RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 EIF6P56537 245 aaKnown RBP12.04□□□□□ -0.48
TRAPPC1-202ENST00000540486 ST5P78524 1137 aa12.04□□□□□ -0.48
TRAPPC1-202ENST00000540486 VSIG10Q8N0Z9 540 aa12.04□□□□□ -0.48
TRAPPC1-202ENST00000540486 CCDC24Q8N4L8 307 aa12.04□□□□□ -0.48
TRAPPC1-202ENST00000540486 CNBD1Q8NA66 436 aa12.04□□□□□ -0.48
TRAPPC1-202ENST00000540486 CIZ1Q9ULV3 898 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC1-202ENST00000540486 SLX4Q8IY92 1834 aa12.03□□□□□ -0.48
TRAPPC1-202ENST00000540486 CHRM1P11229 460 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC1-202ENST00000540486 EPS15P42566 896 aa12.03□□□□□ -0.48
TRAPPC1-202ENST00000540486 AKAP4Q5JQC9 854 aa12.03□□□□□ -0.48
TRAPPC1-202ENST00000540486 AMER1Q5JTC6 1135 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC1-202ENST00000540486 SETDB2Q96T68 719 aa12.03□□□□□ -0.48
TRAPPC1-202ENST00000540486 POLKQ9UBT6 870 aa12.03□□□□□ -0.48
TRAPPC1-202ENST00000540486 NPR1P16066 1061 aa12.02□□□□□ -0.49
TRAPPC1-202ENST00000540486 CANXP27824 592 aaKnown RBP12.02□□□□□ -0.49
TRAPPC1-202ENST00000540486 SCNN1DP51172 638 aa12.02□□□□□ -0.49
TRAPPC1-202ENST00000540486 CTU1Q7Z7A3 348 aaKnown RBP12.02□□□□□ -0.49
TRAPPC1-202ENST00000540486 SYNE4Q8N205 404 aa12.02□□□□□ -0.49
TRAPPC1-202ENST00000540486 GJA3Q9Y6H8 435 aa12.02□□□□□ -0.49
TRAPPC1-202ENST00000540486 ANKRD31Q8N7Z5 1873 aa12.02□□□□□ -0.49
TRAPPC1-202ENST00000540486 PER1O15534 1290 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC1-202ENST00000540486 STARD3NLO95772 234 aa12.01□□□□□ -0.49
TRAPPC1-202ENST00000540486 CLCN6P51797 869 aa12.01□□□□□ -0.49
TRAPPC1-202ENST00000540486 PKN2Q16513 984 aaKnown RBP12.01□□□□□ -0.49
TRAPPC1-202ENST00000540486 PSMD1Q99460 953 aa12.01□□□□□ -0.49
TRAPPC1-202ENST00000540486 SLC52A2Q9HAB3 445 aa12.01□□□□□ -0.49
TRAPPC1-202ENST00000540486 TRPM7Q96QT4 1865 aa12□□□□□ -0.49
TRAPPC1-202ENST00000540486 KLRG2A4D1S0 409 aaPredicted RBP12□□□□□ -0.49
TRAPPC1-202ENST00000540486 ALDH1B1P30837 517 aa11.99□□□□□ -0.49
TRAPPC1-202ENST00000540486 ZIC5Q96T25 663 aa11.99□□□□□ -0.49
TRAPPC1-202ENST00000540486 ADARB2Q9NS39 739 aaKnown RBP11.99□□□□□ -0.49
TRAPPC1-202ENST00000540486 PGAP2Q9UHJ9 254 aa11.99□□□□□ -0.49
TRAPPC1-202ENST00000540486 HPS5Q9UPZ3 1129 aa11.99□□□□□ -0.49
TRAPPC1-202ENST00000540486 COL11A2P13942 1736 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC1-202ENST00000540486 ZEB1P37275 1124 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC1-202ENST00000540486 FXR1P51114 621 aaKnown RBP eCLIP11.98□□□□□ -0.49
TRAPPC1-202ENST00000540486 SLC39A6Q13433 755 aa11.98□□□□□ -0.49
TRAPPC1-202ENST00000540486 CC2D2BQ6DHV5 1058 aa11.98□□□□□ -0.49
TRAPPC1-202ENST00000540486 ZC3H15Q8WU90 426 aaKnown RBP11.98□□□□□ -0.49
TRAPPC1-202ENST00000540486 TBC1D2BQ9UPU7 963 aa11.98□□□□□ -0.49
TRAPPC1-202ENST00000540486 ANKRD26Q9UPS8 1709 aa11.97□□□□□ -0.49
TRAPPC1-202ENST00000540486 DLL1O00548 723 aa11.97□□□□□ -0.49
TRAPPC1-202ENST00000540486 TRPA1O75762 1119 aa11.97□□□□□ -0.49
TRAPPC1-202ENST00000540486 HUNKP57058 714 aa11.97□□□□□ -0.49
TRAPPC1-202ENST00000540486 GRIPAP1Q4V328 841 aa11.97□□□□□ -0.49
TRAPPC1-202ENST00000540486 OLFM4Q6UX06 510 aa11.97□□□□□ -0.49
TRAPPC1-202ENST00000540486 NPM2Q86SE8 214 aaKnown RBP11.97□□□□□ -0.49
TRAPPC1-202ENST00000540486 CCDC102AQ96A19 550 aa11.97□□□□□ -0.49
TRAPPC1-202ENST00000540486 KIF12Q96FN5 646 aa11.97□□□□□ -0.49
TRAPPC1-202ENST00000540486 TEX13AQ9BXU3 409 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC1-202ENST00000540486 RNF186Q9NXI6 227 aa11.97□□□□□ -0.49
TRAPPC1-202ENST00000540486 ARFGEF2Q9Y6D5 1785 aa11.97□□□□□ -0.49
TRAPPC1-202ENST00000540486 KIF20BQ96Q89 1820 aa11.96□□□□□ -0.49
TRAPPC1-202ENST00000540486 IL6STP40189 918 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC1-202ENST00000540486 CDC37L1Q7L3B6 337 aa11.96□□□□□ -0.49
TRAPPC1-202ENST00000540486 PHF12Q96QT6 1004 aa11.96□□□□□ -0.49
TRAPPC1-202ENST00000540486 GLIS2Q9BZE0 524 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC1-202ENST00000540486 GPRC5DQ9NZD1 345 aa11.96□□□□□ -0.49
TRAPPC1-202ENST00000540486 FAM155AB1AL88 458 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC1-202ENST00000540486 KIF23Q02241 960 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC1-202ENST00000540486 RGMBQ6NW40 437 aa11.95□□□□□ -0.5
TRAPPC1-202ENST00000540486 NBPF5PQ86XG9 351 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC1-202ENST00000540486 ZNF408Q9H9D4 720 aa11.95□□□□□ -0.5
TRAPPC1-202ENST00000540486 RTN4Q9NQC3 1192 aaKnown RBP11.95□□□□□ -0.5
TRAPPC1-202ENST00000540486 KNSTRNQ9Y448 316 aa11.95□□□□□ -0.5
TRAPPC1-202ENST00000540486 CAMTA2O94983 1202 aa11.94□□□□□ -0.5
TRAPPC1-202ENST00000540486 CLEC4GQ6UXB4 293 aa11.94□□□□□ -0.5
TRAPPC1-202ENST00000540486 TPTE2Q6XPS3 522 aa11.94□□□□□ -0.5
TRAPPC1-202ENST00000540486 LARGE2Q8N3Y3 721 aa11.94□□□□□ -0.5
TRAPPC1-202ENST00000540486 LGR6Q9HBX8 967 aa11.94□□□□□ -0.5
TRAPPC1-202ENST00000540486 RNMTO43148 476 aaKnown RBP11.93□□□□□ -0.5
TRAPPC1-202ENST00000540486 PYGBP11216 843 aa11.93□□□□□ -0.5
TRAPPC1-202ENST00000540486 SP7Q8TDD2 431 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC1-202ENST00000540486 ZNF330Q9Y3S2 320 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC1-202ENST00000540486 TNNT2P45379 298 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC1-202ENST00000540486 AEBP1Q8IUX7 1158 aa11.92□□□□□ -0.5
TRAPPC1-202ENST00000540486 TTC5Q8N0Z6 440 aa11.92□□□□□ -0.5
TRAPPC1-202ENST00000540486 VPS33BQ9H267 617 aa11.92□□□□□ -0.5
TRAPPC1-202ENST00000540486 HDAC9Q9UKV0 1011 aa11.92□□□□□ -0.5
TRAPPC1-202ENST00000540486 SNED1Q8TER0 1413 aa11.92□□□□□ -0.5
TRAPPC1-202ENST00000540486 CACNA1SQ13698 1873 aa11.91□□□□□ -0.5
TRAPPC1-202ENST00000540486 SULT6B1Q6IMI4 303 aa11.91□□□□□ -0.5
TRAPPC1-202ENST00000540486 MORC1Q86VD1 984 aa11.91□□□□□ -0.5
TRAPPC1-202ENST00000540486 NIM1KQ8IY84 436 aa11.91□□□□□ -0.5
TRAPPC1-202ENST00000540486 CSRNP1Q96S65 589 aa11.91□□□□□ -0.5
TRAPPC1-202ENST00000540486 CDHR2Q9BYE9 1310 aa11.9□□□□□ -0.5
TRAPPC1-202ENST00000540486 MAP3K13O43283 966 aa11.9□□□□□ -0.5
TRAPPC1-202ENST00000540486 ECM2O94769 699 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC1-202ENST00000540486 ZNF157P51786 506 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC1-202ENST00000540486 CC2D1BQ5T0F9 858 aaKnown RBP11.9□□□□□ -0.5
TRAPPC1-202ENST00000540486 FBXO46Q6PJ61 603 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC1-202ENST00000540486 DZIP3Q86Y13 1208 aaKnown RBP11.9□□□□□ -0.5
TRAPPC1-202ENST00000540486 C2orf69Q8N8R5 385 aa11.9□□□□□ -0.5
TRAPPC1-202ENST00000540486 ZNF652Q9Y2D9 606 aa11.9□□□□□ -0.5
TRAPPC1-202ENST00000540486 SCN11AQ9UI33 1791 aa11.9□□□□□ -0.51
TRAPPC1-202ENST00000540486 MRC1P22897 1456 aa11.89□□□□□ -0.51
TRAPPC1-202ENST00000540486 RGL2O15211 777 aa11.89□□□□□ -0.51
TRAPPC1-202ENST00000540486 USP48Q86UV5 1035 aa11.89□□□□□ -0.51
TRAPPC1-202ENST00000540486 SLC17A8Q8NDX2 589 aa11.89□□□□□ -0.51
TRAPPC1-202ENST00000540486 GBA2Q9HCG7 927 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms