RNA–Protein interactions for RNA: ENST00000540086.5

CDH19-203, Transcript of cadherin 19, humanhuman

TSL 2 BASIC

Gene CDH19, Length 1,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-203ENST00000540086 ARFGEF2Q9Y6D5 1785 aa8.57□□□□□ -1.04
CDH19-203ENST00000540086 TRIM28Q13263 835 aaKnown RBP8.57□□□□□ -1.04
CDH19-203ENST00000540086 HSP90AB3PQ58FF7 597 aa8.57□□□□□ -1.04
CDH19-203ENST00000540086 RC3H1Q5TC82 1133 aaKnown RBP8.57□□□□□ -1.04
CDH19-203ENST00000540086 NLRP10Q86W26 655 aa8.57□□□□□ -1.04
CDH19-203ENST00000540086 CICQ96RK0 1608 aaPredicted RBP8.57□□□□□ -1.04
CDH19-203ENST00000540086 SURF6O75683 361 aaKnown RBP8.57□□□□□ -1.04
CDH19-203ENST00000540086 MYCNP04198 464 aaPredicted RBP8.57□□□□□ -1.04
CDH19-203ENST00000540086 AMIGO3Q86WK7 504 aa8.57□□□□□ -1.04
CDH19-203ENST00000540086 FAM89AQ96GI7 184 aa8.57□□□□□ -1.04
CDH19-203ENST00000540086 ZBTB47Q9UFB7 747 aaPredicted RBP8.57□□□□□ -1.04
CDH19-203ENST00000540086 PA2G4Q9UQ80 394 aaKnown RBP8.57□□□□□ -1.04
CDH19-203ENST00000540086 NUP188Q5SRE5 1749 aa8.57□□□□□ -1.04
CDH19-203ENST00000540086 RPS6KA4O75676 772 aa8.56□□□□□ -1.04
CDH19-203ENST00000540086 BRWD3Q6RI45 1802 aa8.56□□□□□ -1.04
CDH19-203ENST00000540086 UBN2Q6ZU65 1347 aa8.56□□□□□ -1.04
CDH19-203ENST00000540086 C16orf71Q8IYS4 520 aaPredicted RBP8.56□□□□□ -1.04
CDH19-203ENST00000540086 ZNF34Q8IZ26 560 aa8.56□□□□□ -1.04
CDH19-203ENST00000540086 SYNE4Q8N205 404 aa8.56□□□□□ -1.04
CDH19-203ENST00000540086 OTUD7AQ8TE49 926 aaPredicted RBP8.56□□□□□ -1.04
CDH19-203ENST00000540086 EP400Q96L91 3159 aa8.56□□□□□ -1.04
CDH19-203ENST00000540086 FAM177BA6PVY3 158 aa8.55□□□□□ -1.04
CDH19-203ENST00000540086 PHF14O94880 888 aa8.55□□□□□ -1.04
CDH19-203ENST00000540086 APBA3O96018 575 aa8.55□□□□□ -1.04
CDH19-203ENST00000540086 PCCAP05165 728 aaPredicted RBP8.55□□□□□ -1.04
CDH19-203ENST00000540086 FOXO4P98177 505 aa8.55□□□□□ -1.04
CDH19-203ENST00000540086 RABL6Q3YEC7 729 aaPredicted RBP8.55□□□□□ -1.04
CDH19-203ENST00000540086 SLC27A3Q5K4L6 730 aa8.55□□□□□ -1.04
CDH19-203ENST00000540086 LMBR1LQ6UX01 489 aa8.55□□□□□ -1.04
CDH19-203ENST00000540086 ZBTB38Q8NAP3 1195 aaPredicted RBP8.55□□□□□ -1.04
CDH19-203ENST00000540086 KLHDC4Q8TBB5 520 aa8.55□□□□□ -1.04
CDH19-203ENST00000540086 AK7Q96M32 723 aa8.55□□□□□ -1.04
CDH19-203ENST00000540086 LRRCC1Q9C099 1032 aa8.55□□□□□ -1.04
CDH19-203ENST00000540086 SRP68Q9UHB9 627 aaKnown RBP8.55□□□□□ -1.04
CDH19-203ENST00000540086 TRMT112Q9UI30 125 aaKnown RBP8.55□□□□□ -1.04
CDH19-203ENST00000540086 CHMP3Q9Y3E7 222 aa8.55□□□□□ -1.04
CDH19-203ENST00000540086 RTCBQ9Y3I0 505 aaKnown RBP8.55□□□□□ -1.04
CDH19-203ENST00000540086 RREB1Q92766 1687 aa8.55□□□□□ -1.04
CDH19-203ENST00000540086 OS9Q13438 667 aaPredicted RBP8.55□□□□□ -1.04
CDH19-203ENST00000540086 TXNRD1Q16881 649 aa8.55□□□□□ -1.04
CDH19-203ENST00000540086 PROM2Q8N271 834 aa8.55□□□□□ -1.04
CDH19-203ENST00000540086 NIP7Q9Y221 180 aaKnown RBP eCLIP8.55□□□□□ -1.04
CDH19-203ENST00000540086 COL5A3P25940 1745 aaPredicted RBP8.54□□□□□ -1.04
CDH19-203ENST00000540086 RAB11FIP3O75154 756 aa8.54□□□□□ -1.04
CDH19-203ENST00000540086 SUSD4Q5VX71 490 aa8.54□□□□□ -1.04
CDH19-203ENST00000540086 USPL1Q5W0Q7 1092 aa8.54□□□□□ -1.04
CDH19-203ENST00000540086 ARHGEF1Q92888 912 aaKnown RBP8.54□□□□□ -1.04
CDH19-203ENST00000540086 SIL1Q9H173 461 aa8.54□□□□□ -1.04
CDH19-203ENST00000540086 IL1RAPL2Q9NP60 686 aa8.54□□□□□ -1.04
CDH19-203ENST00000540086 ZNF652Q9Y2D9 606 aa8.54□□□□□ -1.04
CDH19-203ENST00000540086 NOP58Q9Y2X3 529 aaKnown RBP8.54□□□□□ -1.04
CDH19-203ENST00000540086 ZNF831Q5JPB2 1677 aa8.54□□□□□ -1.04
CDH19-203ENST00000540086 SBF2Q86WG5 1849 aa8.54□□□□□ -1.04
CDH19-203ENST00000540086 MYH14Q7Z406 1995 aaKnown RBP8.54□□□□□ -1.04
CDH19-203ENST00000540086 ZPR1O75312 459 aa8.53□□□□□ -1.04
CDH19-203ENST00000540086 RFX5P48382 616 aaPredicted RBP8.53□□□□□ -1.04
CDH19-203ENST00000540086 BICDL1Q6ZP65 573 aa8.53□□□□□ -1.04
CDH19-203ENST00000540086 PLEKHM2Q8IWE5 1019 aa8.53□□□□□ -1.04
CDH19-203ENST00000540086 RHPN1Q8TCX5 695 aa8.53□□□□□ -1.04
CDH19-203ENST00000540086 CCDC85AQ96PX6 553 aaPredicted RBP8.53□□□□□ -1.04
CDH19-203ENST00000540086 BCL2L12Q9HB09 334 aa8.53□□□□□ -1.04
CDH19-203ENST00000540086 NARFQ9UHQ1 456 aa8.53□□□□□ -1.04
CDH19-203ENST00000540086 IRS4O14654 1257 aaPredicted RBP8.53□□□□□ -1.04
CDH19-203ENST00000540086 FAM161AQ3B820 660 aa8.53□□□□□ -1.04
CDH19-203ENST00000540086 C8orf34Q49A92 452 aa8.53□□□□□ -1.04
CDH19-203ENST00000540086 PARP10Q53GL7 1025 aa8.53□□□□□ -1.04
CDH19-203ENST00000540086 HSP90AB4PQ58FF6 505 aa8.53□□□□□ -1.04
CDH19-203ENST00000540086 TRAPPC3LQ5T215 181 aa8.53□□□□□ -1.04
CDH19-203ENST00000540086 CLEC4GQ6UXB4 293 aa8.53□□□□□ -1.04
CDH19-203ENST00000540086 UTP14AQ9BVJ6 771 aaKnown RBP8.53□□□□□ -1.04
CDH19-203ENST00000540086 BACH2Q9BYV9 841 aa8.53□□□□□ -1.04
CDH19-203ENST00000540086 CDHR2Q9BYE9 1310 aa8.52□□□□□ -1.05
CDH19-203ENST00000540086 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.52□□□□□ -1.05
CDH19-203ENST00000540086 PLSCR1O15162 318 aa8.52□□□□□ -1.05
CDH19-203ENST00000540086 RFC4P35249 363 aa8.52□□□□□ -1.05
CDH19-203ENST00000540086 PTPN12Q05209 780 aaKnown RBP8.52□□□□□ -1.05
CDH19-203ENST00000540086 G3BP1Q13283 466 aaKnown RBP eCLIP8.52□□□□□ -1.05
CDH19-203ENST00000540086 TSHZ3Q63HK5 1081 aa8.52□□□□□ -1.05
CDH19-203ENST00000540086 TBC1D9BQ66K14 1250 aa8.52□□□□□ -1.05
CDH19-203ENST00000540086 KIF1BPQ96EK5 621 aa8.52□□□□□ -1.05
CDH19-203ENST00000540086 PLA2G12BQ9BX93 195 aa8.52□□□□□ -1.05
CDH19-203ENST00000540086 LY75O60449 1722 aa8.52□□□□□ -1.05
CDH19-203ENST00000540086 SH3TC1Q8TE82 1336 aa8.52□□□□□ -1.05
CDH19-203ENST00000540086 USP42Q9H9J4 1324 aaKnown RBP8.52□□□□□ -1.05
CDH19-203ENST00000540086 NTSR2O95665 410 aa8.52□□□□□ -1.05
CDH19-203ENST00000540086 HCLS1P14317 486 aaPredicted RBP8.52□□□□□ -1.05
CDH19-203ENST00000540086 CTSWP56202 376 aa8.52□□□□□ -1.05
CDH19-203ENST00000540086 NUTM1Q86Y26 1132 aa8.52□□□□□ -1.05
CDH19-203ENST00000540086 COPRSQ9NQ92 184 aa8.52□□□□□ -1.05
CDH19-203ENST00000540086 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.52□□□□□ -1.05
CDH19-203ENST00000540086 C4BP0C0L5 1744 aa8.51□□□□□ -1.05
CDH19-203ENST00000540086 AFDNP55196 1824 aaKnown RBP8.51□□□□□ -1.05
CDH19-203ENST00000540086 SASH1O94885 1247 aa8.51□□□□□ -1.05
CDH19-203ENST00000540086 CSF1RP07333 972 aa8.51□□□□□ -1.05
CDH19-203ENST00000540086 ERC1Q8IUD2 1116 aa8.51□□□□□ -1.05
CDH19-203ENST00000540086 ZNF594Q96JF6 807 aaPredicted RBP8.51□□□□□ -1.05
CDH19-203ENST00000540086 RBM19Q9Y4C8 960 aaKnown RBP8.51□□□□□ -1.05
CDH19-203ENST00000540086 SALL3Q9BXA9 1300 aa8.5□□□□□ -1.05
CDH19-203ENST00000540086 RGL2O15211 777 aa8.5□□□□□ -1.05
CDH19-203ENST00000540086 PDE8AO60658 829 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms