RNA–Protein interactions for RNA: ENST00000540083.1

NECAP1-204, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-204ENST00000540083 IFNL2Q8IZJ0 200 aa9.55□□□□□ -0.88
NECAP1-204ENST00000540083 MAP7D2Q96T17 732 aa9.55□□□□□ -0.88
NECAP1-204ENST00000540083 MRS2Q9HD23 443 aa9.55□□□□□ -0.88
NECAP1-204ENST00000540083 DISP2A7MBM2 1401 aa9.55□□□□□ -0.88
NECAP1-204ENST00000540083 MAPK8IP3Q9UPT6 1336 aa9.55□□□□□ -0.88
NECAP1-204ENST00000540083 PARP4Q9UKK3 1724 aaKnown RBP9.54□□□□□ -0.88
NECAP1-204ENST00000540083 PDIA4P13667 645 aaKnown RBP9.54□□□□□ -0.88
NECAP1-204ENST00000540083 TJAP1Q5JTD0 557 aa9.54□□□□□ -0.88
NECAP1-204ENST00000540083 USHBP1Q8N6Y0 703 aa9.54□□□□□ -0.88
NECAP1-204ENST00000540083 PRR14Q9BWN1 585 aa9.54□□□□□ -0.88
NECAP1-204ENST00000540083 PDCL3Q9H2J4 239 aa9.54□□□□□ -0.88
NECAP1-204ENST00000540083 TNS2Q63HR2 1409 aa9.54□□□□□ -0.88
NECAP1-204ENST00000540083 COL3A1P02461 1466 aaPredicted RBP9.53□□□□□ -0.88
NECAP1-204ENST00000540083 THSD7AQ9UPZ6 1657 aa9.53□□□□□ -0.88
NECAP1-204ENST00000540083 SLC10A3P09131 477 aa9.53□□□□□ -0.88
NECAP1-204ENST00000540083 HMOX1P09601 288 aa9.53□□□□□ -0.88
NECAP1-204ENST00000540083 RBM10P98175 930 aaKnown RBP9.53□□□□□ -0.88
NECAP1-204ENST00000540083 DDX54Q8TDD1 881 aaKnown RBP9.53□□□□□ -0.88
NECAP1-204ENST00000540083 NLRP7Q8WX94 980 aa9.53□□□□□ -0.88
NECAP1-204ENST00000540083 RGS12O14924 1447 aa9.53□□□□□ -0.88
NECAP1-204ENST00000540083 BCL9O00512 1426 aa9.52□□□□□ -0.89
NECAP1-204ENST00000540083 HTATSF1O43719 755 aaKnown RBP9.52□□□□□ -0.89
NECAP1-204ENST00000540083 LMOD3Q0VAK6 560 aa9.52□□□□□ -0.89
NECAP1-204ENST00000540083 TAF7LQ5H9L4 462 aa9.52□□□□□ -0.89
NECAP1-204ENST00000540083 AKAP4Q5JQC9 854 aa9.52□□□□□ -0.89
NECAP1-204ENST00000540083 B4GALNT3Q6L9W6 998 aa9.52□□□□□ -0.89
NECAP1-204ENST00000540083 NGEFQ8N5V2 710 aa9.52□□□□□ -0.89
NECAP1-204ENST00000540083 ZC3H15Q8WU90 426 aaKnown RBP9.52□□□□□ -0.89
NECAP1-204ENST00000540083 RTF1Q92541 710 aaKnown RBP9.52□□□□□ -0.89
NECAP1-204ENST00000540083 MTRQ99707 1265 aa9.52□□□□□ -0.89
NECAP1-204ENST00000540083 ZMYND10O75800 440 aa9.51□□□□□ -0.89
NECAP1-204ENST00000540083 PRKAR2BP31323 418 aa9.51□□□□□ -0.89
NECAP1-204ENST00000540083 ZNF530Q6P9A1 599 aaPredicted RBP9.51□□□□□ -0.89
NECAP1-204ENST00000540083 RUNDC1Q96C34 613 aa9.51□□□□□ -0.89
NECAP1-204ENST00000540083 DCAF5Q96JK2 942 aa9.51□□□□□ -0.89
NECAP1-204ENST00000540083 IL21Q9HBE4 155 aa9.51□□□□□ -0.89
NECAP1-204ENST00000540083 ISY1Q9ULR0 285 aaKnown RBP9.51□□□□□ -0.89
NECAP1-204ENST00000540083 WNK3Q9BYP7 1800 aa9.51□□□□□ -0.89
NECAP1-204ENST00000540083 RGPD1P0DJD0 1748 aa9.51□□□□□ -0.89
NECAP1-204ENST00000540083 RGPD2P0DJD1 1756 aa9.5□□□□□ -0.89
NECAP1-204ENST00000540083 ERVV-2B6SEH9 535 aa9.5□□□□□ -0.89
NECAP1-204ENST00000540083 TERF1P54274 439 aa9.5□□□□□ -0.89
NECAP1-204ENST00000540083 NFKBIBQ15653 356 aa9.5□□□□□ -0.89
NECAP1-204ENST00000540083 FRAT1Q92837 279 aaPredicted RBP9.5□□□□□ -0.89
NECAP1-204ENST00000540083 CCDC102AQ96A19 550 aa9.5□□□□□ -0.89
NECAP1-204ENST00000540083 MEGF6O75095 1541 aa9.5□□□□□ -0.89
NECAP1-204ENST00000540083 GNAT3A8MTJ3 354 aa9.49□□□□□ -0.89
NECAP1-204ENST00000540083 CFHP08603 1231 aa9.49□□□□□ -0.89
NECAP1-204ENST00000540083 PHKG2P15735 406 aa9.49□□□□□ -0.89
NECAP1-204ENST00000540083 KMT5BQ4FZB7 885 aa9.49□□□□□ -0.89
NECAP1-204ENST00000540083 AEBP1Q8IUX7 1158 aa9.49□□□□□ -0.89
NECAP1-204ENST00000540083 KRI1Q8N9T8 703 aaKnown RBP9.49□□□□□ -0.89
NECAP1-204ENST00000540083 MARCH10Q8NA82 808 aaPredicted RBP9.49□□□□□ -0.89
NECAP1-204ENST00000540083 PNISRQ8TF01 805 aaKnown RBP9.49□□□□□ -0.89
NECAP1-204ENST00000540083 BACH2Q9BYV9 841 aa9.49□□□□□ -0.89
NECAP1-204ENST00000540083 LRRC37A3O60309 1634 aa9.49□□□□□ -0.89
NECAP1-204ENST00000540083 VIRMAQ69YN4 1812 aaKnown RBP9.48□□□□□ -0.89
NECAP1-204ENST00000540083 ACTN4O43707 911 aaKnown RBP9.48□□□□□ -0.89
NECAP1-204ENST00000540083 BAG6P46379 1132 aa9.48□□□□□ -0.89
NECAP1-204ENST00000540083 MTERF4Q7Z6M4 381 aaKnown RBP9.48□□□□□ -0.89
NECAP1-204ENST00000540083 SULF1Q8IWU6 871 aa9.48□□□□□ -0.89
NECAP1-204ENST00000540083 ARXQ96QS3 562 aa9.48□□□□□ -0.89
NECAP1-204ENST00000540083 ADAMTS8Q9UP79 889 aa9.48□□□□□ -0.89
NECAP1-204ENST00000540083 PCDHB3Q9Y5E6 796 aa9.48□□□□□ -0.89
NECAP1-204ENST00000540083 PKD1L3Q7Z443 1732 aa9.48□□□□□ -0.89
NECAP1-204ENST00000540083 DDX11L8A8MPP1 907 aa9.47□□□□□ -0.89
NECAP1-204ENST00000540083 CYP27B1O15528 508 aa9.47□□□□□ -0.89
NECAP1-204ENST00000540083 CABP4P57796 275 aa9.47□□□□□ -0.89
NECAP1-204ENST00000540083 NFE2L2Q16236 605 aa9.47□□□□□ -0.89
NECAP1-204ENST00000540083 MTHFSDQ2M296 383 aaKnown RBP9.47□□□□□ -0.89
NECAP1-204ENST00000540083 ZNF516Q92618 1163 aa9.47□□□□□ -0.89
NECAP1-204ENST00000540083 SMARCC1Q92922 1105 aaPredicted RBP9.47□□□□□ -0.89
NECAP1-204ENST00000540083 PLEKHF1Q96S99 279 aa9.47□□□□□ -0.89
NECAP1-204ENST00000540083 TMOD3Q9NYL9 352 aa9.47□□□□□ -0.89
NECAP1-204ENST00000540083 COPS2P61201 443 aa9.46□□□□□ -0.9
NECAP1-204ENST00000540083 TEFQ10587 303 aa9.46□□□□□ -0.9
NECAP1-204ENST00000540083 RDH13Q8NBN7 331 aa9.46□□□□□ -0.9
NECAP1-204ENST00000540083 SYTL4Q96C24 671 aaPredicted RBP9.46□□□□□ -0.9
NECAP1-204ENST00000540083 PRDM4Q9UKN5 801 aa9.46□□□□□ -0.9
NECAP1-204ENST00000540083 BRWD3Q6RI45 1802 aa9.46□□□□□ -0.9
NECAP1-204ENST00000540083 MAP3K5Q99683 1374 aa9.46□□□□□ -0.9
NECAP1-204ENST00000540083 PLSCR1O15162 318 aa9.45□□□□□ -0.9
NECAP1-204ENST00000540083 TRIM37O94972 964 aa9.45□□□□□ -0.9
NECAP1-204ENST00000540083 TMPOP42166 694 aaKnown RBP9.45□□□□□ -0.9
NECAP1-204ENST00000540083 RIPK4P57078 832 aa9.45□□□□□ -0.9
NECAP1-204ENST00000540083 ILDR2Q71H61 639 aa9.45□□□□□ -0.9
NECAP1-204ENST00000540083 SMAP1Q8IYB5 467 aaPredicted RBP9.45□□□□□ -0.9
NECAP1-204ENST00000540083 FAM9BQ8IZU0 186 aa9.45□□□□□ -0.9
NECAP1-204ENST00000540083 SOCS7O14512 581 aa9.44□□□□□ -0.9
NECAP1-204ENST00000540083 RNMTO43148 476 aaKnown RBP9.44□□□□□ -0.9
NECAP1-204ENST00000540083 ZPR1O75312 459 aa9.44□□□□□ -0.9
NECAP1-204ENST00000540083 APBA3O96018 575 aa9.44□□□□□ -0.9
NECAP1-204ENST00000540083 MDM2Q00987 491 aaPredicted RBP9.44□□□□□ -0.9
NECAP1-204ENST00000540083 BLOC1S3Q6QNY0 202 aa9.44□□□□□ -0.9
NECAP1-204ENST00000540083 PHACTR3Q96KR7 559 aa9.44□□□□□ -0.9
NECAP1-204ENST00000540083 CHMP4AQ9BY43 222 aa9.44□□□□□ -0.9
NECAP1-204ENST00000540083 BABAM1Q9NWV8 329 aa9.44□□□□□ -0.9
NECAP1-204ENST00000540083 LAS1LQ9Y4W2 734 aaKnown RBP9.44□□□□□ -0.9
NECAP1-204ENST00000540083 KAT6BQ8WYB5 2073 aa9.44□□□□□ -0.9
NECAP1-204ENST00000540083 RGS20O76081 388 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms