-227ENST00000540709 CMTR1Q8N1G2 835 aaKnown RBP7.41□□□□□ -1.22
MDM2-227ENST00000540709 SAP130Q9H0E3 1048 aa7.41□□□□□ -1.22
MDM2-227ENST00000540709 DMGDHQ9UI17 866 aaKnown RBP7.41□□□□□ -1.22
MDM2-227ENST00000540709 M0R082 166 aa7.4□□□□□ -1.22
MDM2-227ENST00000540709 COL8A1P27658 744 aa7.4□□□□□ -1.22
MDM2-227ENST00000540709 ARSDP51689 593 aa7.4□□□□□ -1.22
MDM2-227ENST00000540709 OCLNQ16625 522 aa7.4□□□□□ -1.22
MDM2-227ENST00000540709 TREML1Q86YW5 311 aa7.4□□□□□ -1.22
MDM2-227ENST00000540709 RGL4Q8IZJ4 473 aa7.4□□□□□ -1.22
MDM2-227ENST00000540709 ZNF417Q8TAU3 575 aa7.4□□□□□ -1.22
MDM2-227ENST00000540709 MYO19Q96H55 970 aa7.4□□□□□ -1.22
MDM2-227ENST00000540709 ZNF587Q96SQ5 575 aaPredicted RBP7.4□□□□□ -1.22
MDM2-227ENST00000540709 GSX2Q9BZM3 304 aa7.4□□□□□ -1.22
MDM2-227ENST00000540709 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.4□□□□□ -1.22
MDM2-227ENST00000540709 INPP5BP32019 993 aa7.39□□□□□ -1.23
MDM2-227ENST00000540709 SUZ12Q15022 739 aaKnown RBP7.39□□□□□ -1.23
MDM2-227ENST00000540709 C8orf86Q6ZUL3 223 aa7.39□□□□□ -1.23
MDM2-227ENST00000540709 NUDT8Q8WV74 236 aa7.39□□□□□ -1.23
MDM2-227ENST00000540709 PLVAPQ9BX97 442 aa7.39□□□□□ -1.23
MDM2-227ENST00000540709 C1orf115Q9H7X2 142 aa7.39□□□□□ -1.23
MDM2-227ENST00000540709 CXXC1Q9P0U4 656 aaPredicted RBP7.39□□□□□ -1.23
MDM2-227ENST00000540709 ADARB2-AS1A8MUL3 147 aa7.38□□□□□ -1.23
MDM2-227ENST00000540709 SASH3O75995 380 aa7.38□□□□□ -1.23
MDM2-227ENST00000540709 TARSP26639 723 aaKnown RBP7.38□□□□□ -1.23
MDM2-227ENST00000540709 PLA2G4EQ3MJ16 856 aa7.38□□□□□ -1.23
MDM2-227ENST00000540709 C16orf46Q6P387 395 aa7.38□□□□□ -1.23
MDM2-227ENST00000540709 TNFRSF25Q93038 417 aa7.38□□□□□ -1.23
MDM2-227ENST00000540709 ARID3AQ99856 593 aa7.38□□□□□ -1.23
MDM2-227ENST00000540709 NOP53Q9NZM5 478 aaKnown RBP7.38□□□□□ -1.23
MDM2-227ENST00000540709 RTCBQ9Y3I0 505 aaKnown RBP7.38□□□□□ -1.23
MDM2-227ENST00000540709 KRBA1A5PL33 1030 aa7.37□□□□□ -1.23
MDM2-227ENST00000540709 ALBP02768 609 aa7.37□□□□□ -1.23
MDM2-227ENST00000540709 ATP2B4P23634 1241 aa7.37□□□□□ -1.23
MDM2-227ENST00000540709 BRD2P25440 801 aaKnown RBP7.37□□□□□ -1.23
MDM2-227ENST00000540709 DNAJB12Q9NXW2 375 aaKnown RBP7.37□□□□□ -1.23
MDM2-227ENST00000540709 STARD13Q9Y3M8 1113 aa7.37□□□□□ -1.23
MDM2-227ENST00000540709 SUPT5HO00267 1087 aaKnown RBP7.36□□□□□ -1.23
MDM2-227ENST00000540709 OPLAHO14841 1288 aa7.36□□□□□ -1.23
MDM2-227ENST00000540709 RARAP10276 462 aa7.36□□□□□ -1.23
MDM2-227ENST00000540709 GRNP28799 593 aaKnown RBP7.36□□□□□ -1.23
MDM2-227ENST00000540709 MLLT1Q03111 559 aaPredicted RBP7.36□□□□□ -1.23
MDM2-227ENST00000540709 MICALL1Q8N3F8 863 aa7.36□□□□□ -1.23
MDM2-227ENST00000540709 CLP1Q92989 425 aaKnown RBP7.36□□□□□ -1.23
MDM2-227ENST00000540709 TRIM11Q96F44 468 aa7.36□□□□□ -1.23
MDM2-227ENST00000540709 SLC6A14Q9UN76 642 aa7.36□□□□□ -1.23
MDM2-227ENST00000540709 MSTNO14793 375 aa7.35□□□□□ -1.23
MDM2-227ENST00000540709 PTCD1O75127 700 aaKnown RBP7.35□□□□□ -1.23
MDM2-227ENST00000540709 XYLBO75191 536 aa7.35□□□□□ -1.23
MDM2-227ENST00000540709 CPB1P15086 417 aa7.35□□□□□ -1.23
MDM2-227ENST00000540709 ETFBKMTQ8IXQ9 262 aa7.35□□□□□ -1.23
MDM2-227ENST00000540709 JPH1Q9HDC5 661 aaPredicted RBP7.35□□□□□ -1.23
MDM2-227ENST00000540709 SLAIN2Q9P270 581 aa7.35□□□□□ -1.23
MDM2-227ENST00000540709 SEPT3Q9UH03 358 aa7.35□□□□□ -1.23
MDM2-227ENST00000540709 FAM229AH3BQW9 127 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms